Gene annotation
Transcriptome id Sobic.001G415000.1
Synonym Sb01g039080
Functional annotation expressed protein
UniProt C5WPA6
Pfam PF13398
Panther DB PTHR33979 PTHR33979:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G67060 : -
RAP-DB (Rice) LOC_Os02g12870.1 : expressed protein
MaizeGDB (Corn) Zm00025a001894 , Zm00025a052727
Brachypodium KQK22282 , KQK22281 , PNT77635 , PNT77634
Barley HORVU4Hr1G058550.1 , HORVU4Hr1G058550.2
Wheat TraesCS4D02G203700 , TraesCS4D02G203700 , TraesCS4A02G101800 , TraesCS4B02G202800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G083266 - K00326: cytochrome-b5 reductase
2 Sobic.001G440700 ribosomal protein L7Ae, putative, expressed K12845: SNU13, U4/U6 small nuclear ribonucleoprotein SNU13
3 Sobic.006G264300 GA18008-PA, putative, expressed -
4 Sobic.004G020000 translation initiation factor eIF3 subunit, putative, expressed K03245: translation initiation factor 3 subunit J
5 Sobic.010G026700 cornichon protein, putative, expressed -
6 Sobic.002G202300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1
7 Sobic.002G385900 DCN1, putative, expressed K17822: DCN1-like protein 1/2
8 Sobic.001G040800 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
9 Sobic.001G224400 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E
10 Sobic.001G311100 ubiquitin family protein, putative, expressed K04523: UBQLN, ubiquilin
11 Sobic.006G062800 OTU-like cysteine protease family protein, putative, expressed -
12 Sobic.009G149400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K15849: PAT, bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase
13 Sobic.002G261900 arabinogalactan protein, putative, expressed -
14 Sobic.001G358300 SNARE associated Golgi protein, putative, expressed -
15 Sobic.003G367451 - K08516: synaptobrevin homolog YKT6
16 Sobic.003G023000 CID11, putative, expressed -
17 Sobic.010G188100 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
18 Sobic.002G214900 polygalacturonase, putative, expressed -
19 Sobic.005G034400 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
20 Sobic.007G114200 alpha-soluble NSF attachment protein, putative, expressed K15296: NAPA, SNAPA, alpha-soluble NSF attachment protein


Gene co-expression network
sample Sobic001G415000 Sobic001G415000 Sobic002G083266 Sobic002G083266 Sobic001G415000--Sobic002G083266 Sobic001G440700 Sobic001G440700 Sobic001G415000--Sobic001G440700 Sobic006G264300 Sobic006G264300 Sobic001G415000--Sobic006G264300 Sobic004G020000 Sobic004G020000 Sobic001G415000--Sobic004G020000 Sobic010G026700 Sobic010G026700 Sobic001G415000--Sobic010G026700 Sobic002G202300 Sobic002G202300 Sobic001G415000--Sobic002G202300 Sobic002G385900 Sobic002G385900 Sobic001G415000--Sobic002G385900 Sobic001G040800 Sobic001G040800 Sobic001G415000--Sobic001G040800 Sobic001G224400 Sobic001G224400 Sobic001G415000--Sobic001G224400 Sobic003G367451 Sobic003G367451 Sobic002G083266--Sobic003G367451 Sobic002G083266--Sobic006G264300 Sobic002G083266--Sobic001G415000 Sobic009G111600 Sobic009G111600 Sobic002G083266--Sobic009G111600 Sobic002G083266--Sobic001G224400 Sobic006G062800 Sobic006G062800 Sobic002G083266--Sobic006G062800 Sobic002G261900 Sobic002G261900 Sobic002G083266--Sobic002G261900 Sobic010G213400 Sobic010G213400 Sobic002G083266--Sobic010G213400 Sobic004G272800 Sobic004G272800 Sobic002G083266--Sobic004G272800 Sobic010G101500 Sobic010G101500 Sobic001G440700--Sobic010G101500 Sobic001G440700--Sobic001G415000 Sobic001G440700--Sobic004G020000 Sobic001G440700--Sobic001G040800 Sobic004G321900 Sobic004G321900 Sobic001G440700--Sobic004G321900 Sobic004G061800 Sobic004G061800 Sobic001G440700--Sobic004G061800 Sobic003G248600 Sobic003G248600 Sobic001G440700--Sobic003G248600 Sobic009G104000 Sobic009G104000 Sobic001G440700--Sobic009G104000 Sobic001G283500 Sobic001G283500 Sobic001G440700--Sobic001G283500 Sobic002G264400 Sobic002G264400 Sobic006G264300--Sobic002G264400 Sobic006G264300--Sobic002G083266 Sobic006G264300--Sobic002G202300 Sobic002G180600 Sobic002G180600 Sobic006G264300--Sobic002G180600 Sobic002G267500 Sobic002G267500 Sobic006G264300--Sobic002G267500 Sobic001G329100 Sobic001G329100 Sobic006G264300--Sobic001G329100 Sobic009G149400 Sobic009G149400 Sobic006G264300--Sobic009G149400 Sobic005G034400 Sobic005G034400 Sobic006G264300--Sobic005G034400 Sobic003G253000 Sobic003G253000 Sobic006G264300--Sobic003G253000 Sobic004G020000--Sobic005G034400 Sobic003G220600 Sobic003G220600 Sobic004G020000--Sobic003G220600 Sobic002G045300 Sobic002G045300 Sobic004G020000--Sobic002G045300 Sobic004G020000--Sobic002G083266 Sobic004G020000--Sobic001G440700 Sobic010G042100 Sobic010G042100 Sobic004G020000--Sobic010G042100 Sobic004G020000--Sobic006G264300 Sobic004G020000--Sobic001G415000 Sobic002G153500 Sobic002G153500 Sobic004G020000--Sobic002G153500 Sobic003G104700 Sobic003G104700 Sobic010G026700--Sobic003G104700 Sobic001G214200 Sobic001G214200 Sobic010G026700--Sobic001G214200 Sobic010G026700--Sobic002G261900 Sobic009G135600 Sobic009G135600 Sobic010G026700--Sobic009G135600 Sobic001G311100 Sobic001G311100 Sobic010G026700--Sobic001G311100 Sobic003G023000 Sobic003G023000 Sobic010G026700--Sobic003G023000 Sobic003G141700 Sobic003G141700 Sobic010G026700--Sobic003G141700 Sobic007G139700 Sobic007G139700 Sobic010G026700--Sobic007G139700 Sobic003G349300 Sobic003G349300 Sobic010G026700--Sobic003G349300 Sobic002G202300--Sobic003G253000 Sobic002G202300--Sobic003G220600 Sobic006G141500 Sobic006G141500 Sobic002G202300--Sobic006G141500 Sobic002G202300--Sobic006G264300 Sobic002G046100 Sobic002G046100 Sobic002G202300--Sobic002G046100 Sobic003G115800 Sobic003G115800 Sobic002G202300--Sobic003G115800 Sobic010G204300 Sobic010G204300 Sobic002G202300--Sobic010G204300 Sobic002G202300--Sobic006G062800 Sobic006G182100 Sobic006G182100 Sobic002G202300--Sobic006G182100 Sobic002G385900--Sobic009G135600 Sobic001G057800 Sobic001G057800 Sobic002G385900--Sobic001G057800 Sobic001G461900 Sobic001G461900 Sobic002G385900--Sobic001G461900 Sobic003G099100 Sobic003G099100 Sobic002G385900--Sobic003G099100 Sobic002G166900 Sobic002G166900 Sobic002G385900--Sobic002G166900 Sobic002G385900--Sobic010G042100 Sobic001G323000 Sobic001G323000 Sobic002G385900--Sobic001G323000 Sobic009G207000 Sobic009G207000 Sobic002G385900--Sobic009G207000 Sobic006G281800 Sobic006G281800 Sobic002G385900--Sobic006G281800 Sobic002G194100 Sobic002G194100 Sobic001G040800--Sobic002G194100 Sobic001G040800--Sobic003G253000 Sobic009G001400 Sobic009G001400 Sobic001G040800--Sobic009G001400 Sobic002G363100 Sobic002G363100 Sobic001G040800--Sobic002G363100 Sobic001G040800--Sobic002G202300 Sobic003G130800 Sobic003G130800 Sobic001G040800--Sobic003G130800 Sobic002G355300 Sobic002G355300 Sobic001G040800--Sobic002G355300 Sobic007G114200 Sobic007G114200 Sobic001G040800--Sobic007G114200 Sobic007G088000 Sobic007G088000 Sobic001G040800--Sobic007G088000 Sobic003G368500 Sobic003G368500 Sobic001G224400--Sobic003G368500 Sobic003G155400 Sobic003G155400 Sobic001G224400--Sobic003G155400 Sobic001G224400--Sobic002G153500 Sobic010G154700 Sobic010G154700 Sobic001G224400--Sobic010G154700 Sobic001G224400--Sobic010G213400 Sobic008G189300 Sobic008G189300 Sobic001G224400--Sobic008G189300 Sobic010G153100 Sobic010G153100 Sobic001G224400--Sobic010G153100 Sobic001G132100 Sobic001G132100 Sobic001G224400--Sobic001G132100 Sobic002G222900 Sobic002G222900 Sobic001G224400--Sobic002G222900
Octagon: transcription factors


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