Gene annotation
Transcriptome id Sobic.002G385900.1
Synonym Sb02g040210, AAR3
Functional annotation DCN1, putative, expressed
UniProt A0A1B6QFS9
Pfam PF03556
Panther DB PTHR12281 PTHR12281:SF10
NCBI CDD -
KEGG Orthology K17822; DCN1-like protein 1/2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G28970 : Domain of unknown function (DUF298)
RAP-DB (Rice) LOC_Os07g43720.1 : DCN1, putative, expressed
MaizeGDB (Corn) Zm00025a048852
Brachypodium KQK15076 , KQK15075
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G385900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G135600 UBA/TS-N domain containing protein, expressed -
2 Sobic.001G057800 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
3 Sobic.001G461900 vesicle transport protein GOT1B, putative, expressed -
4 Sobic.003G099100 ZOS9-05 - C2H2 zinc finger protein, expressed -
5 Sobic.002G166900 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
6 Sobic.010G042100 transcription elongation factor 1, putative, expressed -
7 Sobic.001G323000 UBX domain-containing protein, putative, expressed K18726: FAF2, FAS-associated factor 2
8 Sobic.009G207000 protein of unknown function DUF502 domain containing protein, expressed -
9 Sobic.006G281800 ras-related protein, putative, expressed K07910: Ras-related protein Rab-18
10 Sobic.001G313500 tobamovirus multiplication protein, putative, expressed -
11 Sobic.003G349300 serine/threonine-protein kinase AFC1, putative, expressed K08287: dual-specificity kinase
12 Sobic.003G201900 coiled-coil domain-containing protein, putative, expressed -
13 Sobic.009G146100 RNA recognition motif containing protein, putative, expressed K12831: SF3B4, splicing factor 3B subunit 4
14 Sobic.001G433400 Zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.001G158500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@LSD1 zinc finger domain containing protein, expressed -
16 Sobic.007G139700 DCN1, putative, expressed K17824: DCN1-like protein 4/5
17 Sobic.010G000900 spotted leaf 11, putative, expressed -
18 Sobic.010G229400 polyprenyl synthetase, putative, expressed K14066: geranyl diphosphate synthase
19 Sobic.002G045300 ubiquitin-conjugating enzyme, putative, expressed K10573: UBE2A, UBC2, ubiquitin-conjugating enzyme E2 A
20 Sobic.001G512300 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2


Gene co-expression network
sample Sobic002G385900 Sobic002G385900 Sobic009G135600 Sobic009G135600 Sobic002G385900--Sobic009G135600 Sobic001G057800 Sobic001G057800 Sobic002G385900--Sobic001G057800 Sobic001G461900 Sobic001G461900 Sobic002G385900--Sobic001G461900 Sobic003G099100 Sobic003G099100 Sobic002G385900--Sobic003G099100 Sobic002G166900 Sobic002G166900 Sobic002G385900--Sobic002G166900 Sobic010G042100 Sobic010G042100 Sobic002G385900--Sobic010G042100 Sobic001G323000 Sobic001G323000 Sobic002G385900--Sobic001G323000 Sobic009G207000 Sobic009G207000 Sobic002G385900--Sobic009G207000 Sobic006G281800 Sobic006G281800 Sobic002G385900--Sobic006G281800 Sobic009G135600--Sobic001G461900 Sobic003G349300 Sobic003G349300 Sobic009G135600--Sobic003G349300 Sobic009G146100 Sobic009G146100 Sobic009G135600--Sobic009G146100 Sobic001G433400 Sobic001G433400 Sobic009G135600--Sobic001G433400 Sobic009G135600--Sobic002G385900 Sobic001G388200 Sobic001G388200 Sobic009G135600--Sobic001G388200 Sobic002G400000 Sobic002G400000 Sobic009G135600--Sobic002G400000 Sobic001G294900 Sobic001G294900 Sobic009G135600--Sobic001G294900 Sobic001G054200 Sobic001G054200 Sobic009G135600--Sobic001G054200 Sobic001G057800--Sobic001G323000 Sobic001G057800--Sobic002G400000 Sobic002G352700 Sobic002G352700 Sobic001G057800--Sobic002G352700 Sobic001G057800--Sobic002G385900 Sobic001G158500 Sobic001G158500 Sobic001G057800--Sobic001G158500 Sobic004G130900 Sobic004G130900 Sobic001G057800--Sobic004G130900 Sobic010G000900 Sobic010G000900 Sobic001G057800--Sobic010G000900 Sobic010G168600 Sobic010G168600 Sobic001G057800--Sobic010G168600 Sobic001G057800--Sobic009G207000 Sobic001G461900--Sobic009G135600 Sobic007G045600 Sobic007G045600 Sobic001G461900--Sobic007G045600 Sobic001G461900--Sobic009G146100 Sobic004G327300 Sobic004G327300 Sobic001G461900--Sobic004G327300 Sobic007G142500 Sobic007G142500 Sobic001G461900--Sobic007G142500 Sobic007G168600 Sobic007G168600 Sobic001G461900--Sobic007G168600 Sobic004G086600 Sobic004G086600 Sobic001G461900--Sobic004G086600 Sobic004G335000 Sobic004G335000 Sobic001G461900--Sobic004G335000 Sobic007G096700 Sobic007G096700 Sobic001G461900--Sobic007G096700 Sobic009G123600 Sobic009G123600 Sobic003G099100--Sobic009G123600 Sobic003G099100--Sobic002G385900 Sobic004G202500 Sobic004G202500 Sobic003G099100--Sobic004G202500 Sobic009G222500 Sobic009G222500 Sobic003G099100--Sobic009G222500 Sobic010G027600 Sobic010G027600 Sobic003G099100--Sobic010G027600 Sobic003G099100--Sobic009G135600 Sobic006G049700 Sobic006G049700 Sobic003G099100--Sobic006G049700 Sobic010G278200 Sobic010G278200 Sobic003G099100--Sobic010G278200 Sobic004G115350 Sobic004G115350 Sobic003G099100--Sobic004G115350 Sobic006G090000 Sobic006G090000 Sobic002G166900--Sobic006G090000 Sobic004G067100 Sobic004G067100 Sobic002G166900--Sobic004G067100 Sobic001G283200 Sobic001G283200 Sobic002G166900--Sobic001G283200 Sobic002G166900--Sobic002G385900 Sobic010G188100 Sobic010G188100 Sobic002G166900--Sobic010G188100 Sobic004G167400 Sobic004G167400 Sobic002G166900--Sobic004G167400 Sobic004G321900 Sobic004G321900 Sobic002G166900--Sobic004G321900 Sobic004G212200 Sobic004G212200 Sobic002G166900--Sobic004G212200 Sobic001G220400 Sobic001G220400 Sobic002G166900--Sobic001G220400 Sobic002G045300 Sobic002G045300 Sobic010G042100--Sobic002G045300 Sobic010G042100--Sobic001G433400 Sobic003G117900 Sobic003G117900 Sobic010G042100--Sobic003G117900 Sobic010G042100--Sobic009G135600 Sobic010G042100--Sobic002G385900 Sobic003G367451 Sobic003G367451 Sobic010G042100--Sobic003G367451 Sobic003G253000 Sobic003G253000 Sobic010G042100--Sobic003G253000 Sobic004G020000 Sobic004G020000 Sobic010G042100--Sobic004G020000 Sobic010G042100--Sobic001G461900 Sobic001G206900 Sobic001G206900 Sobic001G323000--Sobic001G206900 Sobic006G034000 Sobic006G034000 Sobic001G323000--Sobic006G034000 Sobic009G228700 Sobic009G228700 Sobic001G323000--Sobic009G228700 Sobic001G323000--Sobic001G057800 Sobic003G312200 Sobic003G312200 Sobic001G323000--Sobic003G312200 Sobic006G148200 Sobic006G148200 Sobic001G323000--Sobic006G148200 Sobic001G323000--Sobic009G207000 Sobic001G323000--Sobic010G000900 Sobic001G085100 Sobic001G085100 Sobic001G323000--Sobic001G085100 Sobic009G207000--Sobic009G228700 Sobic004G066200 Sobic004G066200 Sobic009G207000--Sobic004G066200 Sobic001G199100 Sobic001G199100 Sobic009G207000--Sobic001G199100 Sobic009G207000--Sobic001G323000 Sobic009G207000--Sobic001G085100 Sobic006G249700 Sobic006G249700 Sobic009G207000--Sobic006G249700 Sobic009G207000--Sobic006G148200 Sobic009G207000--Sobic010G000900 Sobic003G012200 Sobic003G012200 Sobic009G207000--Sobic003G012200 Sobic009G225000 Sobic009G225000 Sobic006G281800--Sobic009G225000 Sobic006G281800--Sobic003G349300 Sobic006G281800--Sobic001G283200 Sobic004G181900 Sobic004G181900 Sobic006G281800--Sobic004G181900 Sobic006G281800--Sobic001G206900 Sobic006G281800--Sobic002G385900 Sobic004G206700 Sobic004G206700 Sobic006G281800--Sobic004G206700 Sobic010G064600 Sobic010G064600 Sobic006G281800--Sobic010G064600 Sobic006G281800--Sobic003G312200
Octagon: transcription factors


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