Gene annotation
Transcriptome id Sobic.003G099100.1
Synonym Sb03g008300
Functional annotation ZOS9-05 - C2H2 zinc finger protein, expressed
UniProt C5XEV8
Pfam PF02892 PF14372 PF05699
Panther DB PTHR23272 PTHR23272:SF21
NCBI CDD KOG1121; Tam3-transposase (Ac family)
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT1G18560 : BED zinc finger ;hAT family dimerisation domain
RAP-DB (Rice) LOC_Os01g02100.2 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium PNT69817 , KQK02359 , KQK02358 , PNT69818 , KQK02360 , KQK02361
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G099100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G123600 tungus CG8253-PA, putative, expressed -
2 Sobic.002G385900 DCN1, putative, expressed K17822: DCN1-like protein 1/2
3 Sobic.004G202500 serine/threonine-protein kinase AFC2, putative, expressed K08287: dual-specificity kinase
4 Sobic.009G222500 expressed protein -
5 Sobic.010G027600 transcription factor TFIIF, putative, expressed K11341: YEATS4, GAS41, YEATS domain-containing protein 4
6 Sobic.009G135600 UBA/TS-N domain containing protein, expressed -
7 Sobic.006G049700 SAM domain family protein, expressed -
8 Sobic.010G278200 expressed protein -
9 Sobic.004G115350 - K12843: PRPF3, U4/U6 small nuclear ribonucleoprotein PRP3
10 Sobic.004G066200 ubiquitin fusion degradation protein, putative, expressed K14016: ubiquitin fusion degradation protein 1
11 Sobic.008G153500 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
12 Sobic.010G229400 polyprenyl synthetase, putative, expressed K14066: geranyl diphosphate synthase
13 Sobic.007G166100 no apical meristem protein, putative, expressed -
14 Sobic.001G007200 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
15 Sobic.006G092400 calmodulin binding protein, putative, expressed -
16 Sobic.010G235200 oral cancer overexpressed protein 1, putative, expressed -
17 Sobic.003G349300 serine/threonine-protein kinase AFC1, putative, expressed K08287: dual-specificity kinase
18 Sobic.006G101700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
19 Sobic.003G201900 coiled-coil domain-containing protein, putative, expressed -
20 Sobic.009G207000 protein of unknown function DUF502 domain containing protein, expressed -


Gene co-expression network
sample Sobic003G099100 Sobic003G099100 Sobic009G123600 Sobic009G123600 Sobic003G099100--Sobic009G123600 Sobic002G385900 Sobic002G385900 Sobic003G099100--Sobic002G385900 Sobic004G202500 Sobic004G202500 Sobic003G099100--Sobic004G202500 Sobic009G222500 Sobic009G222500 Sobic003G099100--Sobic009G222500 Sobic010G027600 Sobic010G027600 Sobic003G099100--Sobic010G027600 Sobic009G135600 Sobic009G135600 Sobic003G099100--Sobic009G135600 Sobic006G049700 Sobic006G049700 Sobic003G099100--Sobic006G049700 Sobic010G278200 Sobic010G278200 Sobic003G099100--Sobic010G278200 Sobic004G115350 Sobic004G115350 Sobic003G099100--Sobic004G115350 Sobic002G059300 Sobic002G059300 Sobic009G123600--Sobic002G059300 Sobic009G123600--Sobic009G222500 Sobic001G085100 Sobic001G085100 Sobic009G123600--Sobic001G085100 Sobic009G123600--Sobic003G099100 Sobic001G199100 Sobic001G199100 Sobic009G123600--Sobic001G199100 Sobic001G512300 Sobic001G512300 Sobic009G123600--Sobic001G512300 Sobic004G206700 Sobic004G206700 Sobic009G123600--Sobic004G206700 Sobic003G012200 Sobic003G012200 Sobic009G123600--Sobic003G012200 Sobic007G166100 Sobic007G166100 Sobic009G123600--Sobic007G166100 Sobic002G385900--Sobic009G135600 Sobic001G057800 Sobic001G057800 Sobic002G385900--Sobic001G057800 Sobic001G461900 Sobic001G461900 Sobic002G385900--Sobic001G461900 Sobic002G385900--Sobic003G099100 Sobic002G166900 Sobic002G166900 Sobic002G385900--Sobic002G166900 Sobic010G042100 Sobic010G042100 Sobic002G385900--Sobic010G042100 Sobic001G323000 Sobic001G323000 Sobic002G385900--Sobic001G323000 Sobic009G207000 Sobic009G207000 Sobic002G385900--Sobic009G207000 Sobic006G281800 Sobic006G281800 Sobic002G385900--Sobic006G281800 Sobic004G066200 Sobic004G066200 Sobic004G202500--Sobic004G066200 Sobic004G202500--Sobic010G278200 Sobic004G202500--Sobic003G099100 Sobic008G124900 Sobic008G124900 Sobic004G202500--Sobic008G124900 Sobic001G193300 Sobic001G193300 Sobic004G202500--Sobic001G193300 Sobic006G101700 Sobic006G101700 Sobic004G202500--Sobic006G101700 Sobic001G007000 Sobic001G007000 Sobic004G202500--Sobic001G007000 Sobic007G093800 Sobic007G093800 Sobic004G202500--Sobic007G093800 Sobic010G130000 Sobic010G130000 Sobic004G202500--Sobic010G130000 Sobic009G075800 Sobic009G075800 Sobic009G222500--Sobic009G075800 Sobic009G222500--Sobic006G049700 Sobic001G080700 Sobic001G080700 Sobic009G222500--Sobic001G080700 Sobic009G222500--Sobic006G101700 Sobic009G222500--Sobic004G066200 Sobic007G166400 Sobic007G166400 Sobic009G222500--Sobic007G166400 Sobic009G222500--Sobic010G027600 Sobic003G264200 Sobic003G264200 Sobic009G222500--Sobic003G264200 Sobic004G235000 Sobic004G235000 Sobic009G222500--Sobic004G235000 Sobic010G018700 Sobic010G018700 Sobic010G027600--Sobic010G018700 Sobic010G027600--Sobic004G066200 Sobic010G027600--Sobic009G222500 Sobic002G352600 Sobic002G352600 Sobic010G027600--Sobic002G352600 Sobic009G179700 Sobic009G179700 Sobic010G027600--Sobic009G179700 Sobic002G110700 Sobic002G110700 Sobic010G027600--Sobic002G110700 Sobic002G192200 Sobic002G192200 Sobic010G027600--Sobic002G192200 Sobic009G228700 Sobic009G228700 Sobic010G027600--Sobic009G228700 Sobic010G027600--Sobic006G049700 Sobic009G135600--Sobic001G461900 Sobic003G349300 Sobic003G349300 Sobic009G135600--Sobic003G349300 Sobic009G146100 Sobic009G146100 Sobic009G135600--Sobic009G146100 Sobic001G433400 Sobic001G433400 Sobic009G135600--Sobic001G433400 Sobic009G135600--Sobic002G385900 Sobic001G388200 Sobic001G388200 Sobic009G135600--Sobic001G388200 Sobic002G400000 Sobic002G400000 Sobic009G135600--Sobic002G400000 Sobic001G294900 Sobic001G294900 Sobic009G135600--Sobic001G294900 Sobic001G054200 Sobic001G054200 Sobic009G135600--Sobic001G054200 Sobic006G049700--Sobic009G222500 Sobic006G049700--Sobic007G166400 Sobic006G049700--Sobic003G264200 Sobic006G049700--Sobic006G101700 Sobic007G167900 Sobic007G167900 Sobic006G049700--Sobic007G167900 Sobic004G226800 Sobic004G226800 Sobic006G049700--Sobic004G226800 Sobic006G049700--Sobic010G027600 Sobic002G113900 Sobic002G113900 Sobic006G049700--Sobic002G113900 Sobic004G356900 Sobic004G356900 Sobic006G049700--Sobic004G356900 Sobic010G147100 Sobic010G147100 Sobic010G278200--Sobic010G147100 Sobic009G138100 Sobic009G138100 Sobic010G278200--Sobic009G138100 Sobic010G278200--Sobic010G130000 Sobic001G124200 Sobic001G124200 Sobic010G278200--Sobic001G124200 Sobic006G033200 Sobic006G033200 Sobic010G278200--Sobic006G033200 Sobic005G126600 Sobic005G126600 Sobic010G278200--Sobic005G126600 Sobic003G118200 Sobic003G118200 Sobic010G278200--Sobic003G118200 Sobic003G316500 Sobic003G316500 Sobic010G278200--Sobic003G316500 Sobic010G278200--Sobic008G124900 Sobic004G115350--Sobic004G356900 Sobic004G115350--Sobic006G049700 Sobic004G115350--Sobic009G222500 Sobic004G115350--Sobic004G202500 Sobic004G115350--Sobic006G101700 Sobic004G115350--Sobic003G099100 Sobic004G115350--Sobic003G349300 Sobic008G153500 Sobic008G153500 Sobic004G115350--Sobic008G153500 Sobic010G209000 Sobic010G209000 Sobic004G115350--Sobic010G209000
Octagon: transcription factors


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