Gene annotation
Transcriptome id Sobic.010G235200.2
Synonym Sb10g027700
Functional annotation oral cancer overexpressed protein 1, putative, expressed
UniProt C5Z891
Pfam PF09811
Panther DB PTHR28532
NCBI CDD KOG4595; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G20830 : transferases;folic acid binding
RAP-DB (Rice) LOC_Os07g34610.1 : oral cancer overexpressed protein 1, putative, expressed
MaizeGDB (Corn) Zm00025a054975 , Zm00025a054976 , Zm00025a018167 , Zm00025a033210 , Zm00025a053103 , Zm00025a010067
Brachypodium KQK15924
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G235200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G307600 ATP-binding domain-containing protein, putative, expressed K14168: CTU1, cytoplasmic tRNA 2-thiolation protein 1
2 Sobic.004G228800 LMBR1 integral membrane protein, putative, expressed -
3 Sobic.007G093800 expressed protein -
4 Sobic.010G264000 expressed protein(PubMedID : 28640841)@expressed protein -
5 Sobic.008G124900 heat shock protein DnaJ, putative, expressed -
6 Sobic.004G323700 zinc finger family protein, putative, expressed -
7 Sobic.009G131900 - K18177: cytochrome c oxidase assembly factor 4
8 Sobic.002G303600 -(PubMedID : 29147737)@RIN3, putative, expressed K10636: AMFR, autocrine motility factor receptor
9 Sobic.003G312200 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
10 Sobic.004G178200 ligatin, putative, expressed K15027: translation initiation factor 2D
11 Sobic.004G003401 - -
12 Sobic.001G471000 RNase L inhibitor protein-related, putative, expressed K09140: pre-rRNA-processing protein TSR3
13 Sobic.003G119700 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.004G353000 ABC transporter, ATP-binding protein, putative, expressed K06158: ATP-binding cassette, subfamily F, member 3
15 Sobic.009G192000 transcription initiation factor IIF beta subunit, putative, expressed K03139: TFIIF2, GTF2F2, transcription initiation factor TFIIF subunit beta
16 Sobic.006G180000 syntaxin-18, putative, expressed K08492: syntaxin 18
17 Sobic.007G042900 BSD domain-containing protein, putative, expressed K03141: TFIIH1, GTF2H1, transcription initiation factor TFIIH subunit 1
18 Sobic.003G038600 phosducin-like protein 3, putative, expressed -
19 Sobic.010G278200 expressed protein -
20 Sobic.004G202500 serine/threonine-protein kinase AFC2, putative, expressed K08287: dual-specificity kinase


Gene co-expression network
sample Sobic010G235200 Sobic010G235200 Sobic004G307600 Sobic004G307600 Sobic010G235200--Sobic004G307600 Sobic004G228800 Sobic004G228800 Sobic010G235200--Sobic004G228800 Sobic007G093800 Sobic007G093800 Sobic010G235200--Sobic007G093800 Sobic010G264000 Sobic010G264000 Sobic010G235200--Sobic010G264000 Sobic008G124900 Sobic008G124900 Sobic010G235200--Sobic008G124900 Sobic004G323700 Sobic004G323700 Sobic010G235200--Sobic004G323700 Sobic009G131900 Sobic009G131900 Sobic010G235200--Sobic009G131900 Sobic002G303600 Sobic002G303600 Sobic010G235200--Sobic002G303600 Sobic003G312200 Sobic003G312200 Sobic010G235200--Sobic003G312200 Sobic004G307600--Sobic010G235200 Sobic004G202500 Sobic004G202500 Sobic004G307600--Sobic004G202500 Sobic004G307600--Sobic002G303600 Sobic009G192000 Sobic009G192000 Sobic004G307600--Sobic009G192000 Sobic004G307600--Sobic008G124900 Sobic006G180000 Sobic006G180000 Sobic004G307600--Sobic006G180000 Sobic002G117400 Sobic002G117400 Sobic004G307600--Sobic002G117400 Sobic004G307600--Sobic007G093800 Sobic010G223300 Sobic010G223300 Sobic004G307600--Sobic010G223300 Sobic004G261600 Sobic004G261600 Sobic004G228800--Sobic004G261600 Sobic010G261600 Sobic010G261600 Sobic004G228800--Sobic010G261600 Sobic004G228800--Sobic004G323700 Sobic010G278200 Sobic010G278200 Sobic004G228800--Sobic010G278200 Sobic004G236200 Sobic004G236200 Sobic004G228800--Sobic004G236200 Sobic006G131000 Sobic006G131000 Sobic004G228800--Sobic006G131000 Sobic005G177700 Sobic005G177700 Sobic004G228800--Sobic005G177700 Sobic007G056600 Sobic007G056600 Sobic004G228800--Sobic007G056600 Sobic003G126300 Sobic003G126300 Sobic004G228800--Sobic003G126300 Sobic007G093800--Sobic008G124900 Sobic007G093800--Sobic006G131000 Sobic004G178200 Sobic004G178200 Sobic007G093800--Sobic004G178200 Sobic009G068500 Sobic009G068500 Sobic007G093800--Sobic009G068500 Sobic008G046500 Sobic008G046500 Sobic007G093800--Sobic008G046500 Sobic007G093800--Sobic010G278200 Sobic003G264100 Sobic003G264100 Sobic007G093800--Sobic003G264100 Sobic004G092500 Sobic004G092500 Sobic007G093800--Sobic004G092500 Sobic007G218000 Sobic007G218000 Sobic007G093800--Sobic007G218000 Sobic006G270600 Sobic006G270600 Sobic010G264000--Sobic006G270600 Sobic008G129600 Sobic008G129600 Sobic010G264000--Sobic008G129600 Sobic008G103300 Sobic008G103300 Sobic010G264000--Sobic008G103300 Sobic001G042200 Sobic001G042200 Sobic010G264000--Sobic001G042200 Sobic010G264000--Sobic010G235200 Sobic003G363700 Sobic003G363700 Sobic010G264000--Sobic003G363700 Sobic003G182300 Sobic003G182300 Sobic010G264000--Sobic003G182300 Sobic001G492200 Sobic001G492200 Sobic010G264000--Sobic001G492200 Sobic006G142400 Sobic006G142400 Sobic010G264000--Sobic006G142400 Sobic008G124900--Sobic007G093800 Sobic003G119700 Sobic003G119700 Sobic008G124900--Sobic003G119700 Sobic006G033200 Sobic006G033200 Sobic008G124900--Sobic006G033200 Sobic001G096000 Sobic001G096000 Sobic008G124900--Sobic001G096000 Sobic008G124900--Sobic010G278200 Sobic008G124900--Sobic006G131000 Sobic003G104000 Sobic003G104000 Sobic008G124900--Sobic003G104000 Sobic010G249100 Sobic010G249100 Sobic008G124900--Sobic010G249100 Sobic008G124900--Sobic009G068500 Sobic004G323700--Sobic002G117400 Sobic004G323700--Sobic007G218000 Sobic004G323700--Sobic002G303600 Sobic004G323700--Sobic010G261600 Sobic004G323700--Sobic004G228800 Sobic004G323700--Sobic010G278200 Sobic006G174850 Sobic006G174850 Sobic004G323700--Sobic006G174850 Sobic004G323700--Sobic006G131000 Sobic004G039600 Sobic004G039600 Sobic004G323700--Sobic004G039600 Sobic009G131900--Sobic003G104000 Sobic009G131900--Sobic006G270600 Sobic004G316700 Sobic004G316700 Sobic009G131900--Sobic004G316700 Sobic007G042900 Sobic007G042900 Sobic009G131900--Sobic007G042900 Sobic009G131900--Sobic003G182300 Sobic009G131900--Sobic010G235200 Sobic009G131900--Sobic006G131000 Sobic009G131900--Sobic008G129600 Sobic009G131900--Sobic010G264000 Sobic002G303600--Sobic010G261600 Sobic002G303600--Sobic004G323700 Sobic002G303600--Sobic004G178200 Sobic002G303600--Sobic006G180000 Sobic002G303600--Sobic007G218000 Sobic004G028100 Sobic004G028100 Sobic002G303600--Sobic004G028100 Sobic003G422900 Sobic003G422900 Sobic002G303600--Sobic003G422900 Sobic009G092400 Sobic009G092400 Sobic002G303600--Sobic009G092400 Sobic004G003401 Sobic004G003401 Sobic002G303600--Sobic004G003401 Sobic006G034000 Sobic006G034000 Sobic003G312200--Sobic006G034000 Sobic001G091300 Sobic001G091300 Sobic003G312200--Sobic001G091300 Sobic001G323000 Sobic001G323000 Sobic003G312200--Sobic001G323000 Sobic001G206900 Sobic001G206900 Sobic003G312200--Sobic001G206900 Sobic009G228700 Sobic009G228700 Sobic003G312200--Sobic009G228700 Sobic001G261436 Sobic001G261436 Sobic003G312200--Sobic001G261436 Sobic001G085100 Sobic001G085100 Sobic003G312200--Sobic001G085100 Sobic010G130000 Sobic010G130000 Sobic003G312200--Sobic010G130000 Sobic005G074500 Sobic005G074500 Sobic003G312200--Sobic005G074500
Octagon: transcription factors


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