Gene annotation
Transcriptome id Sobic.001G471000.1
Synonym Sb01g044120
Functional annotation RNase L inhibitor protein-related, putative, expressed
UniProt C5WUP8
Pfam PF04068 PF04034
Panther DB PTHR20426 PTHR20426:SF0
NCBI CDD KOG3154; Uncharacterized conserved protein
KEGG Orthology K09140; pre-rRNA-processing protein TSR3
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G10070 : RNase L inhibitor protein-related
RAP-DB (Rice) LOC_Os03g09920.1 : RNase L inhibitor protein-related, putative, expressed
MaizeGDB (Corn) Zm00025a053182
Brachypodium -
Barley -
Wheat TraesCS4A02G043700 , TraesCS4D02G264400 , TraesCS4B02G264400
Populus -


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cDNA sequences
Sobic.001G471000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G112600 co-chaperone GrpE protein, putative, expressed K03687: molecular chaperone GrpE
2 Sobic.010G235200 oral cancer overexpressed protein 1, putative, expressed -
3 Sobic.006G142400 suppressor of stem-loop protein 1, putative, expressed K03142: TFIIH2, GTF2H2, transcription initiation factor TFIIH subunit 2
4 Sobic.007G042900 BSD domain-containing protein, putative, expressed K03141: TFIIH1, GTF2H1, transcription initiation factor TFIIH subunit 1
5 Sobic.004G068500 CUE domain containing protein, expressed -
6 Sobic.005G155100 OsWAK98 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
7 Sobic.007G077400 dehydrogenase, putative, expressed K07512: MECR, mitochondrial enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase
8 Sobic.001G477700 WD domain, G-beta repeat domain containing protein, expressed K11807: WDTC1, WD and tetratricopeptide repeats protein 1
9 Sobic.007G162800 expressed protein -
10 Sobic.008G016100 WD domain, G-beta repeat domain containing protein, expressed K14848: RRB1, ribosome assembly protein RRB1
11 Sobic.007G184500 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
12 Sobic.001G096000 CWF19-like 2, cell cycle control, putative, expressed -
13 Sobic.010G264000 expressed protein(PubMedID : 28640841)@expressed protein -
14 Sobic.001G118700 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed -
15 Sobic.001G193500 DnaK family protein, putative, expressed K04043: dnaK, molecular chaperone DnaK
16 Sobic.004G025300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1
17 Sobic.006G135900 cell division control protein 48 homolog B, putative, expressed -
18 Sobic.003G214300 expressed protein -
19 Sobic.001G067400 arv1, putative, expressed -
20 Sobic.001G413800 expressed protein K13141: integrator complex subunit 4


Gene co-expression network
sample Sobic001G471000 Sobic001G471000 Sobic007G112600 Sobic007G112600 Sobic001G471000--Sobic007G112600 Sobic010G235200 Sobic010G235200 Sobic001G471000--Sobic010G235200 Sobic006G142400 Sobic006G142400 Sobic001G471000--Sobic006G142400 Sobic007G042900 Sobic007G042900 Sobic001G471000--Sobic007G042900 Sobic004G068500 Sobic004G068500 Sobic001G471000--Sobic004G068500 Sobic005G155100 Sobic005G155100 Sobic001G471000--Sobic005G155100 Sobic007G077400 Sobic007G077400 Sobic001G471000--Sobic007G077400 Sobic001G477700 Sobic001G477700 Sobic001G471000--Sobic001G477700 Sobic007G162800 Sobic007G162800 Sobic001G471000--Sobic007G162800 Sobic001G015400 Sobic001G015400 Sobic007G112600--Sobic001G015400 Sobic003G146600 Sobic003G146600 Sobic007G112600--Sobic003G146600 Sobic002G150700 Sobic002G150700 Sobic007G112600--Sobic002G150700 Sobic004G208500 Sobic004G208500 Sobic007G112600--Sobic004G208500 Sobic001G145400 Sobic001G145400 Sobic007G112600--Sobic001G145400 Sobic010G223300 Sobic010G223300 Sobic007G112600--Sobic010G223300 Sobic007G112600--Sobic001G471000 Sobic008G103300 Sobic008G103300 Sobic007G112600--Sobic008G103300 Sobic006G083100 Sobic006G083100 Sobic007G112600--Sobic006G083100 Sobic004G307600 Sobic004G307600 Sobic010G235200--Sobic004G307600 Sobic004G228800 Sobic004G228800 Sobic010G235200--Sobic004G228800 Sobic007G093800 Sobic007G093800 Sobic010G235200--Sobic007G093800 Sobic010G264000 Sobic010G264000 Sobic010G235200--Sobic010G264000 Sobic008G124900 Sobic008G124900 Sobic010G235200--Sobic008G124900 Sobic004G323700 Sobic004G323700 Sobic010G235200--Sobic004G323700 Sobic009G131900 Sobic009G131900 Sobic010G235200--Sobic009G131900 Sobic002G303600 Sobic002G303600 Sobic010G235200--Sobic002G303600 Sobic003G312200 Sobic003G312200 Sobic010G235200--Sobic003G312200 Sobic003G214300 Sobic003G214300 Sobic006G142400--Sobic003G214300 Sobic001G099900 Sobic001G099900 Sobic006G142400--Sobic001G099900 Sobic001G042200 Sobic001G042200 Sobic006G142400--Sobic001G042200 Sobic006G142400--Sobic010G264000 Sobic006G142400--Sobic007G042900 Sobic009G040800 Sobic009G040800 Sobic006G142400--Sobic009G040800 Sobic006G142400--Sobic002G150700 Sobic001G012900 Sobic001G012900 Sobic006G142400--Sobic001G012900 Sobic004G084500 Sobic004G084500 Sobic006G142400--Sobic004G084500 Sobic004G345400 Sobic004G345400 Sobic007G042900--Sobic004G345400 Sobic009G249700 Sobic009G249700 Sobic007G042900--Sobic009G249700 Sobic007G042900--Sobic001G042200 Sobic005G110499 Sobic005G110499 Sobic007G042900--Sobic005G110499 Sobic010G169900 Sobic010G169900 Sobic007G042900--Sobic010G169900 Sobic003G182300 Sobic003G182300 Sobic007G042900--Sobic003G182300 Sobic003G394200 Sobic003G394200 Sobic007G042900--Sobic003G394200 Sobic006G139100 Sobic006G139100 Sobic007G042900--Sobic006G139100 Sobic001G005600 Sobic001G005600 Sobic007G042900--Sobic001G005600 Sobic007G111100 Sobic007G111100 Sobic004G068500--Sobic007G111100 Sobic002G262700 Sobic002G262700 Sobic004G068500--Sobic002G262700 Sobic004G068500--Sobic001G005600 Sobic002G177000 Sobic002G177000 Sobic004G068500--Sobic002G177000 Sobic007G046200 Sobic007G046200 Sobic004G068500--Sobic007G046200 Sobic004G068500--Sobic001G042200 Sobic004G068500--Sobic007G042900 Sobic003G051200 Sobic003G051200 Sobic004G068500--Sobic003G051200 Sobic001G517500 Sobic001G517500 Sobic004G068500--Sobic001G517500 Sobic005G155100--Sobic001G471000 Sobic004G207900 Sobic004G207900 Sobic005G155100--Sobic004G207900 Sobic004G358900 Sobic004G358900 Sobic005G155100--Sobic004G358900 Sobic003G050900 Sobic003G050900 Sobic005G155100--Sobic003G050900 Sobic001G467100 Sobic001G467100 Sobic005G155100--Sobic001G467100 Sobic008G145100 Sobic008G145100 Sobic005G155100--Sobic008G145100 Sobic004G025300 Sobic004G025300 Sobic005G155100--Sobic004G025300 Sobic002G357900 Sobic002G357900 Sobic005G155100--Sobic002G357900 Sobic005G155100--Sobic004G208500 Sobic007G184500 Sobic007G184500 Sobic007G077400--Sobic007G184500 Sobic006G182200 Sobic006G182200 Sobic007G077400--Sobic006G182200 Sobic001G033500 Sobic001G033500 Sobic007G077400--Sobic001G033500 Sobic007G077400--Sobic003G051200 Sobic004G353000 Sobic004G353000 Sobic007G077400--Sobic004G353000 Sobic002G418700 Sobic002G418700 Sobic007G077400--Sobic002G418700 Sobic001G323000 Sobic001G323000 Sobic007G077400--Sobic001G323000 Sobic010G130000 Sobic010G130000 Sobic007G077400--Sobic010G130000 Sobic001G466700 Sobic001G466700 Sobic007G077400--Sobic001G466700 Sobic006G131000 Sobic006G131000 Sobic001G477700--Sobic006G131000 Sobic001G096000 Sobic001G096000 Sobic001G477700--Sobic001G096000 Sobic001G477700--Sobic007G042900 Sobic001G034500 Sobic001G034500 Sobic001G477700--Sobic001G034500 Sobic007G196900 Sobic007G196900 Sobic001G477700--Sobic007G196900 Sobic007G180600 Sobic007G180600 Sobic001G477700--Sobic007G180600 Sobic001G413800 Sobic001G413800 Sobic001G477700--Sobic001G413800 Sobic003G284000 Sobic003G284000 Sobic001G477700--Sobic003G284000 Sobic010G204400 Sobic010G204400 Sobic001G477700--Sobic010G204400 Sobic007G162800--Sobic001G096000 Sobic009G226400 Sobic009G226400 Sobic007G162800--Sobic009G226400 Sobic007G162800--Sobic007G184500 Sobic003G006400 Sobic003G006400 Sobic007G162800--Sobic003G006400 Sobic007G162800--Sobic003G214300 Sobic007G162800--Sobic002G418700 Sobic001G143500 Sobic001G143500 Sobic007G162800--Sobic001G143500 Sobic007G162800--Sobic009G131900 Sobic008G004400 Sobic008G004400 Sobic007G162800--Sobic008G004400
Octagon: transcription factors


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