Gene annotation
Transcriptome id Sobic.003G214300.2,Sobic.003G214300.5
Synonym Sb03g027350
Functional annotation expressed protein
UniProt C5XQC8
Pfam -
Panther DB PTHR36076
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G57230 : Thioredoxin superfamily protein
RAP-DB (Rice) LOC_Os06g28740.1 : expressed protein
MaizeGDB (Corn) Zm00025a028659
Brachypodium KQK18886 , KQK18887
Barley -
Wheat TraesCS7A02G234700 , TraesCS7A02G234700 , TraesCS1A02G379900 , TraesCS1B02G401900 , TraesCS7D02G234700 , TraesCS7D02G234700 , TraesCS7B02G132900 , TraesCS1D02G387300
Populus -


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cDNA sequences
Sobic.003G214300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G142400 suppressor of stem-loop protein 1, putative, expressed K03142: TFIIH2, GTF2H2, transcription initiation factor TFIIH subunit 2
2 Sobic.008G098600 DNA-directed RNA polymerase III subunit RPC9, putative, expressed -
3 Sobic.001G499000 BTBP1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with pentapeptide repeats, expressed -
4 Sobic.004G072800 expressed protein -
5 Sobic.010G264000 expressed protein(PubMedID : 28640841)@expressed protein -
6 Sobic.009G131900 - K18177: cytochrome c oxidase assembly factor 4
7 Sobic.010G247400 Brix domain containing protein, putative, expressed K14561: U3 small nucleolar ribonucleoprotein protein IMP4
8 Sobic.001G061200 25.3 kDa vesicle transport protein, putative, expressed K08517: vesicle transport protein SEC22
9 Sobic.007G162800 expressed protein -
10 Sobic.009G036200 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, putative, expressed K11648: SMARCB1, SNF5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
11 Sobic.010G235200 oral cancer overexpressed protein 1, putative, expressed -
12 Sobic.001G404200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17790: mitochondrial import inner membrane translocase subunit TIM22
13 Sobic.001G396800 peptide chain release factor protein, putative, expressed K02836: peptide chain release factor 2
14 Sobic.001G289700 actin-related protein 2/3 complex subunit 2, putative, expressed K05758: actin related protein 2/3 complex, subunit 2
15 Sobic.001G067900 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
16 Sobic.001G249700 expressed protein K11877: PSMG3, proteasome assembly chaperone 3
17 Sobic.010G073100 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
18 Sobic.009G258400 adhesion regulating molecule family, putative, expressed -
19 Sobic.008G129600 glucosidase II beta subunit-like domain containing protein, expressed K10088: protein OS-9
20 Sobic.007G115900 SAM domain family protein, expressed -


Gene co-expression network
sample Sobic003G214300 Sobic003G214300 Sobic006G142400 Sobic006G142400 Sobic003G214300--Sobic006G142400 Sobic008G098600 Sobic008G098600 Sobic003G214300--Sobic008G098600 Sobic001G499000 Sobic001G499000 Sobic003G214300--Sobic001G499000 Sobic004G072800 Sobic004G072800 Sobic003G214300--Sobic004G072800 Sobic010G264000 Sobic010G264000 Sobic003G214300--Sobic010G264000 Sobic009G131900 Sobic009G131900 Sobic003G214300--Sobic009G131900 Sobic010G247400 Sobic010G247400 Sobic003G214300--Sobic010G247400 Sobic001G061200 Sobic001G061200 Sobic003G214300--Sobic001G061200 Sobic007G162800 Sobic007G162800 Sobic003G214300--Sobic007G162800 Sobic006G142400--Sobic003G214300 Sobic001G099900 Sobic001G099900 Sobic006G142400--Sobic001G099900 Sobic001G042200 Sobic001G042200 Sobic006G142400--Sobic001G042200 Sobic006G142400--Sobic010G264000 Sobic007G042900 Sobic007G042900 Sobic006G142400--Sobic007G042900 Sobic009G040800 Sobic009G040800 Sobic006G142400--Sobic009G040800 Sobic002G150700 Sobic002G150700 Sobic006G142400--Sobic002G150700 Sobic001G012900 Sobic001G012900 Sobic006G142400--Sobic001G012900 Sobic004G084500 Sobic004G084500 Sobic006G142400--Sobic004G084500 Sobic010G007100 Sobic010G007100 Sobic008G098600--Sobic010G007100 Sobic008G098600--Sobic003G214300 Sobic003G382500 Sobic003G382500 Sobic008G098600--Sobic003G382500 Sobic009G046700 Sobic009G046700 Sobic008G098600--Sobic009G046700 Sobic003G006400 Sobic003G006400 Sobic008G098600--Sobic003G006400 Sobic008G098600--Sobic006G142400 Sobic009G251200 Sobic009G251200 Sobic008G098600--Sobic009G251200 Sobic008G098600--Sobic010G264000 Sobic001G322600 Sobic001G322600 Sobic008G098600--Sobic001G322600 Sobic001G499000--Sobic003G214300 Sobic008G103300 Sobic008G103300 Sobic001G499000--Sobic008G103300 Sobic008G129600 Sobic008G129600 Sobic001G499000--Sobic008G129600 Sobic001G499000--Sobic001G061200 Sobic009G226400 Sobic009G226400 Sobic001G499000--Sobic009G226400 Sobic006G056200 Sobic006G056200 Sobic001G499000--Sobic006G056200 Sobic006G044600 Sobic006G044600 Sobic001G499000--Sobic006G044600 Sobic006G278700 Sobic006G278700 Sobic001G499000--Sobic006G278700 Sobic001G023100 Sobic001G023100 Sobic001G499000--Sobic001G023100 Sobic001G067900 Sobic001G067900 Sobic004G072800--Sobic001G067900 Sobic003G350600 Sobic003G350600 Sobic004G072800--Sobic003G350600 Sobic003G007500 Sobic003G007500 Sobic004G072800--Sobic003G007500 Sobic002G313500 Sobic002G313500 Sobic004G072800--Sobic002G313500 Sobic007G118000 Sobic007G118000 Sobic004G072800--Sobic007G118000 Sobic001G522900 Sobic001G522900 Sobic004G072800--Sobic001G522900 Sobic002G281300 Sobic002G281300 Sobic004G072800--Sobic002G281300 Sobic001G429400 Sobic001G429400 Sobic004G072800--Sobic001G429400 Sobic003G045400 Sobic003G045400 Sobic004G072800--Sobic003G045400 Sobic006G270600 Sobic006G270600 Sobic010G264000--Sobic006G270600 Sobic010G264000--Sobic008G129600 Sobic010G264000--Sobic008G103300 Sobic010G264000--Sobic001G042200 Sobic010G235200 Sobic010G235200 Sobic010G264000--Sobic010G235200 Sobic003G363700 Sobic003G363700 Sobic010G264000--Sobic003G363700 Sobic003G182300 Sobic003G182300 Sobic010G264000--Sobic003G182300 Sobic001G492200 Sobic001G492200 Sobic010G264000--Sobic001G492200 Sobic010G264000--Sobic006G142400 Sobic003G104000 Sobic003G104000 Sobic009G131900--Sobic003G104000 Sobic009G131900--Sobic006G270600 Sobic004G316700 Sobic004G316700 Sobic009G131900--Sobic004G316700 Sobic009G131900--Sobic007G042900 Sobic009G131900--Sobic003G182300 Sobic009G131900--Sobic010G235200 Sobic006G131000 Sobic006G131000 Sobic009G131900--Sobic006G131000 Sobic009G131900--Sobic008G129600 Sobic009G131900--Sobic010G264000 Sobic001G249700 Sobic001G249700 Sobic010G247400--Sobic001G249700 Sobic001G259000 Sobic001G259000 Sobic010G247400--Sobic001G259000 Sobic001G527300 Sobic001G527300 Sobic010G247400--Sobic001G527300 Sobic002G341800 Sobic002G341800 Sobic010G247400--Sobic002G341800 Sobic002G077900 Sobic002G077900 Sobic010G247400--Sobic002G077900 Sobic001G370300 Sobic001G370300 Sobic010G247400--Sobic001G370300 Sobic003G407600 Sobic003G407600 Sobic010G247400--Sobic003G407600 Sobic006G233300 Sobic006G233300 Sobic010G247400--Sobic006G233300 Sobic009G033900 Sobic009G033900 Sobic010G247400--Sobic009G033900 Sobic001G193100 Sobic001G193100 Sobic001G061200--Sobic001G193100 Sobic007G173700 Sobic007G173700 Sobic001G061200--Sobic007G173700 Sobic003G222700 Sobic003G222700 Sobic001G061200--Sobic003G222700 Sobic009G207200 Sobic009G207200 Sobic001G061200--Sobic009G207200 Sobic001G061200--Sobic008G129600 Sobic002G276800 Sobic002G276800 Sobic001G061200--Sobic002G276800 Sobic002G029300 Sobic002G029300 Sobic001G061200--Sobic002G029300 Sobic003G148900 Sobic003G148900 Sobic001G061200--Sobic003G148900 Sobic001G061200--Sobic001G023100 Sobic001G096000 Sobic001G096000 Sobic007G162800--Sobic001G096000 Sobic007G162800--Sobic009G226400 Sobic007G184500 Sobic007G184500 Sobic007G162800--Sobic007G184500 Sobic007G162800--Sobic003G006400 Sobic007G162800--Sobic003G214300 Sobic002G418700 Sobic002G418700 Sobic007G162800--Sobic002G418700 Sobic001G143500 Sobic001G143500 Sobic007G162800--Sobic001G143500 Sobic007G162800--Sobic009G131900 Sobic008G004400 Sobic008G004400 Sobic007G162800--Sobic008G004400
Octagon: transcription factors


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