Gene annotation
Transcriptome id Sobic.001G499000.2
Synonym Sb01g046610, FIP2
Functional annotation BTBP1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with pentapeptide repeats, expressed
UniProt A0A1B6QQF0
Pfam PF02214 PF00805
Panther DB PTHR14958 PTHR14958:SF30
NCBI CDD KOG1665; AFH1-interacting protein FIP2, contains BTB/POZ domain and pentapeptide repeats
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G55000 : potassium channel tetramerisation domain-containing protein / pentapeptide repeat-containing protein
RAP-DB (Rice) LOC_Os03g06160.1 : BTBP1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with pentapeptide repeats, expressed
MaizeGDB (Corn) Zm00025a053443
Brachypodium KQJ96844
Barley HORVU4Hr1G072590.1 , HORVU4Hr1G072590.3 , HORVU4Hr1G072590.2 , HORVU4Hr1G072590.5 , HORVU4Hr1G072590.4 , HORVU4Hr1G072590.7 , HORVU4Hr1G072590.6 , HORVU4Hr1G072590.9 , HORVU4Hr1G072590.8 , HORVU4Hr1G072590.15 , HORVU4Hr1G072590.14 , HORVU4Hr1G072590.16 , HORVU4Hr1G072590.11 , HORVU4Hr1G072590.13 , HORVU4Hr1G072590.12
Wheat TraesCS4A02G032800 , TraesCS4A02G032800 , TraesCS4A02G032800 , TraesCS4B02G272500 , TraesCS4D02G271600 , TraesCS4D02G271600
Populus -


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cDNA sequences
Sobic.001G499000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G214300 expressed protein -
2 Sobic.008G103300 vacuolar protein sorting-associated protein 26, putative, expressed K18466: vacuolar protein sorting-associated protein 26
3 Sobic.008G129600 glucosidase II beta subunit-like domain containing protein, expressed K10088: protein OS-9
4 Sobic.001G061200 25.3 kDa vesicle transport protein, putative, expressed K08517: vesicle transport protein SEC22
5 Sobic.009G226400 dynamin family protein, putative, expressed -
6 Sobic.006G056200 transport protein particle component, Bet3, domain containing protein, expressed -
7 Sobic.006G044600 eukaryotic translation initiation factor 3 subunit H, putative, expressed K03247: translation initiation factor 3 subunit H
8 Sobic.006G278700 expressed protein -
9 Sobic.001G023100 ACBP4, putative, expressed -
10 Sobic.007G162800 expressed protein -
11 Sobic.002G077900 eukaryotic translation initiation factor 3 subunit E, putative, expressed K03250: EIF3E, translation initiation factor 3 subunit E
12 Sobic.001G369000 adapitin protein, putative, expressed K12392: AP-1 complex subunit beta-1
13 Sobic.009G058500 phosphatidylinositolglycan-related, putative, expressed K03858: PIGH, phosphatidylinositol N-acetylglucosaminyltransferase subunit H
14 Sobic.002G029300 pleckstrin homology domain-containing protein, putative, expressed -
15 Sobic.008G145100 glycosyl transferase, group 1 domain containing protein, expressed K03844: alpha-1,2-mannosyltransferase
16 Sobic.007G184500 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
17 Sobic.009G238800 expressed protein -
18 Sobic.001G492200 OsFBK11 - F-box domain and kelch repeat containing protein, expressed -
19 Sobic.010G073100 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
20 Sobic.003G125100 uncharacterized Cys-rich domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G499000 Sobic001G499000 Sobic003G214300 Sobic003G214300 Sobic001G499000--Sobic003G214300 Sobic008G103300 Sobic008G103300 Sobic001G499000--Sobic008G103300 Sobic008G129600 Sobic008G129600 Sobic001G499000--Sobic008G129600 Sobic001G061200 Sobic001G061200 Sobic001G499000--Sobic001G061200 Sobic009G226400 Sobic009G226400 Sobic001G499000--Sobic009G226400 Sobic006G056200 Sobic006G056200 Sobic001G499000--Sobic006G056200 Sobic006G044600 Sobic006G044600 Sobic001G499000--Sobic006G044600 Sobic006G278700 Sobic006G278700 Sobic001G499000--Sobic006G278700 Sobic001G023100 Sobic001G023100 Sobic001G499000--Sobic001G023100 Sobic006G142400 Sobic006G142400 Sobic003G214300--Sobic006G142400 Sobic008G098600 Sobic008G098600 Sobic003G214300--Sobic008G098600 Sobic003G214300--Sobic001G499000 Sobic004G072800 Sobic004G072800 Sobic003G214300--Sobic004G072800 Sobic010G264000 Sobic010G264000 Sobic003G214300--Sobic010G264000 Sobic009G131900 Sobic009G131900 Sobic003G214300--Sobic009G131900 Sobic010G247400 Sobic010G247400 Sobic003G214300--Sobic010G247400 Sobic003G214300--Sobic001G061200 Sobic007G162800 Sobic007G162800 Sobic003G214300--Sobic007G162800 Sobic008G055900 Sobic008G055900 Sobic008G103300--Sobic008G055900 Sobic002G371700 Sobic002G371700 Sobic008G103300--Sobic002G371700 Sobic003G046300 Sobic003G046300 Sobic008G103300--Sobic003G046300 Sobic003G132000 Sobic003G132000 Sobic008G103300--Sobic003G132000 Sobic005G074500 Sobic005G074500 Sobic008G103300--Sobic005G074500 Sobic001G114500 Sobic001G114500 Sobic008G103300--Sobic001G114500 Sobic001G145400 Sobic001G145400 Sobic008G103300--Sobic001G145400 Sobic006G200700 Sobic006G200700 Sobic008G103300--Sobic006G200700 Sobic002G295500 Sobic002G295500 Sobic008G103300--Sobic002G295500 Sobic008G129600--Sobic008G055900 Sobic007G177300 Sobic007G177300 Sobic008G129600--Sobic007G177300 Sobic008G129600--Sobic006G056200 Sobic008G129600--Sobic008G103300 Sobic008G129600--Sobic010G264000 Sobic001G467100 Sobic001G467100 Sobic008G129600--Sobic001G467100 Sobic001G449900 Sobic001G449900 Sobic008G129600--Sobic001G449900 Sobic003G182300 Sobic003G182300 Sobic008G129600--Sobic003G182300 Sobic006G270600 Sobic006G270600 Sobic008G129600--Sobic006G270600 Sobic001G193100 Sobic001G193100 Sobic001G061200--Sobic001G193100 Sobic007G173700 Sobic007G173700 Sobic001G061200--Sobic007G173700 Sobic003G222700 Sobic003G222700 Sobic001G061200--Sobic003G222700 Sobic009G207200 Sobic009G207200 Sobic001G061200--Sobic009G207200 Sobic001G061200--Sobic008G129600 Sobic002G276800 Sobic002G276800 Sobic001G061200--Sobic002G276800 Sobic002G029300 Sobic002G029300 Sobic001G061200--Sobic002G029300 Sobic003G148900 Sobic003G148900 Sobic001G061200--Sobic003G148900 Sobic001G061200--Sobic001G023100 Sobic009G226400--Sobic001G023100 Sobic003G270600 Sobic003G270600 Sobic009G226400--Sobic003G270600 SobicK004100 SobicK004100 Sobic009G226400--SobicK004100 Sobic001G369000 Sobic001G369000 Sobic009G226400--Sobic001G369000 Sobic009G226400--Sobic002G029300 Sobic001G335900 Sobic001G335900 Sobic009G226400--Sobic001G335900 Sobic009G226400--Sobic006G056200 Sobic004G039600 Sobic004G039600 Sobic009G226400--Sobic004G039600 Sobic001G420800 Sobic001G420800 Sobic009G226400--Sobic001G420800 Sobic006G056200--Sobic004G039600 Sobic006G056200--Sobic008G055900 Sobic006G056200--Sobic008G129600 Sobic003G099300 Sobic003G099300 Sobic006G056200--Sobic003G099300 Sobic006G056200--Sobic009G226400 Sobic006G056200--Sobic008G103300 Sobic006G056200--Sobic001G369000 Sobic006G056200--SobicK004100 Sobic006G056200--Sobic002G029300 Sobic002G341800 Sobic002G341800 Sobic006G044600--Sobic002G341800 Sobic004G194900 Sobic004G194900 Sobic006G044600--Sobic004G194900 Sobic002G394600 Sobic002G394600 Sobic006G044600--Sobic002G394600 Sobic007G184500 Sobic007G184500 Sobic006G044600--Sobic007G184500 Sobic007G166400 Sobic007G166400 Sobic006G044600--Sobic007G166400 Sobic001G458700 Sobic001G458700 Sobic006G044600--Sobic001G458700 Sobic002G077900 Sobic002G077900 Sobic006G044600--Sobic002G077900 Sobic009G058500 Sobic009G058500 Sobic006G044600--Sobic009G058500 Sobic006G044600--Sobic008G055900 Sobic002G378200 Sobic002G378200 Sobic006G278700--Sobic002G378200 Sobic006G252700 Sobic006G252700 Sobic006G278700--Sobic006G252700 Sobic007G205000 Sobic007G205000 Sobic006G278700--Sobic007G205000 Sobic001G360200 Sobic001G360200 Sobic006G278700--Sobic001G360200 Sobic003G401100 Sobic003G401100 Sobic006G278700--Sobic003G401100 Sobic001G143500 Sobic001G143500 Sobic006G278700--Sobic001G143500 Sobic001G226000 Sobic001G226000 Sobic006G278700--Sobic001G226000 Sobic007G118200 Sobic007G118200 Sobic006G278700--Sobic007G118200 Sobic008G004400 Sobic008G004400 Sobic006G278700--Sobic008G004400 Sobic001G023100--Sobic002G029300 Sobic001G023100--Sobic007G173700 Sobic001G023100--Sobic009G226400 Sobic001G023100--Sobic008G055900 Sobic001G161700 Sobic001G161700 Sobic001G023100--Sobic001G161700 Sobic008G072200 Sobic008G072200 Sobic001G023100--Sobic008G072200 Sobic001G023100--Sobic001G193100 Sobic001G023100--Sobic003G270600 Sobic008G085700 Sobic008G085700 Sobic001G023100--Sobic008G085700
Octagon: transcription factors


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