Gene annotation
Transcriptome id Sobic.003G125100.5,Sobic.003G125100.4,Sobic.003G125100.6,Sobic.003G125100.3
Synonym Sb03g010580
Functional annotation uncharacterized Cys-rich domain containing protein, putative, expressed
UniProt C5XGK2
Pfam PF04749
Panther DB PTHR15907 PTHR15907:SF39
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G40935 : PLAC8 family protein
RAP-DB (Rice) LOC_Os01g16210.1 : uncharacterized Cys-rich domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a035254
Brachypodium KQK03815
Barley HORVU3Hr1G037940.10 , HORVU3Hr1G037940.8 , HORVU3Hr1G037940.9 , HORVU3Hr1G037940.2 , HORVU3Hr1G037940.3 , HORVU3Hr1G037940.1 , HORVU3Hr1G037940.4 , HORVU3Hr1G037940.5
Wheat TraesCS3D02G188300 , TraesCS3B02G214000 , TraesCS3A02G184200 , TraesCS3A02G184200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G061200 25.3 kDa vesicle transport protein, putative, expressed K08517: vesicle transport protein SEC22
2 Sobic.003G118400 expressed protein -
3 Sobic.008G111700 expressed protein -
4 Sobic.006G094600 LSM domain containing protein, expressed K12620: U6 snRNA-associated Sm-like protein LSm1
5 Sobic.009G207200 ER lumen protein retaining receptor, putative, expressed K10949: ER lumen protein retaining receptor
6 Sobic.006G257001 - -
7 Sobic.001G404200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17790: mitochondrial import inner membrane translocase subunit TIM22
8 Sobic.001G499000 BTBP1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with pentapeptide repeats, expressed -
9 Sobic.002G029300 pleckstrin homology domain-containing protein, putative, expressed -
10 Sobic.004G031800 expressed protein -
11 Sobic.004G025300 vesicle transport v-SNARE protein, putative, expressed K08495: GOSR1, golgi SNAP receptor complex member 1
12 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
13 Sobic.001G542900 uncharacterized Cys-rich domain containing protein, putative, expressed -
14 Sobic.009G222900 ribosomal protein, putative, expressed K02948: RP-S11, MRPS11, small subunit ribosomal protein S11
15 Sobic.003G023500 syntaxin, putative, expressed K08489: syntaxin 16
16 Sobic.005G184200 WD domain, G-beta repeat domain containing protein, expressed K14003: PREB, prolactin regulatory element-binding protein
17 Sobic.003G319000 universal stress protein domain containing protein, putative, expressed -
18 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
19 Sobic.001G013200 actin-related protein 2/3 complex subunit 4, putative, expressed K05755: actin related protein 2/3 complex, subunit 4
20 Sobic.001G530800 T-complex protein, putative, expressed K09496: T-complex protein 1 subunit delta


Gene co-expression network
sample Sobic003G125100 Sobic003G125100 Sobic001G061200 Sobic001G061200 Sobic003G125100--Sobic001G061200 Sobic003G118400 Sobic003G118400 Sobic003G125100--Sobic003G118400 Sobic008G111700 Sobic008G111700 Sobic003G125100--Sobic008G111700 Sobic006G094600 Sobic006G094600 Sobic003G125100--Sobic006G094600 Sobic009G207200 Sobic009G207200 Sobic003G125100--Sobic009G207200 Sobic006G257001 Sobic006G257001 Sobic003G125100--Sobic006G257001 Sobic001G404200 Sobic001G404200 Sobic003G125100--Sobic001G404200 Sobic001G499000 Sobic001G499000 Sobic003G125100--Sobic001G499000 Sobic002G029300 Sobic002G029300 Sobic003G125100--Sobic002G029300 Sobic001G193100 Sobic001G193100 Sobic001G061200--Sobic001G193100 Sobic007G173700 Sobic007G173700 Sobic001G061200--Sobic007G173700 Sobic003G222700 Sobic003G222700 Sobic001G061200--Sobic003G222700 Sobic001G061200--Sobic009G207200 Sobic008G129600 Sobic008G129600 Sobic001G061200--Sobic008G129600 Sobic002G276800 Sobic002G276800 Sobic001G061200--Sobic002G276800 Sobic001G061200--Sobic002G029300 Sobic003G148900 Sobic003G148900 Sobic001G061200--Sobic003G148900 Sobic001G023100 Sobic001G023100 Sobic001G061200--Sobic001G023100 Sobic002G254500 Sobic002G254500 Sobic003G118400--Sobic002G254500 Sobic001G382200 Sobic001G382200 Sobic003G118400--Sobic001G382200 Sobic001G530800 Sobic001G530800 Sobic003G118400--Sobic001G530800 Sobic004G249300 Sobic004G249300 Sobic003G118400--Sobic004G249300 Sobic002G116500 Sobic002G116500 Sobic003G118400--Sobic002G116500 Sobic003G118400--Sobic003G125100 Sobic009G169200 Sobic009G169200 Sobic003G118400--Sobic009G169200 Sobic003G118400--Sobic006G094600 Sobic003G118400--Sobic003G222700 Sobic001G285300 Sobic001G285300 Sobic008G111700--Sobic001G285300 Sobic003G038600 Sobic003G038600 Sobic008G111700--Sobic003G038600 Sobic001G448200 Sobic001G448200 Sobic008G111700--Sobic001G448200 Sobic001G349400 Sobic001G349400 Sobic008G111700--Sobic001G349400 Sobic003G247900 Sobic003G247900 Sobic008G111700--Sobic003G247900 Sobic003G031200 Sobic003G031200 Sobic008G111700--Sobic003G031200 Sobic003G043400 Sobic003G043400 Sobic008G111700--Sobic003G043400 Sobic008G111700--Sobic006G094600 Sobic006G261100 Sobic006G261100 Sobic008G111700--Sobic006G261100 Sobic008G137600 Sobic008G137600 Sobic006G094600--Sobic008G137600 Sobic006G011000 Sobic006G011000 Sobic006G094600--Sobic006G011000 Sobic003G131300 Sobic003G131300 Sobic006G094600--Sobic003G131300 Sobic001G294900 Sobic001G294900 Sobic006G094600--Sobic001G294900 Sobic001G126200 Sobic001G126200 Sobic006G094600--Sobic001G126200 Sobic006G183000 Sobic006G183000 Sobic006G094600--Sobic006G183000 Sobic006G094600--Sobic001G285300 Sobic002G428200 Sobic002G428200 Sobic006G094600--Sobic002G428200 Sobic010G205300 Sobic010G205300 Sobic006G094600--Sobic010G205300 Sobic009G207200--Sobic006G094600 Sobic009G207200--Sobic001G061200 Sobic001G358500 Sobic001G358500 Sobic009G207200--Sobic001G358500 Sobic009G207200--Sobic002G029300 Sobic003G005900 Sobic003G005900 Sobic009G207200--Sobic003G005900 Sobic007G217400 Sobic007G217400 Sobic009G207200--Sobic007G217400 Sobic008G072200 Sobic008G072200 Sobic009G207200--Sobic008G072200 Sobic004G075200 Sobic004G075200 Sobic009G207200--Sobic004G075200 Sobic007G022700 Sobic007G022700 Sobic009G207200--Sobic007G022700 Sobic001G067900 Sobic001G067900 Sobic006G257001--Sobic001G067900 Sobic006G034800 Sobic006G034800 Sobic006G257001--Sobic006G034800 Sobic001G105100 Sobic001G105100 Sobic006G257001--Sobic001G105100 Sobic001G237500 Sobic001G237500 Sobic006G257001--Sobic001G237500 Sobic001G041200 Sobic001G041200 Sobic006G257001--Sobic001G041200 Sobic002G131900 Sobic002G131900 Sobic006G257001--Sobic002G131900 Sobic010G105600 Sobic010G105600 Sobic006G257001--Sobic010G105600 Sobic003G217100 Sobic003G217100 Sobic006G257001--Sobic003G217100 Sobic002G301300 Sobic002G301300 Sobic006G257001--Sobic002G301300 Sobic001G404200--Sobic006G094600 Sobic001G332300 Sobic001G332300 Sobic001G404200--Sobic001G332300 Sobic007G118000 Sobic007G118000 Sobic001G404200--Sobic007G118000 Sobic003G374000 Sobic003G374000 Sobic001G404200--Sobic003G374000 Sobic005G184200 Sobic005G184200 Sobic001G404200--Sobic005G184200 Sobic008G110500 Sobic008G110500 Sobic001G404200--Sobic008G110500 Sobic007G014900 Sobic007G014900 Sobic001G404200--Sobic007G014900 Sobic001G404200--Sobic003G148900 Sobic008G145100 Sobic008G145100 Sobic001G404200--Sobic008G145100 Sobic003G214300 Sobic003G214300 Sobic001G499000--Sobic003G214300 Sobic008G103300 Sobic008G103300 Sobic001G499000--Sobic008G103300 Sobic001G499000--Sobic008G129600 Sobic001G499000--Sobic001G061200 Sobic009G226400 Sobic009G226400 Sobic001G499000--Sobic009G226400 Sobic006G056200 Sobic006G056200 Sobic001G499000--Sobic006G056200 Sobic006G044600 Sobic006G044600 Sobic001G499000--Sobic006G044600 Sobic006G278700 Sobic006G278700 Sobic001G499000--Sobic006G278700 Sobic001G499000--Sobic001G023100 Sobic002G029300--Sobic001G023100 Sobic002G029300--Sobic007G173700 Sobic004G031800 Sobic004G031800 Sobic002G029300--Sobic004G031800 Sobic002G029300--Sobic008G072200 Sobic001G010700 Sobic001G010700 Sobic002G029300--Sobic001G010700 Sobic002G029300--Sobic009G226400 Sobic001G161700 Sobic001G161700 Sobic002G029300--Sobic001G161700 Sobic002G141700 Sobic002G141700 Sobic002G029300--Sobic002G141700 Sobic002G029300--Sobic006G056200
Octagon: transcription factors


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