Gene annotation
Transcriptome id Sobic.009G207200.1
Synonym AERD2, ERD2, ATERD2, Sb09g026380
Functional annotation ER lumen protein retaining receptor, putative, expressed
UniProt C5Z1G7
Pfam PF00810
Panther DB PTHR10585 PTHR10585:SF26
NCBI CDD KOG3106; ER lumen protein retaining receptor
KEGG Orthology K10949; ER lumen protein retaining receptor
Gene Ontology GO:0016021; integral component of membrane GO:0006621protein retention in ER lumen


Orthologs (automatic annotation)
TAIR AT1G29330 : ER lumen protein retaining receptor family protein
RAP-DB (Rice) LOC_Os05g45310.1 : ER lumen protein retaining receptor, putative, expressed
MaizeGDB (Corn) Zm00025a044273 , Zm00025a038008
Brachypodium KQK05259
Barley HORVU1Hr1G081470.12 , HORVU1Hr1G081470.11 , HORVU1Hr1G081470.10
Wheat TraesCS1A02G349100 , TraesCS1B02G363800
Populus -


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cDNA sequences
Sobic.009G207200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G094600 LSM domain containing protein, expressed K12620: U6 snRNA-associated Sm-like protein LSm1
2 Sobic.001G061200 25.3 kDa vesicle transport protein, putative, expressed K08517: vesicle transport protein SEC22
3 Sobic.001G358500 GA20734-PA, putative, expressed -
4 Sobic.002G029300 pleckstrin homology domain-containing protein, putative, expressed -
5 Sobic.003G005900 abscisic acid insensitive 8, putative, expressed -
6 Sobic.007G217400 COP9 signalosome complex subunit 6a, putative, expressed K12179: COPS6, COP9 signalosome complex subunit 6
7 Sobic.008G072200 coatomer subunit delta, putative, expressed -
8 Sobic.004G075200 protein kinase PKN/PRK1, effector, putative, expressed -
9 Sobic.007G022700 proteasome subunit, putative, expressed K12177: COPS3, COP9 signalosome complex subunit 3
10 Sobic.001G023100 ACBP4, putative, expressed -
11 Sobic.007G165300 SNARE domain containing protein, putative, expressed K08504: blocked early in transport 1
12 Sobic.008G129600 glucosidase II beta subunit-like domain containing protein, expressed K10088: protein OS-9
13 Sobic.003G131300 glycosyl hydrolases family 17 protein, putative, expressed -
14 Sobic.006G219000 OsFBW1 - F-box domain and WD40 repeat containing protein, expressed -
15 Sobic.003G122000 BCAS2 protein, putative, expressed K12861: pre-mRNA-splicing factor SPF27
16 Sobic.004G031800 expressed protein -
17 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
18 Sobic.003G374000 ubiquitin-like domain-containing CTD phosphatase 1, putative, expressed K17618: ubiquitin-like domain-containing CTD phosphatase 1
19 Sobic.003G118400 expressed protein -
20 Sobic.001G506000 N-acetylglucosaminyltransferase, putative, expressed -


Gene co-expression network
sample Sobic009G207200 Sobic009G207200 Sobic006G094600 Sobic006G094600 Sobic009G207200--Sobic006G094600 Sobic001G061200 Sobic001G061200 Sobic009G207200--Sobic001G061200 Sobic001G358500 Sobic001G358500 Sobic009G207200--Sobic001G358500 Sobic002G029300 Sobic002G029300 Sobic009G207200--Sobic002G029300 Sobic003G005900 Sobic003G005900 Sobic009G207200--Sobic003G005900 Sobic007G217400 Sobic007G217400 Sobic009G207200--Sobic007G217400 Sobic008G072200 Sobic008G072200 Sobic009G207200--Sobic008G072200 Sobic004G075200 Sobic004G075200 Sobic009G207200--Sobic004G075200 Sobic007G022700 Sobic007G022700 Sobic009G207200--Sobic007G022700 Sobic008G137600 Sobic008G137600 Sobic006G094600--Sobic008G137600 Sobic006G011000 Sobic006G011000 Sobic006G094600--Sobic006G011000 Sobic003G131300 Sobic003G131300 Sobic006G094600--Sobic003G131300 Sobic001G294900 Sobic001G294900 Sobic006G094600--Sobic001G294900 Sobic001G126200 Sobic001G126200 Sobic006G094600--Sobic001G126200 Sobic006G183000 Sobic006G183000 Sobic006G094600--Sobic006G183000 Sobic001G285300 Sobic001G285300 Sobic006G094600--Sobic001G285300 Sobic002G428200 Sobic002G428200 Sobic006G094600--Sobic002G428200 Sobic010G205300 Sobic010G205300 Sobic006G094600--Sobic010G205300 Sobic001G193100 Sobic001G193100 Sobic001G061200--Sobic001G193100 Sobic007G173700 Sobic007G173700 Sobic001G061200--Sobic007G173700 Sobic003G222700 Sobic003G222700 Sobic001G061200--Sobic003G222700 Sobic001G061200--Sobic009G207200 Sobic008G129600 Sobic008G129600 Sobic001G061200--Sobic008G129600 Sobic002G276800 Sobic002G276800 Sobic001G061200--Sobic002G276800 Sobic001G061200--Sobic002G029300 Sobic003G148900 Sobic003G148900 Sobic001G061200--Sobic003G148900 Sobic001G023100 Sobic001G023100 Sobic001G061200--Sobic001G023100 Sobic001G428800 Sobic001G428800 Sobic001G358500--Sobic001G428800 Sobic010G192600 Sobic010G192600 Sobic001G358500--Sobic010G192600 Sobic008G018500 Sobic008G018500 Sobic001G358500--Sobic008G018500 Sobic008G085700 Sobic008G085700 Sobic001G358500--Sobic008G085700 Sobic001G467100 Sobic001G467100 Sobic001G358500--Sobic001G467100 Sobic003G182300 Sobic003G182300 Sobic001G358500--Sobic003G182300 Sobic006G039400 Sobic006G039400 Sobic001G358500--Sobic006G039400 Sobic001G049400 Sobic001G049400 Sobic001G358500--Sobic001G049400 Sobic001G211900 Sobic001G211900 Sobic001G358500--Sobic001G211900 Sobic002G029300--Sobic001G023100 Sobic002G029300--Sobic007G173700 Sobic004G031800 Sobic004G031800 Sobic002G029300--Sobic004G031800 Sobic002G029300--Sobic008G072200 Sobic001G010700 Sobic001G010700 Sobic002G029300--Sobic001G010700 Sobic009G226400 Sobic009G226400 Sobic002G029300--Sobic009G226400 Sobic001G161700 Sobic001G161700 Sobic002G029300--Sobic001G161700 Sobic002G141700 Sobic002G141700 Sobic002G029300--Sobic002G141700 Sobic006G056200 Sobic006G056200 Sobic002G029300--Sobic006G056200 Sobic005G114500 Sobic005G114500 Sobic003G005900--Sobic005G114500 Sobic003G130900 Sobic003G130900 Sobic003G005900--Sobic003G130900 Sobic006G265600 Sobic006G265600 Sobic003G005900--Sobic006G265600 Sobic003G293000 Sobic003G293000 Sobic003G005900--Sobic003G293000 Sobic001G474400 Sobic001G474400 Sobic003G005900--Sobic001G474400 Sobic004G151200 Sobic004G151200 Sobic003G005900--Sobic004G151200 Sobic001G012900 Sobic001G012900 Sobic003G005900--Sobic001G012900 Sobic002G014800 Sobic002G014800 Sobic003G005900--Sobic002G014800 Sobic003G005900--Sobic009G207200 Sobic001G542900 Sobic001G542900 Sobic007G217400--Sobic001G542900 Sobic009G212300 Sobic009G212300 Sobic007G217400--Sobic009G212300 Sobic006G079900 Sobic006G079900 Sobic007G217400--Sobic006G079900 Sobic007G165300 Sobic007G165300 Sobic007G217400--Sobic007G165300 Sobic007G217400--Sobic008G137600 Sobic009G234400 Sobic009G234400 Sobic007G217400--Sobic009G234400 Sobic007G217400--Sobic009G207200 Sobic002G423800 Sobic002G423800 Sobic007G217400--Sobic002G423800 Sobic006G211800 Sobic006G211800 Sobic007G217400--Sobic006G211800 Sobic002G070600 Sobic002G070600 Sobic008G072200--Sobic002G070600 Sobic008G072200--Sobic001G161700 Sobic004G336300 Sobic004G336300 Sobic008G072200--Sobic004G336300 Sobic001G115700 Sobic001G115700 Sobic008G072200--Sobic001G115700 Sobic001G117800 Sobic001G117800 Sobic008G072200--Sobic001G117800 Sobic008G072200--Sobic002G029300 Sobic001G490500 Sobic001G490500 Sobic008G072200--Sobic001G490500 Sobic003G134800 Sobic003G134800 Sobic008G072200--Sobic003G134800 Sobic008G072200--Sobic008G085700 Sobic004G075200--Sobic009G207200 Sobic001G469200 Sobic001G469200 Sobic004G075200--Sobic001G469200 Sobic008G125000 Sobic008G125000 Sobic004G075200--Sobic008G125000 Sobic004G075200--Sobic001G467100 Sobic007G047600 Sobic007G047600 Sobic004G075200--Sobic007G047600 Sobic006G029400 Sobic006G029400 Sobic004G075200--Sobic006G029400 Sobic004G256300 Sobic004G256300 Sobic004G075200--Sobic004G256300 Sobic003G008600 Sobic003G008600 Sobic004G075200--Sobic003G008600 Sobic006G245700 Sobic006G245700 Sobic004G075200--Sobic006G245700 Sobic007G022700--Sobic004G256300 Sobic007G022700--Sobic003G222700 Sobic003G085500 Sobic003G085500 Sobic007G022700--Sobic003G085500 Sobic002G232400 Sobic002G232400 Sobic007G022700--Sobic002G232400 Sobic007G022700--Sobic009G207200 Sobic004G186100 Sobic004G186100 Sobic007G022700--Sobic004G186100 Sobic001G191900 Sobic001G191900 Sobic007G022700--Sobic001G191900 Sobic006G259900 Sobic006G259900 Sobic007G022700--Sobic006G259900 Sobic007G022700--Sobic003G005900
Octagon: transcription factors


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