Gene annotation
Transcriptome id Sobic.007G165300.2,Sobic.007G165300.1
Synonym ATBS14A, BS14A, BET11, Sb07g023820, ATBET11
Functional annotation SNARE domain containing protein, putative, expressed
UniProt C5YMU3 , C5YMT3
Pfam -
Panther DB PTHR12791 PTHR12791:SF34
NCBI CDD KOG3385; V-SNARE
KEGG Orthology K08504; blocked early in transport 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G58170 : BET1P/SFT1P-like protein 14A
RAP-DB (Rice) LOC_Os08g44930.2,LOC_Os08g44930.1 : SNARE domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a005553
Brachypodium KQJ94682
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G184000 SFT2, putative, expressed -
2 Sobic.007G217400 COP9 signalosome complex subunit 6a, putative, expressed K12179: COPS6, COP9 signalosome complex subunit 6
3 Sobic.009G207200 ER lumen protein retaining receptor, putative, expressed K10949: ER lumen protein retaining receptor
4 Sobic.003G170300 LYR motif containing protein, putative, expressed K03950: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6
5 Sobic.003G028100 MPPN domain containing protein, expressed K14313: NUP35, nuclear pore complex protein Nup53
6 Sobic.001G506000 N-acetylglucosaminyltransferase, putative, expressed -
7 Sobic.005G178300 peptidyl-prolyl cis-trans isomerase, putative, expressed -
8 Sobic.009G201800 MPPN domain containing protein, expressed K14313: NUP35, nuclear pore complex protein Nup53
9 Sobic.010G258000 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
10 Sobic.007G022700 proteasome subunit, putative, expressed K12177: COPS3, COP9 signalosome complex subunit 3
11 Sobic.009G212300 eukaryotic translation initiation factor 3 subunit F, putative, expressed K03249: translation initiation factor 3 subunit F
12 Sobic.006G211800 coatomer subunit epsilon, putative, expressed K17268: coatomer subunit epsilon
13 Sobic.006G259900 reticulon domain containing protein, putative, expressed -
14 Sobic.009G234400 eukaryotic translation initiation factor 3 subunit D, putative, expressed K03251: translation initiation factor 3 subunit D
15 Sobic.003G122000 BCAS2 protein, putative, expressed K12861: pre-mRNA-splicing factor SPF27
16 Sobic.003G216500 vacuolar ATP synthase, putative, expressed K03661: ATPeV0B, V-type H+-transporting ATPase 21kDa proteolipid subunit
17 Sobic.006G050500 methylisocitrate lyase 2, putative, expressed -
18 Sobic.001G469200 proteasome subunit, putative, expressed K12178: COPS4, COP9 signalosome complex subunit 4
19 Sobic.001G473400 NADH dehydrogenase 1 alpha subcomplex subunit 13, putative, expressed K11353: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13
20 Sobic.005G105500 expressed protein -


Gene co-expression network
sample Sobic007G165300 Sobic007G165300 Sobic004G184000 Sobic004G184000 Sobic007G165300--Sobic004G184000 Sobic007G217400 Sobic007G217400 Sobic007G165300--Sobic007G217400 Sobic009G207200 Sobic009G207200 Sobic007G165300--Sobic009G207200 Sobic003G170300 Sobic003G170300 Sobic007G165300--Sobic003G170300 Sobic003G028100 Sobic003G028100 Sobic007G165300--Sobic003G028100 Sobic001G506000 Sobic001G506000 Sobic007G165300--Sobic001G506000 Sobic005G178300 Sobic005G178300 Sobic007G165300--Sobic005G178300 Sobic009G201800 Sobic009G201800 Sobic007G165300--Sobic009G201800 Sobic010G258000 Sobic010G258000 Sobic007G165300--Sobic010G258000 Sobic004G184000--Sobic007G165300 Sobic005G129201 Sobic005G129201 Sobic004G184000--Sobic005G129201 Sobic003G326900 Sobic003G326900 Sobic004G184000--Sobic003G326900 Sobic004G184000--Sobic010G258000 Sobic001G451901 Sobic001G451901 Sobic004G184000--Sobic001G451901 Sobic003G348200 Sobic003G348200 Sobic004G184000--Sobic003G348200 Sobic004G184000--Sobic007G217400 Sobic001G110300 Sobic001G110300 Sobic004G184000--Sobic001G110300 Sobic001G116000 Sobic001G116000 Sobic004G184000--Sobic001G116000 Sobic001G542900 Sobic001G542900 Sobic007G217400--Sobic001G542900 Sobic009G212300 Sobic009G212300 Sobic007G217400--Sobic009G212300 Sobic006G079900 Sobic006G079900 Sobic007G217400--Sobic006G079900 Sobic007G217400--Sobic007G165300 Sobic008G137600 Sobic008G137600 Sobic007G217400--Sobic008G137600 Sobic009G234400 Sobic009G234400 Sobic007G217400--Sobic009G234400 Sobic007G217400--Sobic009G207200 Sobic002G423800 Sobic002G423800 Sobic007G217400--Sobic002G423800 Sobic006G211800 Sobic006G211800 Sobic007G217400--Sobic006G211800 Sobic006G094600 Sobic006G094600 Sobic009G207200--Sobic006G094600 Sobic001G061200 Sobic001G061200 Sobic009G207200--Sobic001G061200 Sobic001G358500 Sobic001G358500 Sobic009G207200--Sobic001G358500 Sobic002G029300 Sobic002G029300 Sobic009G207200--Sobic002G029300 Sobic003G005900 Sobic003G005900 Sobic009G207200--Sobic003G005900 Sobic009G207200--Sobic007G217400 Sobic008G072200 Sobic008G072200 Sobic009G207200--Sobic008G072200 Sobic004G075200 Sobic004G075200 Sobic009G207200--Sobic004G075200 Sobic007G022700 Sobic007G022700 Sobic009G207200--Sobic007G022700 Sobic009G240700 Sobic009G240700 Sobic003G170300--Sobic009G240700 Sobic008G150300 Sobic008G150300 Sobic003G170300--Sobic008G150300 Sobic001G473400 Sobic001G473400 Sobic003G170300--Sobic001G473400 Sobic004G155100 Sobic004G155100 Sobic003G170300--Sobic004G155100 Sobic004G282700 Sobic004G282700 Sobic003G170300--Sobic004G282700 Sobic002G180300 Sobic002G180300 Sobic003G170300--Sobic002G180300 Sobic002G308300 Sobic002G308300 Sobic003G170300--Sobic002G308300 Sobic001G282500 Sobic001G282500 Sobic003G170300--Sobic001G282500 Sobic010G264300 Sobic010G264300 Sobic003G170300--Sobic010G264300 Sobic003G028100--Sobic009G212300 Sobic003G028100--Sobic009G234400 Sobic001G096100 Sobic001G096100 Sobic003G028100--Sobic001G096100 Sobic003G196800 Sobic003G196800 Sobic003G028100--Sobic003G196800 Sobic003G028100--Sobic006G079900 Sobic003G028100--Sobic007G217400 Sobic010G013900 Sobic010G013900 Sobic003G028100--Sobic010G013900 Sobic002G331300 Sobic002G331300 Sobic003G028100--Sobic002G331300 Sobic001G404100 Sobic001G404100 Sobic003G028100--Sobic001G404100 Sobic001G487100 Sobic001G487100 Sobic001G506000--Sobic001G487100 Sobic001G506000--Sobic004G075200 Sobic001G115500 Sobic001G115500 Sobic001G506000--Sobic001G115500 Sobic005G175000 Sobic005G175000 Sobic001G506000--Sobic005G175000 Sobic001G506000--Sobic009G207200 Sobic003G122000 Sobic003G122000 Sobic001G506000--Sobic003G122000 Sobic001G469200 Sobic001G469200 Sobic001G506000--Sobic001G469200 Sobic001G506000--Sobic007G165300 Sobic002G280900 Sobic002G280900 Sobic001G506000--Sobic002G280900 Sobic006G050500 Sobic006G050500 Sobic005G178300--Sobic006G050500 Sobic002G199400 Sobic002G199400 Sobic005G178300--Sobic002G199400 Sobic003G085500 Sobic003G085500 Sobic005G178300--Sobic003G085500 Sobic010G002800 Sobic010G002800 Sobic005G178300--Sobic010G002800 Sobic005G178300--Sobic007G165300 Sobic006G259900 Sobic006G259900 Sobic005G178300--Sobic006G259900 Sobic003G388700 Sobic003G388700 Sobic005G178300--Sobic003G388700 Sobic005G112100 Sobic005G112100 Sobic005G178300--Sobic005G112100 Sobic005G178300--Sobic010G258000 Sobic002G044000 Sobic002G044000 Sobic009G201800--Sobic002G044000 Sobic004G010700 Sobic004G010700 Sobic009G201800--Sobic004G010700 Sobic004G249300 Sobic004G249300 Sobic009G201800--Sobic004G249300 Sobic001G382200 Sobic001G382200 Sobic009G201800--Sobic001G382200 Sobic009G258500 Sobic009G258500 Sobic009G201800--Sobic009G258500 Sobic009G201800--Sobic009G212300 Sobic001G285300 Sobic001G285300 Sobic009G201800--Sobic001G285300 Sobic009G201800--Sobic009G234400 Sobic009G201800--Sobic003G028100 Sobic010G258000--Sobic001G473400 Sobic006G203900 Sobic006G203900 Sobic010G258000--Sobic006G203900 Sobic001G035400 Sobic001G035400 Sobic010G258000--Sobic001G035400 Sobic001G073600 Sobic001G073600 Sobic010G258000--Sobic001G073600 Sobic010G258000--Sobic003G388700 Sobic009G016500 Sobic009G016500 Sobic010G258000--Sobic009G016500 Sobic010G258000--Sobic003G170300 Sobic008G136800 Sobic008G136800 Sobic010G258000--Sobic008G136800 Sobic007G119600 Sobic007G119600 Sobic010G258000--Sobic007G119600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.