Gene annotation
Transcriptome id Sobic.009G201800.1
Synonym Sb09g025930
Functional annotation MPPN domain containing protein, expressed
UniProt C5Z1B7
Pfam PF05172
Panther DB PTHR21527
NCBI CDD -
KEGG Orthology K14313; NUP35, nuclear pore complex protein Nup53
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G16310 : mitotic phosphoprotein N\' end (MPPN) family protein
RAP-DB (Rice) LOC_Os05g44380.1 : MPPN domain containing protein, expressed
MaizeGDB (Corn) Zm00025a037969 , Zm00025a044327
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G044000 WD domain, G-beta repeat domain containing protein, expressed K03246: translation initiation factor 3 subunit I
2 Sobic.004G010700 expressed protein -
3 Sobic.004G249300 proteasome subunit, putative, expressed K15030: translation initiation factor 3 subunit M
4 Sobic.001G382200 eukaryotic translation initiation factor 2 subunit beta, putative, expressed K03238: translation initiation factor 2 subunit 2
5 Sobic.009G258500 notchless protein, putative, expressed K14855: RSA4, ribosome assembly protein 4
6 Sobic.009G212300 eukaryotic translation initiation factor 3 subunit F, putative, expressed K03249: translation initiation factor 3 subunit F
7 Sobic.001G285300 expressed protein -
8 Sobic.009G234400 eukaryotic translation initiation factor 3 subunit D, putative, expressed K03251: translation initiation factor 3 subunit D
9 Sobic.003G028100 MPPN domain containing protein, expressed K14313: NUP35, nuclear pore complex protein Nup53
10 Sobic.010G220900 thioredoxin, putative, expressed K03671: thioredoxin 1
11 Sobic.009G002000 ankyrin repeat family protein, putative, expressed -
12 Sobic.002G054000 ribosomal protein L4, putative, expressed K02930: RP-L4e, large subunit ribosomal protein L4e
13 Sobic.002G386300 exosome complex exonuclease, putative, expressed K12587: MTR3, exosome complex component MTR3
14 Sobic.003G224300 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
15 Sobic.007G217400 COP9 signalosome complex subunit 6a, putative, expressed K12179: COPS6, COP9 signalosome complex subunit 6
16 Sobic.003G410400 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.003G198300 ZOS1-11 - C2H2 zinc finger protein, expressed K15263: cell growth-regulating nucleolar protein
18 Sobic.001G115500 importin-alpha re-exporter, putative, expressed K18423: CSE1, CAS, exportin-2 (importin alpha re-exporter)
19 Sobic.008G162000 rhodanese-like domain containing protein, putative, expressed K01011: TST, MPST, thiosulfate/3-mercaptopyruvate sulfurtransferase
20 Sobic.002G184900 SCO1 protein homolog, mitochondrial precursor, putative, expressed K07152: protein SCO1


Gene co-expression network
sample Sobic009G201800 Sobic009G201800 Sobic002G044000 Sobic002G044000 Sobic009G201800--Sobic002G044000 Sobic004G010700 Sobic004G010700 Sobic009G201800--Sobic004G010700 Sobic004G249300 Sobic004G249300 Sobic009G201800--Sobic004G249300 Sobic001G382200 Sobic001G382200 Sobic009G201800--Sobic001G382200 Sobic009G258500 Sobic009G258500 Sobic009G201800--Sobic009G258500 Sobic009G212300 Sobic009G212300 Sobic009G201800--Sobic009G212300 Sobic001G285300 Sobic001G285300 Sobic009G201800--Sobic001G285300 Sobic009G234400 Sobic009G234400 Sobic009G201800--Sobic009G234400 Sobic003G028100 Sobic003G028100 Sobic009G201800--Sobic003G028100 Sobic002G044000--Sobic009G201800 Sobic003G358300 Sobic003G358300 Sobic002G044000--Sobic003G358300 Sobic009G070200 Sobic009G070200 Sobic002G044000--Sobic009G070200 Sobic002G044000--Sobic001G285300 Sobic006G143500 Sobic006G143500 Sobic002G044000--Sobic006G143500 Sobic004G032000 Sobic004G032000 Sobic002G044000--Sobic004G032000 Sobic001G126200 Sobic001G126200 Sobic002G044000--Sobic001G126200 Sobic007G152400 Sobic007G152400 Sobic002G044000--Sobic007G152400 Sobic002G386300 Sobic002G386300 Sobic002G044000--Sobic002G386300 Sobic004G010700--Sobic009G201800 Sobic004G010700--Sobic009G258500 Sobic002G054000 Sobic002G054000 Sobic004G010700--Sobic002G054000 Sobic002G101000 Sobic002G101000 Sobic004G010700--Sobic002G101000 Sobic002G277200 Sobic002G277200 Sobic004G010700--Sobic002G277200 Sobic006G129900 Sobic006G129900 Sobic004G010700--Sobic006G129900 Sobic004G010700--Sobic001G382200 Sobic004G010700--Sobic009G234400 Sobic009G104100 Sobic009G104100 Sobic004G010700--Sobic009G104100 Sobic002G341800 Sobic002G341800 Sobic004G249300--Sobic002G341800 Sobic004G249300--Sobic009G201800 Sobic001G115500 Sobic001G115500 Sobic004G249300--Sobic001G115500 Sobic002G077900 Sobic002G077900 Sobic004G249300--Sobic002G077900 Sobic008G083400 Sobic008G083400 Sobic004G249300--Sobic008G083400 Sobic010G247400 Sobic010G247400 Sobic004G249300--Sobic010G247400 Sobic003G118400 Sobic003G118400 Sobic004G249300--Sobic003G118400 Sobic009G102900 Sobic009G102900 Sobic004G249300--Sobic009G102900 Sobic001G370300 Sobic001G370300 Sobic004G249300--Sobic001G370300 Sobic001G382200--Sobic009G258500 Sobic001G382200--Sobic009G201800 Sobic001G382200--Sobic003G118400 Sobic001G382200--Sobic002G341800 Sobic001G382200--Sobic009G234400 Sobic002G394600 Sobic002G394600 Sobic001G382200--Sobic002G394600 Sobic008G016100 Sobic008G016100 Sobic001G382200--Sobic008G016100 Sobic001G382200--Sobic004G010700 Sobic001G530800 Sobic001G530800 Sobic001G382200--Sobic001G530800 Sobic009G258500--Sobic001G382200 Sobic009G258500--Sobic004G010700 Sobic009G258500--Sobic009G201800 Sobic003G198300 Sobic003G198300 Sobic009G258500--Sobic003G198300 Sobic006G226500 Sobic006G226500 Sobic009G258500--Sobic006G226500 Sobic004G252000 Sobic004G252000 Sobic009G258500--Sobic004G252000 Sobic004G047200 Sobic004G047200 Sobic009G258500--Sobic004G047200 Sobic009G258500--Sobic008G016100 Sobic009G258500--Sobic004G249300 Sobic009G212300--Sobic009G234400 Sobic003G196800 Sobic003G196800 Sobic009G212300--Sobic003G196800 Sobic001G096100 Sobic001G096100 Sobic009G212300--Sobic001G096100 Sobic006G231500 Sobic006G231500 Sobic009G212300--Sobic006G231500 Sobic003G308000 Sobic003G308000 Sobic009G212300--Sobic003G308000 Sobic001G404100 Sobic001G404100 Sobic009G212300--Sobic001G404100 Sobic007G217400 Sobic007G217400 Sobic009G212300--Sobic007G217400 Sobic001G481700 Sobic001G481700 Sobic009G212300--Sobic001G481700 Sobic006G211800 Sobic006G211800 Sobic009G212300--Sobic006G211800 Sobic008G111700 Sobic008G111700 Sobic001G285300--Sobic008G111700 Sobic001G532100 Sobic001G532100 Sobic001G285300--Sobic001G532100 Sobic001G285300--Sobic006G143500 Sobic001G285300--Sobic002G044000 Sobic001G036700 Sobic001G036700 Sobic001G285300--Sobic001G036700 Sobic001G285300--Sobic001G126200 Sobic003G420700 Sobic003G420700 Sobic001G285300--Sobic003G420700 Sobic001G402300 Sobic001G402300 Sobic001G285300--Sobic001G402300 Sobic006G094600 Sobic006G094600 Sobic001G285300--Sobic006G094600 Sobic009G234400--Sobic009G212300 Sobic009G234400--Sobic006G211800 Sobic009G234400--Sobic002G341800 Sobic009G234400--Sobic001G404100 Sobic005G105500 Sobic005G105500 Sobic009G234400--Sobic005G105500 Sobic009G234400--Sobic003G028100 Sobic009G234400--Sobic001G481700 Sobic009G234400--Sobic006G231500 Sobic002G087000 Sobic002G087000 Sobic009G234400--Sobic002G087000 Sobic003G028100--Sobic009G212300 Sobic003G028100--Sobic009G234400 Sobic003G028100--Sobic001G096100 Sobic003G028100--Sobic003G196800 Sobic006G079900 Sobic006G079900 Sobic003G028100--Sobic006G079900 Sobic003G028100--Sobic007G217400 Sobic010G013900 Sobic010G013900 Sobic003G028100--Sobic010G013900 Sobic002G331300 Sobic002G331300 Sobic003G028100--Sobic002G331300 Sobic003G028100--Sobic001G404100
Octagon: transcription factors


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