Gene annotation
Transcriptome id Sobic.001G115500.1
Synonym Sb01g010190
Functional annotation importin-alpha re-exporter, putative, expressed
UniProt C5WN20
Pfam PF03810 PF03378 PF08506
Panther DB PTHR10997 PTHR10997:SF8
NCBI CDD -
KEGG Orthology K18423; CSE1, CAS, exportin-2 (importin alpha re-exporter)
Gene Ontology GO:0008536; Ran GTPase binding GO:0006886intracellular protein transport GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT2G46520 : cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter, putative
RAP-DB (Rice) LOC_Os01g13430.1 : importin-alpha re-exporter, putative, expressed
MaizeGDB (Corn) Zm00025a007877 , Zm00025a016951
Brachypodium KQK03472
Barley HORVU3Hr1G057320.1
Wheat TraesCS3A02G158500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G125000 AP-3 complex subunit delta, putative, expressed K12396: AP-3 complex subunit delta
2 Sobic.001G008500 metallo-beta-lactamase, putative, expressed K14403: CPSF3, cleavage and polyadenylation specificity factor subunit 3
3 Sobic.003G008600 eukaryotic translation initiation factor 3 subunit E-interacting protein, putative, expressed K15029: translation initiation factor 3 subunit L
4 Sobic.004G249300 proteasome subunit, putative, expressed K15030: translation initiation factor 3 subunit M
5 Sobic.009G102900 importin subunit beta, putative, expressed K14293: KPNB1, importin subunit beta-1
6 Sobic.002G208400 regulator protein, putative, expressed -
7 Sobic.002G264300 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
8 Sobic.001G436300 nucleotide-sensitive chloride conductance regulator containing protein, expressed K05019: chloride channel, nucleotide-sensitive, 1A
9 Sobic.001G373000 nucleoporin interacting component, putative, expressed K14309: NUP93, nuclear pore complex protein Nup93
10 Sobic.002G399900 OsRhmbd13 - Putative Rhomboid homologue, expressed -
11 Sobic.001G469200 proteasome subunit, putative, expressed K12178: COPS4, COP9 signalosome complex subunit 4
12 Sobic.006G245700 COP9 signalosome complex subunit 5b, putative, expressed K09613: COPS5, COP9 signalosome complex subunit 5
13 Sobic.002G142700 PPR repeat containing protein, putative, expressed -
14 Sobic.009G002000 ankyrin repeat family protein, putative, expressed -
15 Sobic.001G506000 N-acetylglucosaminyltransferase, putative, expressed -
16 Sobic.004G015300 expressed protein K16587: HAUS augmin-like complex subunit 4
17 Sobic.003G259600 ORC4 - Putative origin recognition complex subunit 4, expressed K02606: origin recognition complex subunit 4
18 Sobic.009G201800 MPPN domain containing protein, expressed K14313: NUP35, nuclear pore complex protein Nup53
19 Sobic.006G265600 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
20 Sobic.009G060400 proline-rich family protein, putative, expressed -


Gene co-expression network
sample Sobic001G115500 Sobic001G115500 Sobic008G125000 Sobic008G125000 Sobic001G115500--Sobic008G125000 Sobic001G008500 Sobic001G008500 Sobic001G115500--Sobic001G008500 Sobic003G008600 Sobic003G008600 Sobic001G115500--Sobic003G008600 Sobic004G249300 Sobic004G249300 Sobic001G115500--Sobic004G249300 Sobic009G102900 Sobic009G102900 Sobic001G115500--Sobic009G102900 Sobic002G208400 Sobic002G208400 Sobic001G115500--Sobic002G208400 Sobic002G264300 Sobic002G264300 Sobic001G115500--Sobic002G264300 Sobic001G436300 Sobic001G436300 Sobic001G115500--Sobic001G436300 Sobic001G373000 Sobic001G373000 Sobic001G115500--Sobic001G373000 Sobic009G056300 Sobic009G056300 Sobic008G125000--Sobic009G056300 Sobic008G125000--Sobic001G115500 Sobic006G245700 Sobic006G245700 Sobic008G125000--Sobic006G245700 Sobic003G307900 Sobic003G307900 Sobic008G125000--Sobic003G307900 Sobic004G075200 Sobic004G075200 Sobic008G125000--Sobic004G075200 Sobic009G120500 Sobic009G120500 Sobic008G125000--Sobic009G120500 Sobic007G010900 Sobic007G010900 Sobic008G125000--Sobic007G010900 Sobic006G041100 Sobic006G041100 Sobic008G125000--Sobic006G041100 Sobic004G358900 Sobic004G358900 Sobic008G125000--Sobic004G358900 Sobic004G047200 Sobic004G047200 Sobic001G008500--Sobic004G047200 Sobic006G251600 Sobic006G251600 Sobic001G008500--Sobic006G251600 Sobic001G008500--Sobic003G008600 Sobic001G008500--Sobic001G115500 Sobic009G071700 Sobic009G071700 Sobic001G008500--Sobic009G071700 Sobic010G188000 Sobic010G188000 Sobic001G008500--Sobic010G188000 Sobic001G008500--Sobic001G436300 Sobic002G423500 Sobic002G423500 Sobic001G008500--Sobic002G423500 Sobic001G371100 Sobic001G371100 Sobic001G008500--Sobic001G371100 Sobic003G008600--Sobic001G008500 Sobic003G008600--Sobic001G115500 Sobic003G008600--Sobic002G423500 Sobic002G365900 Sobic002G365900 Sobic003G008600--Sobic002G365900 Sobic003G008600--Sobic002G208400 Sobic004G215700 Sobic004G215700 Sobic003G008600--Sobic004G215700 Sobic001G460500 Sobic001G460500 Sobic003G008600--Sobic001G460500 Sobic003G008600--Sobic004G075200 Sobic003G130000 Sobic003G130000 Sobic003G008600--Sobic003G130000 Sobic002G341800 Sobic002G341800 Sobic004G249300--Sobic002G341800 Sobic009G201800 Sobic009G201800 Sobic004G249300--Sobic009G201800 Sobic004G249300--Sobic001G115500 Sobic002G077900 Sobic002G077900 Sobic004G249300--Sobic002G077900 Sobic008G083400 Sobic008G083400 Sobic004G249300--Sobic008G083400 Sobic010G247400 Sobic010G247400 Sobic004G249300--Sobic010G247400 Sobic003G118400 Sobic003G118400 Sobic004G249300--Sobic003G118400 Sobic004G249300--Sobic009G102900 Sobic001G370300 Sobic001G370300 Sobic004G249300--Sobic001G370300 Sobic009G102900--Sobic001G115500 Sobic003G198300 Sobic003G198300 Sobic009G102900--Sobic003G198300 Sobic001G178400 Sobic001G178400 Sobic009G102900--Sobic001G178400 Sobic009G102900--Sobic004G249300 Sobic008G118500 Sobic008G118500 Sobic009G102900--Sobic008G118500 Sobic009G002000 Sobic009G002000 Sobic009G102900--Sobic009G002000 Sobic009G102900--Sobic001G008500 Sobic001G346300 Sobic001G346300 Sobic009G102900--Sobic001G346300 Sobic009G102900--Sobic004G047200 Sobic002G142700 Sobic002G142700 Sobic002G208400--Sobic002G142700 Sobic002G208400--Sobic001G115500 Sobic009G113100 Sobic009G113100 Sobic002G208400--Sobic009G113100 Sobic006G032600 Sobic006G032600 Sobic002G208400--Sobic006G032600 Sobic002G208400--Sobic003G008600 Sobic004G030400 Sobic004G030400 Sobic002G208400--Sobic004G030400 Sobic003G259600 Sobic003G259600 Sobic002G208400--Sobic003G259600 Sobic001G123600 Sobic001G123600 Sobic002G208400--Sobic001G123600 Sobic003G129300 Sobic003G129300 Sobic002G208400--Sobic003G129300 Sobic002G264300--Sobic001G115500 Sobic010G073500 Sobic010G073500 Sobic002G264300--Sobic010G073500 Sobic002G126800 Sobic002G126800 Sobic002G264300--Sobic002G126800 Sobic009G151800 Sobic009G151800 Sobic002G264300--Sobic009G151800 Sobic002G264300--Sobic001G373000 Sobic002G264300--Sobic001G008500 Sobic002G264300--Sobic004G030400 Sobic006G071628 Sobic006G071628 Sobic002G264300--Sobic006G071628 Sobic002G264300--Sobic004G075200 Sobic006G127500 Sobic006G127500 Sobic001G436300--Sobic006G127500 Sobic001G235700 Sobic001G235700 Sobic001G436300--Sobic001G235700 Sobic001G436300--Sobic001G115500 Sobic003G274400 Sobic003G274400 Sobic001G436300--Sobic003G274400 Sobic001G436300--Sobic001G008500 Sobic001G436300--Sobic006G245700 Sobic004G343600 Sobic004G343600 Sobic001G436300--Sobic004G343600 Sobic002G317600 Sobic002G317600 Sobic001G436300--Sobic002G317600 Sobic001G097400 Sobic001G097400 Sobic001G436300--Sobic001G097400 Sobic009G104900 Sobic009G104900 Sobic001G373000--Sobic009G104900 Sobic004G038100 Sobic004G038100 Sobic001G373000--Sobic004G038100 Sobic002G005000 Sobic002G005000 Sobic001G373000--Sobic002G005000 Sobic001G373000--Sobic003G259600 Sobic003G361400 Sobic003G361400 Sobic001G373000--Sobic003G361400 Sobic001G373000--Sobic010G188000 Sobic001G373000--Sobic002G126800 Sobic001G013300 Sobic001G013300 Sobic001G373000--Sobic001G013300 Sobic005G028100 Sobic005G028100 Sobic001G373000--Sobic005G028100
Octagon: transcription factors


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