Gene annotation
Transcriptome id Sobic.009G060400.1
Synonym Sb09g005090
Functional annotation proline-rich family protein, putative, expressed
UniProt C5Z130
Pfam PF07223
Panther DB PTHR31805 PTHR31805:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G28300 : Protein of unknown function (DUF1421)
RAP-DB (Rice) LOC_Os05g07730.1 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a023265 , Zm00025a035715
Brachypodium KQK02888 , KQK07299
Barley HORVU1Hr1G025020.8 , HORVU1Hr1G025020.4 , HORVU1Hr1G025020.7
Wheat TraesCS1B02G134000 , TraesCS1A02G113700 , TraesCS1D02G115300
Populus -


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cDNA sequences
Sobic.009G060400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G245700 COP9 signalosome complex subunit 5b, putative, expressed K09613: COPS5, COP9 signalosome complex subunit 5
2 Sobic.007G036800 xylosyltransferase, putative, expressed -
3 Sobic.010G256200 expressed protein -
4 Sobic.001G346700 Ser/Thr protein phosphatase family protein, putative, expressed -
5 Sobic.001G425200 expressed protein -
6 Sobic.003G304800 OsRhmbd4 - Putative Rhomboid homologue, expressed -
7 Sobic.001G115500 importin-alpha re-exporter, putative, expressed K18423: CSE1, CAS, exportin-2 (importin alpha re-exporter)
8 Sobic.006G091850 - -
9 Sobic.008G125000 AP-3 complex subunit delta, putative, expressed K12396: AP-3 complex subunit delta
10 Sobic.009G192500 OsFBX169 - F-box domain containing protein, expressed -
11 Sobic.003G415100 BTBM1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
12 Sobic.004G015300 expressed protein K16587: HAUS augmin-like complex subunit 4
13 Sobic.001G296800 WD repeat-containing protein 8, putative, expressed -
14 Sobic.002G252900 DNA repair ATPase-related, putative, expressed -
15 Sobic.010G052400 SET domain containing protein, expressed K11430: [histone H3]-lysine27 N-trimethyltransferase EZH2
16 Sobic.009G131500 aquaporin protein, putative, expressed K09875: aquaporin SIP
17 Sobic.010G103500 ATMAP70 protein, putative, expressed -
18 Sobic.007G192100 emp24/gp25L/p24 family protein, putative, expressed -
19 Sobic.002G253900 growth regulator related protein, putative, expressed -
20 Sobic.003G410200 ubiquitin-conjugating enzyme E2-22 kDa, putative, expressed K04649: HIP2, ubiquitin-conjugating enzyme (huntingtin interacting protein 2)


Gene co-expression network
sample Sobic009G060400 Sobic009G060400 Sobic006G245700 Sobic006G245700 Sobic009G060400--Sobic006G245700 Sobic007G036800 Sobic007G036800 Sobic009G060400--Sobic007G036800 Sobic010G256200 Sobic010G256200 Sobic009G060400--Sobic010G256200 Sobic001G346700 Sobic001G346700 Sobic009G060400--Sobic001G346700 Sobic001G425200 Sobic001G425200 Sobic009G060400--Sobic001G425200 Sobic003G304800 Sobic003G304800 Sobic009G060400--Sobic003G304800 Sobic001G115500 Sobic001G115500 Sobic009G060400--Sobic001G115500 Sobic006G091850 Sobic006G091850 Sobic009G060400--Sobic006G091850 Sobic008G125000 Sobic008G125000 Sobic009G060400--Sobic008G125000 Sobic004G256300 Sobic004G256300 Sobic006G245700--Sobic004G256300 Sobic001G370300 Sobic001G370300 Sobic006G245700--Sobic001G370300 Sobic006G245700--Sobic008G125000 Sobic003G274400 Sobic003G274400 Sobic006G245700--Sobic003G274400 Sobic006G245700--Sobic001G115500 Sobic002G394800 Sobic002G394800 Sobic006G245700--Sobic002G394800 Sobic001G436300 Sobic001G436300 Sobic006G245700--Sobic001G436300 Sobic003G221500 Sobic003G221500 Sobic006G245700--Sobic003G221500 Sobic001G157600 Sobic001G157600 Sobic006G245700--Sobic001G157600 Sobic004G129500 Sobic004G129500 Sobic007G036800--Sobic004G129500 Sobic010G103500 Sobic010G103500 Sobic007G036800--Sobic010G103500 Sobic004G145600 Sobic004G145600 Sobic007G036800--Sobic004G145600 Sobic008G112100 Sobic008G112100 Sobic007G036800--Sobic008G112100 Sobic010G059700 Sobic010G059700 Sobic007G036800--Sobic010G059700 Sobic007G010200 Sobic007G010200 Sobic007G036800--Sobic007G010200 Sobic004G350200 Sobic004G350200 Sobic007G036800--Sobic004G350200 Sobic002G123600 Sobic002G123600 Sobic007G036800--Sobic002G123600 Sobic007G036800--Sobic004G256300 Sobic010G256200--Sobic001G157600 Sobic001G123201 Sobic001G123201 Sobic010G256200--Sobic001G123201 Sobic004G242000 Sobic004G242000 Sobic010G256200--Sobic004G242000 Sobic002G051200 Sobic002G051200 Sobic010G256200--Sobic002G051200 Sobic001G154400 Sobic001G154400 Sobic010G256200--Sobic001G154400 Sobic010G256200--Sobic009G060400 Sobic009G030400 Sobic009G030400 Sobic010G256200--Sobic009G030400 Sobic004G318400 Sobic004G318400 Sobic010G256200--Sobic004G318400 Sobic004G272900 Sobic004G272900 Sobic010G256200--Sobic004G272900 Sobic009G129600 Sobic009G129600 Sobic001G346700--Sobic009G129600 Sobic004G347100 Sobic004G347100 Sobic001G346700--Sobic004G347100 Sobic003G415100 Sobic003G415100 Sobic001G346700--Sobic003G415100 Sobic003G354100 Sobic003G354100 Sobic001G346700--Sobic003G354100 Sobic007G188900 Sobic007G188900 Sobic001G346700--Sobic007G188900 Sobic002G148400 Sobic002G148400 Sobic001G346700--Sobic002G148400 Sobic007G139400 Sobic007G139400 Sobic001G346700--Sobic007G139400 Sobic002G268900 Sobic002G268900 Sobic001G346700--Sobic002G268900 Sobic002G334600 Sobic002G334600 Sobic001G346700--Sobic002G334600 Sobic003G411700 Sobic003G411700 Sobic001G425200--Sobic003G411700 Sobic004G041100 Sobic004G041100 Sobic001G425200--Sobic004G041100 Sobic001G425200--Sobic010G103500 Sobic001G212600 Sobic001G212600 Sobic001G425200--Sobic001G212600 Sobic002G271400 Sobic002G271400 Sobic001G425200--Sobic002G271400 Sobic004G306100 Sobic004G306100 Sobic001G425200--Sobic004G306100 Sobic003G336900 Sobic003G336900 Sobic001G425200--Sobic003G336900 Sobic005G160200 Sobic005G160200 Sobic001G425200--Sobic005G160200 Sobic003G298900 Sobic003G298900 Sobic001G425200--Sobic003G298900 Sobic009G122900 Sobic009G122900 Sobic003G304800--Sobic009G122900 Sobic003G304800--Sobic007G010200 Sobic001G472100 Sobic001G472100 Sobic003G304800--Sobic001G472100 Sobic003G304800--Sobic008G112100 Sobic003G331000 Sobic003G331000 Sobic003G304800--Sobic003G331000 Sobic003G304800--Sobic007G036800 Sobic003G304800--Sobic009G060400 Sobic003G304800--Sobic005G160200 Sobic003G304800--Sobic001G425200 Sobic001G115500--Sobic008G125000 Sobic001G008500 Sobic001G008500 Sobic001G115500--Sobic001G008500 Sobic003G008600 Sobic003G008600 Sobic001G115500--Sobic003G008600 Sobic004G249300 Sobic004G249300 Sobic001G115500--Sobic004G249300 Sobic009G102900 Sobic009G102900 Sobic001G115500--Sobic009G102900 Sobic002G208400 Sobic002G208400 Sobic001G115500--Sobic002G208400 Sobic002G264300 Sobic002G264300 Sobic001G115500--Sobic002G264300 Sobic001G115500--Sobic001G436300 Sobic001G373000 Sobic001G373000 Sobic001G115500--Sobic001G373000 Sobic006G170700 Sobic006G170700 Sobic006G091850--Sobic006G170700 Sobic006G091850--Sobic005G160200 Sobic002G315100 Sobic002G315100 Sobic006G091850--Sobic002G315100 Sobic004G207100 Sobic004G207100 Sobic006G091850--Sobic004G207100 Sobic006G091850--Sobic003G415100 Sobic001G154200 Sobic001G154200 Sobic006G091850--Sobic001G154200 Sobic006G091850--Sobic001G425200 Sobic006G184200 Sobic006G184200 Sobic006G091850--Sobic006G184200 Sobic006G091850--Sobic009G060400 Sobic009G056300 Sobic009G056300 Sobic008G125000--Sobic009G056300 Sobic008G125000--Sobic001G115500 Sobic008G125000--Sobic006G245700 Sobic003G307900 Sobic003G307900 Sobic008G125000--Sobic003G307900 Sobic004G075200 Sobic004G075200 Sobic008G125000--Sobic004G075200 Sobic009G120500 Sobic009G120500 Sobic008G125000--Sobic009G120500 Sobic007G010900 Sobic007G010900 Sobic008G125000--Sobic007G010900 Sobic006G041100 Sobic006G041100 Sobic008G125000--Sobic006G041100 Sobic004G358900 Sobic004G358900 Sobic008G125000--Sobic004G358900
Octagon: transcription factors


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