Gene annotation
Transcriptome id Sobic.004G015300.1
Synonym Sb04g001450
Functional annotation expressed protein
UniProt C5XSE1
Pfam PF14735
Panther DB PTHR16219 PTHR16219:SF1
NCBI CDD -
KEGG Orthology K16587; HAUS augmin-like complex subunit 4
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G50710 : -
RAP-DB (Rice) LOC_Os02g02690.1 : expressed protein
MaizeGDB (Corn) Zm00025a018737
Brachypodium KQJ92942 , KQJ92943 , KQJ92944 , PNT65745
Barley HORVU6Hr1G011140.3 , HORVU6Hr1G011140.2 , HORVU6Hr1G011140.7 , HORVU6Hr1G011140.6 , HORVU6Hr1G011140.5 , HORVU6Hr1G011140.8
Wheat TraesCS6A02G059500 , TraesCS6B02G079900 , TraesCSU02G121900 , TraesCSU02G121900
Populus -


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cDNA sequences
Sobic.004G015300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G296800 WD repeat-containing protein 8, putative, expressed -
2 Sobic.006G122200 glycosyl hydrolase family 5 protein, putative, expressed -
3 Sobic.009G212100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
4 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
5 Sobic.005G047000 ubiquinol-cytochrome C reductase hinge protein, putative, expressed K00416: QCR6, ubiquinol-cytochrome c reductase subunit 6
6 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
7 Sobic.006G245700 COP9 signalosome complex subunit 5b, putative, expressed K09613: COPS5, COP9 signalosome complex subunit 5
8 Sobic.007G084200 expressed protein -
9 Sobic.001G115500 importin-alpha re-exporter, putative, expressed K18423: CSE1, CAS, exportin-2 (importin alpha re-exporter)
10 Sobic.010G103500 ATMAP70 protein, putative, expressed -
11 Sobic.006G267500 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
12 Sobic.009G119700 acetyltransferase, GNAT family, putative, expressed -
13 Sobic.001G369800 monocopper oxidase, putative, expressed -
14 Sobic.009G060400 proline-rich family protein, putative, expressed -
15 Sobic.004G010700 expressed protein -
16 Sobic.010G052400 SET domain containing protein, expressed K11430: [histone H3]-lysine27 N-trimethyltransferase EZH2
17 Sobic.003G226700 kinesin motor domain containing protein, putative, expressed K10393: KIF2_24, kinesin family member 2/24
18 Sobic.006G218900 TKL_IRAK_CrRLK1L-1.9 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
19 Sobic.002G253900 growth regulator related protein, putative, expressed -
20 Sobic.001G436300 nucleotide-sensitive chloride conductance regulator containing protein, expressed K05019: chloride channel, nucleotide-sensitive, 1A


Gene co-expression network
sample Sobic004G015300 Sobic004G015300 Sobic001G296800 Sobic001G296800 Sobic004G015300--Sobic001G296800 Sobic006G122200 Sobic006G122200 Sobic004G015300--Sobic006G122200 Sobic009G212100 Sobic009G212100 Sobic004G015300--Sobic009G212100 Sobic004G315700 Sobic004G315700 Sobic004G015300--Sobic004G315700 Sobic005G047000 Sobic005G047000 Sobic004G015300--Sobic005G047000 Sobic001G487200 Sobic001G487200 Sobic004G015300--Sobic001G487200 Sobic006G245700 Sobic006G245700 Sobic004G015300--Sobic006G245700 Sobic007G084200 Sobic007G084200 Sobic004G015300--Sobic007G084200 Sobic001G115500 Sobic001G115500 Sobic004G015300--Sobic001G115500 Sobic001G296800--Sobic009G212100 Sobic001G296800--Sobic004G315700 Sobic010G103500 Sobic010G103500 Sobic001G296800--Sobic010G103500 Sobic001G296800--Sobic001G487200 Sobic004G129500 Sobic004G129500 Sobic001G296800--Sobic004G129500 Sobic001G361200 Sobic001G361200 Sobic001G296800--Sobic001G361200 Sobic002G370400 Sobic002G370400 Sobic001G296800--Sobic002G370400 Sobic001G212600 Sobic001G212600 Sobic001G296800--Sobic001G212600 Sobic009G052100 Sobic009G052100 Sobic001G296800--Sobic009G052100 Sobic006G122200--Sobic004G015300 Sobic002G232400 Sobic002G232400 Sobic006G122200--Sobic002G232400 Sobic006G236800 Sobic006G236800 Sobic006G122200--Sobic006G236800 Sobic006G122200--Sobic005G047000 Sobic006G122200--Sobic001G296800 Sobic003G297200 Sobic003G297200 Sobic006G122200--Sobic003G297200 Sobic002G387800 Sobic002G387800 Sobic006G122200--Sobic002G387800 Sobic010G002800 Sobic010G002800 Sobic006G122200--Sobic010G002800 Sobic007G022700 Sobic007G022700 Sobic006G122200--Sobic007G022700 Sobic009G212100--Sobic001G487200 Sobic009G212100--Sobic004G315700 Sobic009G212100--Sobic001G296800 Sobic003G226700 Sobic003G226700 Sobic009G212100--Sobic003G226700 Sobic009G212100--Sobic007G084200 Sobic006G267500 Sobic006G267500 Sobic009G212100--Sobic006G267500 Sobic006G084300 Sobic006G084300 Sobic009G212100--Sobic006G084300 Sobic001G369800 Sobic001G369800 Sobic009G212100--Sobic001G369800 Sobic006G254500 Sobic006G254500 Sobic009G212100--Sobic006G254500 Sobic004G315700--Sobic001G487200 Sobic004G315700--Sobic009G212100 Sobic004G315700--Sobic001G296800 Sobic004G315700--Sobic009G052100 Sobic004G315700--Sobic006G084300 Sobic003G420300 Sobic003G420300 Sobic004G315700--Sobic003G420300 Sobic006G218900 Sobic006G218900 Sobic004G315700--Sobic006G218900 Sobic003G345000 Sobic003G345000 Sobic004G315700--Sobic003G345000 Sobic001G540700 Sobic001G540700 Sobic004G315700--Sobic001G540700 Sobic009G119700 Sobic009G119700 Sobic005G047000--Sobic009G119700 Sobic006G129900 Sobic006G129900 Sobic005G047000--Sobic006G129900 Sobic007G044400 Sobic007G044400 Sobic005G047000--Sobic007G044400 Sobic005G047000--Sobic004G015300 Sobic001G347901 Sobic001G347901 Sobic005G047000--Sobic001G347901 Sobic007G176800 Sobic007G176800 Sobic005G047000--Sobic007G176800 Sobic009G151700 Sobic009G151700 Sobic005G047000--Sobic009G151700 Sobic004G010700 Sobic004G010700 Sobic005G047000--Sobic004G010700 Sobic009G189200 Sobic009G189200 Sobic005G047000--Sobic009G189200 Sobic001G487200--Sobic004G315700 Sobic001G487200--Sobic009G212100 Sobic001G487200--Sobic001G369800 Sobic001G231200 Sobic001G231200 Sobic001G487200--Sobic001G231200 Sobic001G487200--Sobic002G370400 Sobic001G487200--Sobic003G226700 Sobic001G487200--Sobic001G540700 Sobic001G487200--Sobic001G296800 Sobic001G487200--Sobic007G084200 Sobic004G256300 Sobic004G256300 Sobic006G245700--Sobic004G256300 Sobic001G370300 Sobic001G370300 Sobic006G245700--Sobic001G370300 Sobic008G125000 Sobic008G125000 Sobic006G245700--Sobic008G125000 Sobic003G274400 Sobic003G274400 Sobic006G245700--Sobic003G274400 Sobic006G245700--Sobic001G115500 Sobic002G394800 Sobic002G394800 Sobic006G245700--Sobic002G394800 Sobic001G436300 Sobic001G436300 Sobic006G245700--Sobic001G436300 Sobic003G221500 Sobic003G221500 Sobic006G245700--Sobic003G221500 Sobic001G157600 Sobic001G157600 Sobic006G245700--Sobic001G157600 Sobic007G084200--Sobic003G226700 Sobic007G084200--Sobic009G212100 Sobic007G084200--Sobic003G420300 Sobic007G084200--Sobic001G487200 Sobic007G084200--Sobic003G345000 Sobic003G292700 Sobic003G292700 Sobic007G084200--Sobic003G292700 Sobic007G084200--Sobic006G218900 Sobic007G084200--Sobic001G369800 Sobic007G084200--Sobic004G315700 Sobic001G115500--Sobic008G125000 Sobic001G008500 Sobic001G008500 Sobic001G115500--Sobic001G008500 Sobic003G008600 Sobic003G008600 Sobic001G115500--Sobic003G008600 Sobic004G249300 Sobic004G249300 Sobic001G115500--Sobic004G249300 Sobic009G102900 Sobic009G102900 Sobic001G115500--Sobic009G102900 Sobic002G208400 Sobic002G208400 Sobic001G115500--Sobic002G208400 Sobic002G264300 Sobic002G264300 Sobic001G115500--Sobic002G264300 Sobic001G115500--Sobic001G436300 Sobic001G373000 Sobic001G373000 Sobic001G115500--Sobic001G373000
Octagon: transcription factors


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