Gene annotation
Transcriptome id Sobic.006G218900.1
Synonym HERK2, Sb06g028840
Functional annotation TKL_IRAK_CrRLK1L-1.9 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed
UniProt C5YG48
Pfam PF11721 PF07714
Panther DB PTHR27003 PTHR27003:SF41
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G30570 : hercules receptor kinase 2
RAP-DB (Rice) LOC_Os04g52860.1 : TKL_IRAK_CrRLK1L-1.9 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed
MaizeGDB (Corn) Zm00025a009744
Brachypodium PNT61865
Barley HORVU2Hr1G103780.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
2 Sobic.001G369800 monocopper oxidase, putative, expressed -
3 Sobic.003G226700 kinesin motor domain containing protein, putative, expressed K10393: KIF2_24, kinesin family member 2/24
4 Sobic.001G540700 expressed protein -
5 Sobic.002G253900 growth regulator related protein, putative, expressed -
6 Sobic.003G345000 CAMK_CAMK_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
7 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
8 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
9 Sobic.007G084200 expressed protein -
10 Sobic.009G212100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
11 Sobic.002G006100 phytosulfokine receptor precursor, putative, expressed -
12 Sobic.007G166800 domain of unknown function DUF966 domain containing protein, expressed -
13 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
14 Sobic.006G272800 Most C2 domain protein(PubMedID : 29491869)@anthranilate phosphoribosyltransferase, putative, expressed -
15 Sobic.003G420300 zinc finger protein, putative, expressed -
16 Sobic.002G027600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
17 Sobic.009G172950 - K02541: DNA replication licensing factor MCM3
18 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
19 Sobic.001G123100 Os3bglu8 - beta-glucosidase, exo-beta-glucansase, high similarity to Os3bglu7, expressed K05350: beta-glucosidase
20 Sobic.001G212600 a_IG002N01.7, putative, expressed -


Gene co-expression network
sample Sobic006G218900 Sobic006G218900 Sobic004G315700 Sobic004G315700 Sobic006G218900--Sobic004G315700 Sobic001G369800 Sobic001G369800 Sobic006G218900--Sobic001G369800 Sobic003G226700 Sobic003G226700 Sobic006G218900--Sobic003G226700 Sobic001G540700 Sobic001G540700 Sobic006G218900--Sobic001G540700 Sobic002G253900 Sobic002G253900 Sobic006G218900--Sobic002G253900 Sobic003G345000 Sobic003G345000 Sobic006G218900--Sobic003G345000 Sobic001G487200 Sobic001G487200 Sobic006G218900--Sobic001G487200 Sobic002G284100 Sobic002G284100 Sobic006G218900--Sobic002G284100 Sobic007G084200 Sobic007G084200 Sobic006G218900--Sobic007G084200 Sobic004G315700--Sobic001G487200 Sobic009G212100 Sobic009G212100 Sobic004G315700--Sobic009G212100 Sobic001G296800 Sobic001G296800 Sobic004G315700--Sobic001G296800 Sobic009G052100 Sobic009G052100 Sobic004G315700--Sobic009G052100 Sobic006G084300 Sobic006G084300 Sobic004G315700--Sobic006G084300 Sobic003G420300 Sobic003G420300 Sobic004G315700--Sobic003G420300 Sobic004G315700--Sobic006G218900 Sobic004G315700--Sobic003G345000 Sobic004G315700--Sobic001G540700 Sobic001G369800--Sobic002G284100 Sobic001G369800--Sobic001G487200 Sobic001G123100 Sobic001G123100 Sobic001G369800--Sobic001G123100 Sobic001G369800--Sobic001G540700 Sobic001G369800--Sobic006G218900 Sobic001G369800--Sobic009G212100 Sobic003G283600 Sobic003G283600 Sobic001G369800--Sobic003G283600 Sobic003G351900 Sobic003G351900 Sobic001G369800--Sobic003G351900 Sobic001G212600 Sobic001G212600 Sobic001G369800--Sobic001G212600 Sobic003G226700--Sobic007G084200 Sobic003G226700--Sobic003G420300 Sobic003G292700 Sobic003G292700 Sobic003G226700--Sobic003G292700 Sobic001G425700 Sobic001G425700 Sobic003G226700--Sobic001G425700 Sobic003G289800 Sobic003G289800 Sobic003G226700--Sobic003G289800 Sobic003G226700--Sobic009G212100 Sobic003G226700--Sobic001G487200 Sobic003G226700--Sobic004G315700 Sobic003G024000 Sobic003G024000 Sobic003G226700--Sobic003G024000 Sobic001G540700--Sobic002G284100 Sobic007G197100 Sobic007G197100 Sobic001G540700--Sobic007G197100 Sobic004G207000 Sobic004G207000 Sobic001G540700--Sobic004G207000 Sobic004G267600 Sobic004G267600 Sobic001G540700--Sobic004G267600 Sobic001G540700--Sobic004G315700 Sobic006G272800 Sobic006G272800 Sobic001G540700--Sobic006G272800 Sobic001G540700--Sobic001G487200 Sobic001G540700--Sobic001G369800 Sobic001G540700--Sobic003G345000 Sobic009G148000 Sobic009G148000 Sobic002G253900--Sobic009G148000 Sobic002G253900--Sobic001G123100 Sobic006G200901 Sobic006G200901 Sobic002G253900--Sobic006G200901 Sobic002G343000 Sobic002G343000 Sobic002G253900--Sobic002G343000 Sobic001G005800 Sobic001G005800 Sobic002G253900--Sobic001G005800 Sobic002G253900--Sobic001G540700 Sobic002G253900--Sobic006G218900 Sobic002G253900--Sobic002G284100 Sobic002G006100 Sobic002G006100 Sobic002G253900--Sobic002G006100 Sobic003G345000--Sobic003G283600 Sobic003G345000--Sobic004G315700 Sobic003G345000--Sobic001G540700 Sobic003G345000--Sobic006G218900 Sobic003G345000--Sobic003G420300 Sobic003G345000--Sobic007G084200 Sobic009G225500 Sobic009G225500 Sobic003G345000--Sobic009G225500 Sobic003G345000--Sobic009G212100 Sobic003G345000--Sobic003G292700 Sobic001G487200--Sobic004G315700 Sobic001G487200--Sobic009G212100 Sobic001G487200--Sobic001G369800 Sobic001G231200 Sobic001G231200 Sobic001G487200--Sobic001G231200 Sobic002G370400 Sobic002G370400 Sobic001G487200--Sobic002G370400 Sobic001G487200--Sobic003G226700 Sobic001G487200--Sobic001G540700 Sobic001G487200--Sobic001G296800 Sobic001G487200--Sobic007G084200 Sobic002G284100--Sobic006G272800 Sobic002G284100--Sobic004G267600 Sobic002G027600 Sobic002G027600 Sobic002G284100--Sobic002G027600 Sobic002G284100--Sobic001G369800 Sobic002G284100--Sobic001G123100 Sobic002G284100--Sobic001G540700 Sobic010G086000 Sobic010G086000 Sobic002G284100--Sobic010G086000 Sobic009G172950 Sobic009G172950 Sobic002G284100--Sobic009G172950 Sobic006G142500 Sobic006G142500 Sobic002G284100--Sobic006G142500 Sobic007G084200--Sobic003G226700 Sobic007G084200--Sobic009G212100 Sobic007G084200--Sobic003G420300 Sobic007G084200--Sobic001G487200 Sobic007G084200--Sobic003G345000 Sobic007G084200--Sobic003G292700 Sobic007G084200--Sobic006G218900 Sobic007G084200--Sobic001G369800 Sobic007G084200--Sobic004G315700
Octagon: transcription factors


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