Gene annotation
Transcriptome id Sobic.001G212600.1
Synonym
Functional annotation a_IG002N01.7, putative, expressed
UniProt A0A1B6QK47
Pfam PF08241
Panther DB PTHR10108 PTHR10108:SF750
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT1G29790 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os10g42770.1 : a_IG002N01.7, putative, expressed
MaizeGDB (Corn) Zm00025a003557
Brachypodium KQJ97988
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G212600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G351900 fasciclin-like arabinogalactan protein, putative, expressed -
2 Sobic.003G411700 heat shock protein DnaJ, putative, expressed -
3 Sobic.008G165200 OsFBX358 - F-box domain containing protein, expressed -
4 Sobic.001G369800 monocopper oxidase, putative, expressed -
5 Sobic.001G296800 WD repeat-containing protein 8, putative, expressed -
6 Sobic.010G222800 expressed protein -
7 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
8 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein
9 Sobic.002G006100 phytosulfokine receptor precursor, putative, expressed -
10 Sobic.001G079900 expressed protein -
11 Sobic.006G272800 Most C2 domain protein(PubMedID : 29491869)@anthranilate phosphoribosyltransferase, putative, expressed -
12 Sobic.003G153900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
14 Sobic.009G212100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
15 Sobic.001G425200 expressed protein -
16 Sobic.002G027600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
17 Sobic.003G212600 ubiquitin-conjugating enzyme, putative, expressed K13960: UBE2T, ubiquitin-conjugating enzyme E2 T
18 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
19 Sobic.007G221700 expressed protein -
20 Sobic.006G218900 TKL_IRAK_CrRLK1L-1.9 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -


Gene co-expression network
sample Sobic001G212600 Sobic001G212600 Sobic003G351900 Sobic003G351900 Sobic001G212600--Sobic003G351900 Sobic003G411700 Sobic003G411700 Sobic001G212600--Sobic003G411700 Sobic008G165200 Sobic008G165200 Sobic001G212600--Sobic008G165200 Sobic001G369800 Sobic001G369800 Sobic001G212600--Sobic001G369800 Sobic001G296800 Sobic001G296800 Sobic001G212600--Sobic001G296800 Sobic010G222800 Sobic010G222800 Sobic001G212600--Sobic010G222800 Sobic001G487200 Sobic001G487200 Sobic001G212600--Sobic001G487200 Sobic005G062600 Sobic005G062600 Sobic001G212600--Sobic005G062600 Sobic002G006100 Sobic002G006100 Sobic001G212600--Sobic002G006100 Sobic006G142500 Sobic006G142500 Sobic003G351900--Sobic006G142500 Sobic001G079900 Sobic001G079900 Sobic003G351900--Sobic001G079900 Sobic003G351900--Sobic002G006100 Sobic002G027600 Sobic002G027600 Sobic003G351900--Sobic002G027600 Sobic003G153900 Sobic003G153900 Sobic003G351900--Sobic003G153900 Sobic003G351900--Sobic001G212600 Sobic005G032600 Sobic005G032600 Sobic003G351900--Sobic005G032600 Sobic004G164700 Sobic004G164700 Sobic003G351900--Sobic004G164700 Sobic001G395200 Sobic001G395200 Sobic003G351900--Sobic001G395200 Sobic003G411700--Sobic010G222800 Sobic004G306100 Sobic004G306100 Sobic003G411700--Sobic004G306100 Sobic002G271400 Sobic002G271400 Sobic003G411700--Sobic002G271400 Sobic010G103500 Sobic010G103500 Sobic003G411700--Sobic010G103500 Sobic001G425200 Sobic001G425200 Sobic003G411700--Sobic001G425200 Sobic003G343200 Sobic003G343200 Sobic003G411700--Sobic003G343200 Sobic003G411700--Sobic001G212600 Sobic010G024000 Sobic010G024000 Sobic003G411700--Sobic010G024000 Sobic005G160200 Sobic005G160200 Sobic003G411700--Sobic005G160200 Sobic008G165200--Sobic001G212600 Sobic007G031300 Sobic007G031300 Sobic008G165200--Sobic007G031300 Sobic010G020900 Sobic010G020900 Sobic008G165200--Sobic010G020900 Sobic008G169400 Sobic008G169400 Sobic008G165200--Sobic008G169400 Sobic008G165200--Sobic003G153900 Sobic008G165200--Sobic001G296800 Sobic009G024900 Sobic009G024900 Sobic008G165200--Sobic009G024900 Sobic008G165200--Sobic001G079900 Sobic008G165200--Sobic003G351900 Sobic002G284100 Sobic002G284100 Sobic001G369800--Sobic002G284100 Sobic001G369800--Sobic001G487200 Sobic001G123100 Sobic001G123100 Sobic001G369800--Sobic001G123100 Sobic001G540700 Sobic001G540700 Sobic001G369800--Sobic001G540700 Sobic006G218900 Sobic006G218900 Sobic001G369800--Sobic006G218900 Sobic009G212100 Sobic009G212100 Sobic001G369800--Sobic009G212100 Sobic003G283600 Sobic003G283600 Sobic001G369800--Sobic003G283600 Sobic001G369800--Sobic003G351900 Sobic001G369800--Sobic001G212600 Sobic001G296800--Sobic009G212100 Sobic004G315700 Sobic004G315700 Sobic001G296800--Sobic004G315700 Sobic001G296800--Sobic010G103500 Sobic001G296800--Sobic001G487200 Sobic004G129500 Sobic004G129500 Sobic001G296800--Sobic004G129500 Sobic001G361200 Sobic001G361200 Sobic001G296800--Sobic001G361200 Sobic002G370400 Sobic002G370400 Sobic001G296800--Sobic002G370400 Sobic001G296800--Sobic001G212600 Sobic009G052100 Sobic009G052100 Sobic001G296800--Sobic009G052100 Sobic010G222800--Sobic003G343200 Sobic010G222800--Sobic010G024000 Sobic010G222800--Sobic003G411700 Sobic002G112000 Sobic002G112000 Sobic010G222800--Sobic002G112000 Sobic008G070700 Sobic008G070700 Sobic010G222800--Sobic008G070700 Sobic010G222800--Sobic002G271400 Sobic007G076200 Sobic007G076200 Sobic010G222800--Sobic007G076200 Sobic003G423800 Sobic003G423800 Sobic010G222800--Sobic003G423800 Sobic008G131900 Sobic008G131900 Sobic010G222800--Sobic008G131900 Sobic001G487200--Sobic004G315700 Sobic001G487200--Sobic009G212100 Sobic001G487200--Sobic001G369800 Sobic001G231200 Sobic001G231200 Sobic001G487200--Sobic001G231200 Sobic001G487200--Sobic002G370400 Sobic003G226700 Sobic003G226700 Sobic001G487200--Sobic003G226700 Sobic001G487200--Sobic001G540700 Sobic001G487200--Sobic001G296800 Sobic007G084200 Sobic007G084200 Sobic001G487200--Sobic007G084200 Sobic004G267600 Sobic004G267600 Sobic005G062600--Sobic004G267600 Sobic010G092400 Sobic010G092400 Sobic005G062600--Sobic010G092400 Sobic007G121600 Sobic007G121600 Sobic005G062600--Sobic007G121600 Sobic005G062600--Sobic001G079900 Sobic010G129700 Sobic010G129700 Sobic005G062600--Sobic010G129700 Sobic007G161600 Sobic007G161600 Sobic005G062600--Sobic007G161600 Sobic001G493900 Sobic001G493900 Sobic005G062600--Sobic001G493900 Sobic005G062600--Sobic008G070700 Sobic003G019900 Sobic003G019900 Sobic005G062600--Sobic003G019900 Sobic002G006100--Sobic002G027600 Sobic003G259300 Sobic003G259300 Sobic002G006100--Sobic003G259300 Sobic006G272800 Sobic006G272800 Sobic002G006100--Sobic006G272800 Sobic002G006100--Sobic003G351900 Sobic001G425700 Sobic001G425700 Sobic002G006100--Sobic001G425700 Sobic003G298900 Sobic003G298900 Sobic002G006100--Sobic003G298900 Sobic002G006100--Sobic002G284100 Sobic004G078500 Sobic004G078500 Sobic002G006100--Sobic004G078500 Sobic009G225500 Sobic009G225500 Sobic002G006100--Sobic009G225500
Octagon: transcription factors


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