Gene annotation
Transcriptome id Sobic.001G369800.1
Synonym sks3, Sb01g035180
Functional annotation monocopper oxidase, putative, expressed
UniProt C5WZR5
Pfam PF07732 PF00394 PF07731
Panther DB PTHR11709:SF58 PTHR11709
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005507; copper ion binding GO:0016491oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT5G48450 : SKU5 similar 3
RAP-DB (Rice) LOC_Os01g01030.1 : monocopper oxidase, putative, expressed
MaizeGDB (Corn) Zm00025a006379 , Zm00025a002498
Brachypodium KQK02800
Barley HORVU3Hr1G015510.6 , HORVU3Hr1G015510.5 , HORVU3Hr1G015510.4 , HORVU3Hr1G015510.7 , HORVU3Hr1G015510.1 , HORVU3Hr1G015510.3 , HORVU3Hr1G015510.2 , HORVU1Hr1G046690.10 , HORVU1Hr1G046690.8 , HORVU1Hr1G046690.9 , HORVU1Hr1G046690.4 , HORVU1Hr1G046690.5 , HORVU1Hr1G046690.6 , HORVU1Hr1G046690.7 , HORVU1Hr1G046690.1 , HORVU1Hr1G046690.3
Wheat TraesCS3B02G101200 , TraesCS1A02G176000 , TraesCS3B02G101500 , TraesCS1B02G204100 , TraesCS3D02G086400 , TraesCS1D02G162800 , TraesCS3A02G085900 , TraesCS3A02G085900 , TraesCS3A02G085900
Populus PNT54082 , PNT54081 , PNT54080 , PNT44989


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cDNA sequences
Sobic.001G369800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
2 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
3 Sobic.001G123100 Os3bglu8 - beta-glucosidase, exo-beta-glucansase, high similarity to Os3bglu7, expressed K05350: beta-glucosidase
4 Sobic.001G540700 expressed protein -
5 Sobic.006G218900 TKL_IRAK_CrRLK1L-1.9 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
6 Sobic.009G212100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
7 Sobic.003G283600 HVA22, putative, expressed -
8 Sobic.003G351900 fasciclin-like arabinogalactan protein, putative, expressed -
9 Sobic.001G212600 a_IG002N01.7, putative, expressed -
10 Sobic.002G253900 growth regulator related protein, putative, expressed -
11 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
12 Sobic.010G079100 lysM domain-containing GPI-anchored protein 1 precursor, putative, expressed -
13 Sobic.004G145300 OsFBD12 - F-box and FBD domain containing protein, expressed -
14 Sobic.007G084200 expressed protein -
15 Sobic.003G226700 kinesin motor domain containing protein, putative, expressed K10393: KIF2_24, kinesin family member 2/24
16 Sobic.003G153900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.001G051300 BEE 1, putative, expressed -
18 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
19 Sobic.009G172950 - K02541: DNA replication licensing factor MCM3
20 Sobic.002G006100 phytosulfokine receptor precursor, putative, expressed -


Gene co-expression network
sample Sobic001G369800 Sobic001G369800 Sobic002G284100 Sobic002G284100 Sobic001G369800--Sobic002G284100 Sobic001G487200 Sobic001G487200 Sobic001G369800--Sobic001G487200 Sobic001G123100 Sobic001G123100 Sobic001G369800--Sobic001G123100 Sobic001G540700 Sobic001G540700 Sobic001G369800--Sobic001G540700 Sobic006G218900 Sobic006G218900 Sobic001G369800--Sobic006G218900 Sobic009G212100 Sobic009G212100 Sobic001G369800--Sobic009G212100 Sobic003G283600 Sobic003G283600 Sobic001G369800--Sobic003G283600 Sobic003G351900 Sobic003G351900 Sobic001G369800--Sobic003G351900 Sobic001G212600 Sobic001G212600 Sobic001G369800--Sobic001G212600 Sobic006G272800 Sobic006G272800 Sobic002G284100--Sobic006G272800 Sobic004G267600 Sobic004G267600 Sobic002G284100--Sobic004G267600 Sobic002G027600 Sobic002G027600 Sobic002G284100--Sobic002G027600 Sobic002G284100--Sobic001G369800 Sobic002G284100--Sobic001G123100 Sobic002G284100--Sobic001G540700 Sobic010G086000 Sobic010G086000 Sobic002G284100--Sobic010G086000 Sobic009G172950 Sobic009G172950 Sobic002G284100--Sobic009G172950 Sobic006G142500 Sobic006G142500 Sobic002G284100--Sobic006G142500 Sobic004G315700 Sobic004G315700 Sobic001G487200--Sobic004G315700 Sobic001G487200--Sobic009G212100 Sobic001G487200--Sobic001G369800 Sobic001G231200 Sobic001G231200 Sobic001G487200--Sobic001G231200 Sobic002G370400 Sobic002G370400 Sobic001G487200--Sobic002G370400 Sobic003G226700 Sobic003G226700 Sobic001G487200--Sobic003G226700 Sobic001G487200--Sobic001G540700 Sobic001G296800 Sobic001G296800 Sobic001G487200--Sobic001G296800 Sobic007G084200 Sobic007G084200 Sobic001G487200--Sobic007G084200 Sobic001G123100--Sobic002G284100 Sobic002G253900 Sobic002G253900 Sobic001G123100--Sobic002G253900 Sobic001G123100--Sobic001G369800 Sobic005G143100 Sobic005G143100 Sobic001G123100--Sobic005G143100 Sobic004G145300 Sobic004G145300 Sobic001G123100--Sobic004G145300 Sobic001G123300 Sobic001G123300 Sobic001G123100--Sobic001G123300 Sobic001G123100--Sobic001G540700 Sobic002G006100 Sobic002G006100 Sobic001G123100--Sobic002G006100 Sobic003G224700 Sobic003G224700 Sobic001G123100--Sobic003G224700 Sobic001G540700--Sobic002G284100 Sobic007G197100 Sobic007G197100 Sobic001G540700--Sobic007G197100 Sobic004G207000 Sobic004G207000 Sobic001G540700--Sobic004G207000 Sobic001G540700--Sobic004G267600 Sobic001G540700--Sobic004G315700 Sobic001G540700--Sobic006G272800 Sobic001G540700--Sobic001G487200 Sobic001G540700--Sobic001G369800 Sobic003G345000 Sobic003G345000 Sobic001G540700--Sobic003G345000 Sobic006G218900--Sobic004G315700 Sobic006G218900--Sobic001G369800 Sobic006G218900--Sobic003G226700 Sobic006G218900--Sobic001G540700 Sobic006G218900--Sobic002G253900 Sobic006G218900--Sobic003G345000 Sobic006G218900--Sobic001G487200 Sobic006G218900--Sobic002G284100 Sobic006G218900--Sobic007G084200 Sobic009G212100--Sobic001G487200 Sobic009G212100--Sobic004G315700 Sobic009G212100--Sobic001G296800 Sobic009G212100--Sobic003G226700 Sobic009G212100--Sobic007G084200 Sobic006G267500 Sobic006G267500 Sobic009G212100--Sobic006G267500 Sobic006G084300 Sobic006G084300 Sobic009G212100--Sobic006G084300 Sobic009G212100--Sobic001G369800 Sobic006G254500 Sobic006G254500 Sobic009G212100--Sobic006G254500 Sobic001G290500 Sobic001G290500 Sobic003G283600--Sobic001G290500 Sobic003G283600--Sobic003G345000 Sobic001G468500 Sobic001G468500 Sobic003G283600--Sobic001G468500 Sobic010G003300 Sobic010G003300 Sobic003G283600--Sobic010G003300 Sobic003G283600--Sobic006G142500 Sobic001G296100 Sobic001G296100 Sobic003G283600--Sobic001G296100 Sobic003G283600--Sobic001G369800 Sobic003G283600--Sobic001G540700 Sobic003G283600--Sobic010G086000 Sobic003G351900--Sobic006G142500 Sobic001G079900 Sobic001G079900 Sobic003G351900--Sobic001G079900 Sobic003G351900--Sobic002G006100 Sobic003G351900--Sobic002G027600 Sobic003G153900 Sobic003G153900 Sobic003G351900--Sobic003G153900 Sobic003G351900--Sobic001G212600 Sobic005G032600 Sobic005G032600 Sobic003G351900--Sobic005G032600 Sobic004G164700 Sobic004G164700 Sobic003G351900--Sobic004G164700 Sobic001G395200 Sobic001G395200 Sobic003G351900--Sobic001G395200 Sobic001G212600--Sobic003G351900 Sobic003G411700 Sobic003G411700 Sobic001G212600--Sobic003G411700 Sobic008G165200 Sobic008G165200 Sobic001G212600--Sobic008G165200 Sobic001G212600--Sobic001G369800 Sobic001G212600--Sobic001G296800 Sobic010G222800 Sobic010G222800 Sobic001G212600--Sobic010G222800 Sobic001G212600--Sobic001G487200 Sobic005G062600 Sobic005G062600 Sobic001G212600--Sobic005G062600 Sobic001G212600--Sobic002G006100
Octagon: transcription factors


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