Gene annotation
Transcriptome id Sobic.002G006100.1
Synonym AtPSKR2, Sb02g000750, PSKR2
Functional annotation phytosulfokine receptor precursor, putative, expressed
UniProt C5X772
Pfam PF08263 PF00560 PF00069 PF13855
Panther DB PTHR27000 PTHR27000:SF24
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G53890 : phytosylfokine-alpha receptor 2
RAP-DB (Rice) LOC_Os07g01710.1 : phytosulfokine receptor precursor, putative, expressed
MaizeGDB (Corn) Zm00025a044866
Brachypodium -
Barley HORVU5Hr1G119520.1 , HORVU5Hr1G119520.4
Wheat TraesCS7B02G000700 , TraesCS7B02G000600
Populus -


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cDNA sequences
Sobic.002G006100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G027600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
2 Sobic.003G259300 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
3 Sobic.006G272800 Most C2 domain protein(PubMedID : 29491869)@anthranilate phosphoribosyltransferase, putative, expressed -
4 Sobic.003G351900 fasciclin-like arabinogalactan protein, putative, expressed -
5 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
6 Sobic.003G298900 1,3-beta-glucan synthase component, putative, expressed K11000: callose synthase
7 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
8 Sobic.004G078500 Leucine Rich Repeat family protein, expressed -
9 Sobic.009G225500 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
10 Sobic.001G540700 expressed protein -
11 Sobic.002G253900 growth regulator related protein, putative, expressed -
12 Sobic.001G123100 Os3bglu8 - beta-glucosidase, exo-beta-glucansase, high similarity to Os3bglu7, expressed K05350: beta-glucosidase
13 Sobic.005G032600 glucan endo-1,3-beta-glucosidase-related, putative, expressed -
14 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
15 Sobic.005G018050 - -
16 Sobic.009G127800 BZIP protein, putative, expressed -
17 Sobic.006G142500 protein kinase, putative, expressed -
18 Sobic.005G143100 expressed protein -
19 Sobic.001G212600 a_IG002N01.7, putative, expressed -
20 Sobic.006G218900 TKL_IRAK_CrRLK1L-1.9 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -


Gene co-expression network
sample Sobic002G006100 Sobic002G006100 Sobic002G027600 Sobic002G027600 Sobic002G006100--Sobic002G027600 Sobic003G259300 Sobic003G259300 Sobic002G006100--Sobic003G259300 Sobic006G272800 Sobic006G272800 Sobic002G006100--Sobic006G272800 Sobic003G351900 Sobic003G351900 Sobic002G006100--Sobic003G351900 Sobic001G425700 Sobic001G425700 Sobic002G006100--Sobic001G425700 Sobic003G298900 Sobic003G298900 Sobic002G006100--Sobic003G298900 Sobic002G284100 Sobic002G284100 Sobic002G006100--Sobic002G284100 Sobic004G078500 Sobic004G078500 Sobic002G006100--Sobic004G078500 Sobic009G225500 Sobic009G225500 Sobic002G006100--Sobic009G225500 Sobic002G027600--Sobic002G006100 Sobic002G027600--Sobic006G272800 Sobic004G267600 Sobic004G267600 Sobic002G027600--Sobic004G267600 Sobic005G032600 Sobic005G032600 Sobic002G027600--Sobic005G032600 Sobic002G027600--Sobic002G284100 Sobic006G142500 Sobic006G142500 Sobic002G027600--Sobic006G142500 Sobic009G127800 Sobic009G127800 Sobic002G027600--Sobic009G127800 Sobic002G027600--Sobic003G351900 Sobic001G079900 Sobic001G079900 Sobic002G027600--Sobic001G079900 Sobic003G259300--Sobic001G425700 Sobic003G259300--Sobic009G225500 Sobic003G259300--Sobic002G006100 Sobic003G259300--Sobic009G127800 Sobic003G259300--Sobic006G272800 Sobic005G153000 Sobic005G153000 Sobic003G259300--Sobic005G153000 Sobic001G054700 Sobic001G054700 Sobic003G259300--Sobic001G054700 Sobic004G234500 Sobic004G234500 Sobic003G259300--Sobic004G234500 Sobic003G226700 Sobic003G226700 Sobic003G259300--Sobic003G226700 Sobic006G272800--Sobic002G284100 Sobic006G272800--Sobic002G027600 Sobic006G272800--Sobic004G267600 Sobic008G070700 Sobic008G070700 Sobic006G272800--Sobic008G070700 Sobic006G272800--Sobic005G032600 Sobic001G468000 Sobic001G468000 Sobic006G272800--Sobic001G468000 Sobic006G272800--Sobic002G006100 Sobic006G272800--Sobic006G142500 Sobic001G158300 Sobic001G158300 Sobic006G272800--Sobic001G158300 Sobic003G351900--Sobic006G142500 Sobic003G351900--Sobic001G079900 Sobic003G351900--Sobic002G006100 Sobic003G351900--Sobic002G027600 Sobic003G153900 Sobic003G153900 Sobic003G351900--Sobic003G153900 Sobic001G212600 Sobic001G212600 Sobic003G351900--Sobic001G212600 Sobic003G351900--Sobic005G032600 Sobic004G164700 Sobic004G164700 Sobic003G351900--Sobic004G164700 Sobic001G395200 Sobic001G395200 Sobic003G351900--Sobic001G395200 Sobic001G425700--Sobic003G259300 Sobic001G425700--Sobic003G226700 Sobic001G425700--Sobic002G006100 Sobic003G024000 Sobic003G024000 Sobic001G425700--Sobic003G024000 Sobic003G104100 Sobic003G104100 Sobic001G425700--Sobic003G104100 Sobic001G425700--Sobic004G164700 Sobic001G425700--Sobic009G225500 Sobic006G281900 Sobic006G281900 Sobic001G425700--Sobic006G281900 Sobic001G425700--Sobic009G127800 Sobic003G298900--Sobic002G006100 Sobic001G540700 Sobic001G540700 Sobic003G298900--Sobic001G540700 Sobic001G123100 Sobic001G123100 Sobic003G298900--Sobic001G123100 Sobic009G254000 Sobic009G254000 Sobic003G298900--Sobic009G254000 Sobic009G005700 Sobic009G005700 Sobic003G298900--Sobic009G005700 Sobic005G064100 Sobic005G064100 Sobic003G298900--Sobic005G064100 Sobic002G253900 Sobic002G253900 Sobic003G298900--Sobic002G253900 Sobic003G411700 Sobic003G411700 Sobic003G298900--Sobic003G411700 Sobic007G197100 Sobic007G197100 Sobic003G298900--Sobic007G197100 Sobic002G284100--Sobic006G272800 Sobic002G284100--Sobic004G267600 Sobic002G284100--Sobic002G027600 Sobic001G369800 Sobic001G369800 Sobic002G284100--Sobic001G369800 Sobic002G284100--Sobic001G123100 Sobic002G284100--Sobic001G540700 Sobic010G086000 Sobic010G086000 Sobic002G284100--Sobic010G086000 Sobic009G172950 Sobic009G172950 Sobic002G284100--Sobic009G172950 Sobic002G284100--Sobic006G142500 Sobic002G335500 Sobic002G335500 Sobic004G078500--Sobic002G335500 Sobic004G078500--Sobic002G006100 Sobic009G002200 Sobic009G002200 Sobic004G078500--Sobic009G002200 Sobic002G112000 Sobic002G112000 Sobic004G078500--Sobic002G112000 Sobic005G018050 Sobic005G018050 Sobic004G078500--Sobic005G018050 Sobic001G081800 Sobic001G081800 Sobic004G078500--Sobic001G081800 Sobic004G078500--Sobic003G259300 Sobic003G290400 Sobic003G290400 Sobic004G078500--Sobic003G290400 Sobic001G465500 Sobic001G465500 Sobic004G078500--Sobic001G465500 Sobic009G225500--Sobic009G127800 Sobic009G225500--Sobic003G259300 Sobic009G225500--Sobic006G142500 Sobic006G221300 Sobic006G221300 Sobic009G225500--Sobic006G221300 Sobic009G225500--Sobic010G086000 Sobic009G225500--Sobic001G425700 Sobic004G179800 Sobic004G179800 Sobic009G225500--Sobic004G179800 Sobic009G225500--Sobic006G272800 Sobic009G225500--Sobic006G281900
Octagon: transcription factors


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