Gene annotation
Transcriptome id Sobic.005G143100.1
Synonym AXR4, RGR, RGR1
Functional annotation expressed protein
UniProt A0A1B6PSG4
Pfam -
Panther DB PTHR10992 PTHR10992:SF773
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G54990 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os11g34140.1 : expressed protein
MaizeGDB (Corn) Zm00025a033542
Brachypodium KQJ88297
Barley HORVU5Hr1G063470.1 , HORVU5Hr1G063470.2
Wheat TraesCS5D02G226200 , TraesCS5A02G218100 , TraesCS5B02G217300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
2 Sobic.009G172950 - K02541: DNA replication licensing factor MCM3
3 Sobic.001G123100 Os3bglu8 - beta-glucosidase, exo-beta-glucansase, high similarity to Os3bglu7, expressed K05350: beta-glucosidase
4 Sobic.004G321400 BRUSHY 1, putative, expressed -
5 Sobic.002G006100 phytosulfokine receptor precursor, putative, expressed -
6 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
7 Sobic.003G289800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
8 Sobic.003G226700 kinesin motor domain containing protein, putative, expressed K10393: KIF2_24, kinesin family member 2/24
9 Sobic.006G142500 protein kinase, putative, expressed -
10 Sobic.010G086000 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
11 Sobic.001G452900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
12 Sobic.002G317700 BNR/Asp-box repeat family protein, putative, expressed -
13 Sobic.003G100700 serine/threonine-protein kinase, putative, expressed -
14 Sobic.006G272800 Most C2 domain protein(PubMedID : 29491869)@anthranilate phosphoribosyltransferase, putative, expressed -
15 Sobic.005G157300 protein binding protein, putative, expressed -
16 Sobic.002G027600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
17 Sobic.009G087000 MCM6 - Putative minichromosome maintenance MCM complex subunit 6, expressed K02542: DNA replication licensing factor MCM6
18 Sobic.003G055600 expressed protein -
19 Sobic.003G204200 AP2/B3 transcription factor(PubMedID : 27016024)@B3 DNA binding domain containing protein, expressed -
20 Sobic.002G253900 growth regulator related protein, putative, expressed -


Gene co-expression network
sample Sobic005G143100 Sobic005G143100 Sobic002G284100 Sobic002G284100 Sobic005G143100--Sobic002G284100 Sobic009G172950 Sobic009G172950 Sobic005G143100--Sobic009G172950 Sobic001G123100 Sobic001G123100 Sobic005G143100--Sobic001G123100 Sobic004G321400 Sobic004G321400 Sobic005G143100--Sobic004G321400 Sobic002G006100 Sobic002G006100 Sobic005G143100--Sobic002G006100 Sobic004G267600 Sobic004G267600 Sobic005G143100--Sobic004G267600 Sobic003G289800 Sobic003G289800 Sobic005G143100--Sobic003G289800 Sobic003G226700 Sobic003G226700 Sobic005G143100--Sobic003G226700 Sobic006G142500 Sobic006G142500 Sobic005G143100--Sobic006G142500 Sobic006G272800 Sobic006G272800 Sobic002G284100--Sobic006G272800 Sobic002G284100--Sobic004G267600 Sobic002G027600 Sobic002G027600 Sobic002G284100--Sobic002G027600 Sobic001G369800 Sobic001G369800 Sobic002G284100--Sobic001G369800 Sobic002G284100--Sobic001G123100 Sobic001G540700 Sobic001G540700 Sobic002G284100--Sobic001G540700 Sobic010G086000 Sobic010G086000 Sobic002G284100--Sobic010G086000 Sobic002G284100--Sobic009G172950 Sobic002G284100--Sobic006G142500 Sobic003G183700 Sobic003G183700 Sobic009G172950--Sobic003G183700 Sobic009G087000 Sobic009G087000 Sobic009G172950--Sobic009G087000 Sobic003G032200 Sobic003G032200 Sobic009G172950--Sobic003G032200 Sobic003G444300 Sobic003G444300 Sobic009G172950--Sobic003G444300 Sobic001G083300 Sobic001G083300 Sobic009G172950--Sobic001G083300 Sobic009G184200 Sobic009G184200 Sobic009G172950--Sobic009G184200 Sobic009G172950--Sobic004G321400 Sobic001G105800 Sobic001G105800 Sobic009G172950--Sobic001G105800 Sobic001G146900 Sobic001G146900 Sobic009G172950--Sobic001G146900 Sobic001G123100--Sobic002G284100 Sobic002G253900 Sobic002G253900 Sobic001G123100--Sobic002G253900 Sobic001G123100--Sobic001G369800 Sobic001G123100--Sobic005G143100 Sobic004G145300 Sobic004G145300 Sobic001G123100--Sobic004G145300 Sobic001G123300 Sobic001G123300 Sobic001G123100--Sobic001G123300 Sobic001G123100--Sobic001G540700 Sobic001G123100--Sobic002G006100 Sobic003G224700 Sobic003G224700 Sobic001G123100--Sobic003G224700 Sobic004G321400--Sobic003G183700 Sobic004G321400--Sobic009G087000 Sobic005G110535 Sobic005G110535 Sobic004G321400--Sobic005G110535 Sobic002G290000 Sobic002G290000 Sobic004G321400--Sobic002G290000 Sobic003G369200 Sobic003G369200 Sobic004G321400--Sobic003G369200 Sobic008G129200 Sobic008G129200 Sobic004G321400--Sobic008G129200 Sobic004G095200 Sobic004G095200 Sobic004G321400--Sobic004G095200 Sobic004G321400--Sobic009G172950 Sobic004G331600 Sobic004G331600 Sobic004G321400--Sobic004G331600 Sobic002G006100--Sobic002G027600 Sobic003G259300 Sobic003G259300 Sobic002G006100--Sobic003G259300 Sobic002G006100--Sobic006G272800 Sobic003G351900 Sobic003G351900 Sobic002G006100--Sobic003G351900 Sobic001G425700 Sobic001G425700 Sobic002G006100--Sobic001G425700 Sobic003G298900 Sobic003G298900 Sobic002G006100--Sobic003G298900 Sobic002G006100--Sobic002G284100 Sobic004G078500 Sobic004G078500 Sobic002G006100--Sobic004G078500 Sobic009G225500 Sobic009G225500 Sobic002G006100--Sobic009G225500 Sobic001G493900 Sobic001G493900 Sobic004G267600--Sobic001G493900 Sobic004G267600--Sobic002G284100 Sobic010G129700 Sobic010G129700 Sobic004G267600--Sobic010G129700 Sobic004G267600--Sobic006G142500 Sobic004G267600--Sobic002G027600 Sobic004G267600--Sobic006G272800 Sobic002G417000 Sobic002G417000 Sobic004G267600--Sobic002G417000 Sobic005G032600 Sobic005G032600 Sobic004G267600--Sobic005G032600 Sobic005G062600 Sobic005G062600 Sobic004G267600--Sobic005G062600 Sobic002G383100 Sobic002G383100 Sobic003G289800--Sobic002G383100 Sobic003G289800--Sobic009G087000 Sobic001G051300 Sobic001G051300 Sobic003G289800--Sobic001G051300 Sobic003G289800--Sobic003G183700 Sobic003G420300 Sobic003G420300 Sobic003G289800--Sobic003G420300 Sobic003G179500 Sobic003G179500 Sobic003G289800--Sobic003G179500 Sobic003G289800--Sobic005G110535 Sobic003G389100 Sobic003G389100 Sobic003G289800--Sobic003G389100 Sobic010G147700 Sobic010G147700 Sobic003G289800--Sobic010G147700 Sobic007G084200 Sobic007G084200 Sobic003G226700--Sobic007G084200 Sobic003G226700--Sobic003G420300 Sobic003G292700 Sobic003G292700 Sobic003G226700--Sobic003G292700 Sobic003G226700--Sobic001G425700 Sobic003G226700--Sobic003G289800 Sobic009G212100 Sobic009G212100 Sobic003G226700--Sobic009G212100 Sobic001G487200 Sobic001G487200 Sobic003G226700--Sobic001G487200 Sobic004G315700 Sobic004G315700 Sobic003G226700--Sobic004G315700 Sobic003G024000 Sobic003G024000 Sobic003G226700--Sobic003G024000 Sobic006G142500--Sobic010G086000 Sobic006G142500--Sobic004G267600 Sobic010G192500 Sobic010G192500 Sobic006G142500--Sobic010G192500 Sobic006G142500--Sobic009G225500 Sobic006G142500--Sobic003G032200 Sobic004G234500 Sobic004G234500 Sobic006G142500--Sobic004G234500 Sobic009G127800 Sobic009G127800 Sobic006G142500--Sobic009G127800 Sobic009G047000 Sobic009G047000 Sobic006G142500--Sobic009G047000 Sobic001G390400 Sobic001G390400 Sobic006G142500--Sobic001G390400
Octagon: transcription factors


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