Gene annotation
Transcriptome id Sobic.001G452900.1
Synonym Sb01g042560
Functional annotation glucan endo-1,3-beta-glucosidase precursor, putative, expressed
UniProt C5WSP4
Pfam PF07983 PF00332
Panther DB PTHR32227 PTHR32227:SF52
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT2G01630 : O-Glycosyl hydrolases family 17 protein
RAP-DB (Rice) LOC_Os03g12140.1 : glucan endo-1,3-beta-glucosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a048187 , Zm00025a053038 , Zm00025a001342
Brachypodium KQK22839
Barley HORVU4Hr1G067180.8 , HORVU4Hr1G067180.1 , HORVU4Hr1G067180.2 , HORVU4Hr1G067180.3 , HORVU4Hr1G067180.4 , HORVU4Hr1G067180.5 , HORVU4Hr1G067180.7 , HORVU4Hr1G067180.6 , HORVU2Hr1G044460.4 , HORVU2Hr1G044460.2 , HORVU2Hr1G044460.3 , HORVU2Hr1G044460.1
Wheat TraesCS4A02G064900 , TraesCS4A02G064900 , TraesCS2D02G221800 , TraesCS4B02G242300 , TraesCS4D02G241900 , TraesCS4D02G241900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G086000 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
2 Sobic.010G241100 thaumatin family domain containing protein, expressed -
3 Sobic.004G108400 heavy-metal-associated domain-containing protein, putative, expressed -
4 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -
5 Sobic.006G142500 protein kinase, putative, expressed -
6 Sobic.003G032200 IQ calmodulin-binding motif domain containing protein, expressed -
7 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
8 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
9 Sobic.009G172950 - K02541: DNA replication licensing factor MCM3
10 Sobic.002G337600 expressed protein -
11 Sobic.002G027600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
12 Sobic.001G398400 expressed protein -
13 Sobic.003G320300 ZOS1-12 - C2H2 zinc finger protein, expressed -
14 Sobic.001G540900 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
15 Sobic.002G335900 cyclin, putative, expressed K18812: cyclin D6, plant
16 Sobic.008G114900 rhoGAP domain containing protein, expressed -
17 Sobic.006G124400 ATP binding protein, putative, expressed -
18 Sobic.005G157300 protein binding protein, putative, expressed -
19 Sobic.001G083500 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.008G006800 inactive receptor kinase At2g26730 precursor, putative, expressed -


Gene co-expression network
sample Sobic001G452900 Sobic001G452900 Sobic010G086000 Sobic010G086000 Sobic001G452900--Sobic010G086000 Sobic010G241100 Sobic010G241100 Sobic001G452900--Sobic010G241100 Sobic004G108400 Sobic004G108400 Sobic001G452900--Sobic004G108400 Sobic010G192500 Sobic010G192500 Sobic001G452900--Sobic010G192500 Sobic006G142500 Sobic006G142500 Sobic001G452900--Sobic006G142500 Sobic003G032200 Sobic003G032200 Sobic001G452900--Sobic003G032200 Sobic002G284100 Sobic002G284100 Sobic001G452900--Sobic002G284100 Sobic004G267600 Sobic004G267600 Sobic001G452900--Sobic004G267600 Sobic009G172950 Sobic009G172950 Sobic001G452900--Sobic009G172950 Sobic010G086000--Sobic006G142500 Sobic010G086000--Sobic003G032200 Sobic010G086000--Sobic010G241100 Sobic010G086000--Sobic001G452900 Sobic010G086000--Sobic010G192500 Sobic004G234500 Sobic004G234500 Sobic010G086000--Sobic004G234500 Sobic010G086000--Sobic004G267600 Sobic010G086000--Sobic002G284100 Sobic001G054700 Sobic001G054700 Sobic010G086000--Sobic001G054700 Sobic010G241100--Sobic010G192500 Sobic010G241100--Sobic010G086000 Sobic010G241100--Sobic003G032200 Sobic002G337600 Sobic002G337600 Sobic010G241100--Sobic002G337600 Sobic002G394500 Sobic002G394500 Sobic010G241100--Sobic002G394500 Sobic002G222500 Sobic002G222500 Sobic010G241100--Sobic002G222500 Sobic010G023400 Sobic010G023400 Sobic010G241100--Sobic010G023400 Sobic010G241100--Sobic001G452900 Sobic007G160300 Sobic007G160300 Sobic010G241100--Sobic007G160300 Sobic004G108400--Sobic001G054700 Sobic006G221300 Sobic006G221300 Sobic004G108400--Sobic006G221300 Sobic009G143200 Sobic009G143200 Sobic004G108400--Sobic009G143200 Sobic004G108400--Sobic001G452900 Sobic007G008300 Sobic007G008300 Sobic004G108400--Sobic007G008300 Sobic009G127800 Sobic009G127800 Sobic004G108400--Sobic009G127800 Sobic007G162400 Sobic007G162400 Sobic004G108400--Sobic007G162400 Sobic002G050700 Sobic002G050700 Sobic004G108400--Sobic002G050700 Sobic009G101100 Sobic009G101100 Sobic004G108400--Sobic009G101100 Sobic009G060800 Sobic009G060800 Sobic010G192500--Sobic009G060800 Sobic003G089300 Sobic003G089300 Sobic010G192500--Sobic003G089300 Sobic010G192500--Sobic002G337600 Sobic003G366000 Sobic003G366000 Sobic010G192500--Sobic003G366000 Sobic010G192500--Sobic010G241100 Sobic001G155700 Sobic001G155700 Sobic010G192500--Sobic001G155700 Sobic001G493900 Sobic001G493900 Sobic010G192500--Sobic001G493900 Sobic002G319300 Sobic002G319300 Sobic010G192500--Sobic002G319300 Sobic009G208300 Sobic009G208300 Sobic010G192500--Sobic009G208300 Sobic006G142500--Sobic010G086000 Sobic006G142500--Sobic004G267600 Sobic006G142500--Sobic010G192500 Sobic009G225500 Sobic009G225500 Sobic006G142500--Sobic009G225500 Sobic006G142500--Sobic003G032200 Sobic006G142500--Sobic004G234500 Sobic006G142500--Sobic009G127800 Sobic009G047000 Sobic009G047000 Sobic006G142500--Sobic009G047000 Sobic001G390400 Sobic001G390400 Sobic006G142500--Sobic001G390400 Sobic009G184200 Sobic009G184200 Sobic003G032200--Sobic009G184200 Sobic003G032200--Sobic010G086000 Sobic010G105400 Sobic010G105400 Sobic003G032200--Sobic010G105400 Sobic003G032200--Sobic010G241100 Sobic003G032200--Sobic009G172950 Sobic003G032200--Sobic006G142500 Sobic002G296000 Sobic002G296000 Sobic003G032200--Sobic002G296000 Sobic003G444100 Sobic003G444100 Sobic003G032200--Sobic003G444100 Sobic002G204400 Sobic002G204400 Sobic003G032200--Sobic002G204400 Sobic006G272800 Sobic006G272800 Sobic002G284100--Sobic006G272800 Sobic002G284100--Sobic004G267600 Sobic002G027600 Sobic002G027600 Sobic002G284100--Sobic002G027600 Sobic001G369800 Sobic001G369800 Sobic002G284100--Sobic001G369800 Sobic001G123100 Sobic001G123100 Sobic002G284100--Sobic001G123100 Sobic001G540700 Sobic001G540700 Sobic002G284100--Sobic001G540700 Sobic002G284100--Sobic010G086000 Sobic002G284100--Sobic009G172950 Sobic002G284100--Sobic006G142500 Sobic004G267600--Sobic001G493900 Sobic004G267600--Sobic002G284100 Sobic010G129700 Sobic010G129700 Sobic004G267600--Sobic010G129700 Sobic004G267600--Sobic006G142500 Sobic004G267600--Sobic002G027600 Sobic004G267600--Sobic006G272800 Sobic002G417000 Sobic002G417000 Sobic004G267600--Sobic002G417000 Sobic005G032600 Sobic005G032600 Sobic004G267600--Sobic005G032600 Sobic005G062600 Sobic005G062600 Sobic004G267600--Sobic005G062600 Sobic003G183700 Sobic003G183700 Sobic009G172950--Sobic003G183700 Sobic009G087000 Sobic009G087000 Sobic009G172950--Sobic009G087000 Sobic009G172950--Sobic003G032200 Sobic003G444300 Sobic003G444300 Sobic009G172950--Sobic003G444300 Sobic001G083300 Sobic001G083300 Sobic009G172950--Sobic001G083300 Sobic009G172950--Sobic009G184200 Sobic004G321400 Sobic004G321400 Sobic009G172950--Sobic004G321400 Sobic001G105800 Sobic001G105800 Sobic009G172950--Sobic001G105800 Sobic001G146900 Sobic001G146900 Sobic009G172950--Sobic001G146900
Octagon: transcription factors


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