Gene annotation
Transcriptome id Sobic.010G086000.1
Synonym 1, Sb10g007450, CYCD4
Functional annotation cyclin, putative, expressed
UniProt A0A194YI25
Pfam PF02984 PF00134
Panther DB PTHR10177 PTHR10177:SF219
NCBI CDD KOG0656; G1/S-specific cyclin D
KEGG Orthology K18810; cyclin D1/2/4, plant
Gene Ontology GO:0005634; nucleus


Orthologs (automatic annotation)
TAIR AT5G65420 : CYCLIN D4;1
RAP-DB (Rice) LOC_Os06g11410.1 : cyclin, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G142500 protein kinase, putative, expressed -
2 Sobic.003G032200 IQ calmodulin-binding motif domain containing protein, expressed -
3 Sobic.010G241100 thaumatin family domain containing protein, expressed -
4 Sobic.001G452900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
5 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -
6 Sobic.004G234500 eukaryotic aspartyl protease domain containing protein, expressed -
7 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
8 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
9 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
10 Sobic.009G225500 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
11 Sobic.010G269700 expressed protein -
12 Sobic.009G172950 - K02541: DNA replication licensing factor MCM3
13 Sobic.004G164700 expressed protein -
14 Sobic.001G493900 beta-galactosidase, putative, expressed -
15 Sobic.006G272800 Most C2 domain protein(PubMedID : 29491869)@anthranilate phosphoribosyltransferase, putative, expressed -
16 Sobic.005G157300 protein binding protein, putative, expressed -
17 Sobic.006G050900 expressed protein -
18 Sobic.009G127800 BZIP protein, putative, expressed -
19 Sobic.004G108400 heavy-metal-associated domain-containing protein, putative, expressed -
20 Sobic.003G041900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -


Gene co-expression network
sample Sobic010G086000 Sobic010G086000 Sobic006G142500 Sobic006G142500 Sobic010G086000--Sobic006G142500 Sobic003G032200 Sobic003G032200 Sobic010G086000--Sobic003G032200 Sobic010G241100 Sobic010G241100 Sobic010G086000--Sobic010G241100 Sobic001G452900 Sobic001G452900 Sobic010G086000--Sobic001G452900 Sobic010G192500 Sobic010G192500 Sobic010G086000--Sobic010G192500 Sobic004G234500 Sobic004G234500 Sobic010G086000--Sobic004G234500 Sobic004G267600 Sobic004G267600 Sobic010G086000--Sobic004G267600 Sobic002G284100 Sobic002G284100 Sobic010G086000--Sobic002G284100 Sobic001G054700 Sobic001G054700 Sobic010G086000--Sobic001G054700 Sobic006G142500--Sobic010G086000 Sobic006G142500--Sobic004G267600 Sobic006G142500--Sobic010G192500 Sobic009G225500 Sobic009G225500 Sobic006G142500--Sobic009G225500 Sobic006G142500--Sobic003G032200 Sobic006G142500--Sobic004G234500 Sobic009G127800 Sobic009G127800 Sobic006G142500--Sobic009G127800 Sobic009G047000 Sobic009G047000 Sobic006G142500--Sobic009G047000 Sobic001G390400 Sobic001G390400 Sobic006G142500--Sobic001G390400 Sobic009G184200 Sobic009G184200 Sobic003G032200--Sobic009G184200 Sobic003G032200--Sobic010G086000 Sobic010G105400 Sobic010G105400 Sobic003G032200--Sobic010G105400 Sobic003G032200--Sobic010G241100 Sobic009G172950 Sobic009G172950 Sobic003G032200--Sobic009G172950 Sobic003G032200--Sobic006G142500 Sobic002G296000 Sobic002G296000 Sobic003G032200--Sobic002G296000 Sobic003G444100 Sobic003G444100 Sobic003G032200--Sobic003G444100 Sobic002G204400 Sobic002G204400 Sobic003G032200--Sobic002G204400 Sobic010G241100--Sobic010G192500 Sobic010G241100--Sobic010G086000 Sobic010G241100--Sobic003G032200 Sobic002G337600 Sobic002G337600 Sobic010G241100--Sobic002G337600 Sobic002G394500 Sobic002G394500 Sobic010G241100--Sobic002G394500 Sobic002G222500 Sobic002G222500 Sobic010G241100--Sobic002G222500 Sobic010G023400 Sobic010G023400 Sobic010G241100--Sobic010G023400 Sobic010G241100--Sobic001G452900 Sobic007G160300 Sobic007G160300 Sobic010G241100--Sobic007G160300 Sobic001G452900--Sobic010G086000 Sobic001G452900--Sobic010G241100 Sobic004G108400 Sobic004G108400 Sobic001G452900--Sobic004G108400 Sobic001G452900--Sobic010G192500 Sobic001G452900--Sobic006G142500 Sobic001G452900--Sobic003G032200 Sobic001G452900--Sobic002G284100 Sobic001G452900--Sobic004G267600 Sobic001G452900--Sobic009G172950 Sobic009G060800 Sobic009G060800 Sobic010G192500--Sobic009G060800 Sobic003G089300 Sobic003G089300 Sobic010G192500--Sobic003G089300 Sobic010G192500--Sobic002G337600 Sobic003G366000 Sobic003G366000 Sobic010G192500--Sobic003G366000 Sobic010G192500--Sobic010G241100 Sobic001G155700 Sobic001G155700 Sobic010G192500--Sobic001G155700 Sobic001G493900 Sobic001G493900 Sobic010G192500--Sobic001G493900 Sobic002G319300 Sobic002G319300 Sobic010G192500--Sobic002G319300 Sobic009G208300 Sobic009G208300 Sobic010G192500--Sobic009G208300 Sobic004G234500--Sobic010G023400 Sobic004G234500--Sobic006G142500 Sobic004G234500--Sobic010G086000 Sobic004G246500 Sobic004G246500 Sobic004G234500--Sobic004G246500 Sobic004G234500--Sobic004G267600 Sobic004G234500--Sobic009G127800 Sobic006G274200 Sobic006G274200 Sobic004G234500--Sobic006G274200 Sobic002G027600 Sobic002G027600 Sobic004G234500--Sobic002G027600 Sobic002G317700 Sobic002G317700 Sobic004G234500--Sobic002G317700 Sobic004G267600--Sobic001G493900 Sobic004G267600--Sobic002G284100 Sobic010G129700 Sobic010G129700 Sobic004G267600--Sobic010G129700 Sobic004G267600--Sobic006G142500 Sobic004G267600--Sobic002G027600 Sobic006G272800 Sobic006G272800 Sobic004G267600--Sobic006G272800 Sobic002G417000 Sobic002G417000 Sobic004G267600--Sobic002G417000 Sobic005G032600 Sobic005G032600 Sobic004G267600--Sobic005G032600 Sobic005G062600 Sobic005G062600 Sobic004G267600--Sobic005G062600 Sobic002G284100--Sobic006G272800 Sobic002G284100--Sobic004G267600 Sobic002G284100--Sobic002G027600 Sobic001G369800 Sobic001G369800 Sobic002G284100--Sobic001G369800 Sobic001G123100 Sobic001G123100 Sobic002G284100--Sobic001G123100 Sobic001G540700 Sobic001G540700 Sobic002G284100--Sobic001G540700 Sobic002G284100--Sobic010G086000 Sobic002G284100--Sobic009G172950 Sobic002G284100--Sobic006G142500 Sobic006G221300 Sobic006G221300 Sobic001G054700--Sobic006G221300 Sobic009G077300 Sobic009G077300 Sobic001G054700--Sobic009G077300 Sobic001G054700--Sobic004G108400 Sobic009G143200 Sobic009G143200 Sobic001G054700--Sobic009G143200 Sobic002G050700 Sobic002G050700 Sobic001G054700--Sobic002G050700 Sobic006G124400 Sobic006G124400 Sobic001G054700--Sobic006G124400 Sobic001G054700--Sobic009G127800 Sobic005G153000 Sobic005G153000 Sobic001G054700--Sobic005G153000 Sobic006G221800 Sobic006G221800 Sobic001G054700--Sobic006G221800
Octagon: transcription factors


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