Gene annotation
Transcriptome id Sobic.006G050900.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PKA3
Pfam PF02362
Panther DB PTHR31391 PTHR31391:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT4G33280 : AP2/B3-like transcriptional factor family protein
RAP-DB (Rice) LOC_Os04g31730.1 : expressed protein
MaizeGDB (Corn) Zm00025a055895
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G390400 expressed protein -
2 Sobic.008G190000 leucine-rich repeat family protein, putative, expressed -
3 Sobic.010G241100 thaumatin family domain containing protein, expressed -
4 Sobic.010G086000 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
5 Sobic.006G142500 protein kinase, putative, expressed -
6 Sobic.003G366000 DUF623 domain containing protein, expressed -
7 Sobic.002G206100 aspartic proteinase, putative, expressed -
8 Sobic.004G317200 "Upregulated to a greater extent than that of SbER1 in stem in response to drouht stress, not expredded in roots. SbER2 fusion protein localized on the cell membrane and chloroplast. Net photosynthetic rate and WUE, phenylpropanoid biosynthetic genes expression, and lignin content increased in overexpressing maize."(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
9 Sobic.010G023400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
10 Sobic.001G160000 LSTK-1-like kinase, putative, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
11 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -
12 Sobic.006G058000 OsSCP24 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
13 Sobic.003G032200 IQ calmodulin-binding motif domain containing protein, expressed -
14 Sobic.005G092700 expressed protein -
15 Sobic.003G041900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
16 Sobic.007G160300 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
17 Sobic.010G024500 expressed protein -
18 Sobic.004G234500 eukaryotic aspartyl protease domain containing protein, expressed -
19 Sobic.002G319300 IQ calmodulin-binding motif family protein, expressed K16743: ASPM, abnormal spindle-like microcephaly-associated protein
20 Sobic.006G110850 - -


Gene co-expression network
sample Sobic006G050900 Sobic006G050900 Sobic001G390400 Sobic001G390400 Sobic006G050900--Sobic001G390400 Sobic008G190000 Sobic008G190000 Sobic006G050900--Sobic008G190000 Sobic010G241100 Sobic010G241100 Sobic006G050900--Sobic010G241100 Sobic010G086000 Sobic010G086000 Sobic006G050900--Sobic010G086000 Sobic006G142500 Sobic006G142500 Sobic006G050900--Sobic006G142500 Sobic003G366000 Sobic003G366000 Sobic006G050900--Sobic003G366000 Sobic002G206100 Sobic002G206100 Sobic006G050900--Sobic002G206100 Sobic004G317200 Sobic004G317200 Sobic006G050900--Sobic004G317200 Sobic010G023400 Sobic010G023400 Sobic006G050900--Sobic010G023400 Sobic001G390400--Sobic003G366000 Sobic005G163400 Sobic005G163400 Sobic001G390400--Sobic005G163400 Sobic001G390400--Sobic006G050900 Sobic002G050700 Sobic002G050700 Sobic001G390400--Sobic002G050700 Sobic010G192500 Sobic010G192500 Sobic001G390400--Sobic010G192500 Sobic001G390400--Sobic004G317200 Sobic002G319300 Sobic002G319300 Sobic001G390400--Sobic002G319300 Sobic010G024500 Sobic010G024500 Sobic001G390400--Sobic010G024500 Sobic001G390400--Sobic006G142500 Sobic001G381100 Sobic001G381100 Sobic008G190000--Sobic001G381100 Sobic005G092700 Sobic005G092700 Sobic008G190000--Sobic005G092700 Sobic001G160000 Sobic001G160000 Sobic008G190000--Sobic001G160000 Sobic008G190000--Sobic010G024500 Sobic008G190000--Sobic003G366000 Sobic008G042200 Sobic008G042200 Sobic008G190000--Sobic008G042200 Sobic002G286700 Sobic002G286700 Sobic008G190000--Sobic002G286700 Sobic009G200000 Sobic009G200000 Sobic008G190000--Sobic009G200000 Sobic004G115700 Sobic004G115700 Sobic008G190000--Sobic004G115700 Sobic010G241100--Sobic010G192500 Sobic010G241100--Sobic010G086000 Sobic003G032200 Sobic003G032200 Sobic010G241100--Sobic003G032200 Sobic002G337600 Sobic002G337600 Sobic010G241100--Sobic002G337600 Sobic002G394500 Sobic002G394500 Sobic010G241100--Sobic002G394500 Sobic002G222500 Sobic002G222500 Sobic010G241100--Sobic002G222500 Sobic010G241100--Sobic010G023400 Sobic001G452900 Sobic001G452900 Sobic010G241100--Sobic001G452900 Sobic007G160300 Sobic007G160300 Sobic010G241100--Sobic007G160300 Sobic010G086000--Sobic006G142500 Sobic010G086000--Sobic003G032200 Sobic010G086000--Sobic010G241100 Sobic010G086000--Sobic001G452900 Sobic010G086000--Sobic010G192500 Sobic004G234500 Sobic004G234500 Sobic010G086000--Sobic004G234500 Sobic004G267600 Sobic004G267600 Sobic010G086000--Sobic004G267600 Sobic002G284100 Sobic002G284100 Sobic010G086000--Sobic002G284100 Sobic001G054700 Sobic001G054700 Sobic010G086000--Sobic001G054700 Sobic006G142500--Sobic010G086000 Sobic006G142500--Sobic004G267600 Sobic006G142500--Sobic010G192500 Sobic009G225500 Sobic009G225500 Sobic006G142500--Sobic009G225500 Sobic006G142500--Sobic003G032200 Sobic006G142500--Sobic004G234500 Sobic009G127800 Sobic009G127800 Sobic006G142500--Sobic009G127800 Sobic009G047000 Sobic009G047000 Sobic006G142500--Sobic009G047000 Sobic006G142500--Sobic001G390400 Sobic006G110850 Sobic006G110850 Sobic003G366000--Sobic006G110850 Sobic006G187000 Sobic006G187000 Sobic003G366000--Sobic006G187000 Sobic009G060800 Sobic009G060800 Sobic003G366000--Sobic009G060800 Sobic004G302700 Sobic004G302700 Sobic003G366000--Sobic004G302700 Sobic003G366000--Sobic010G192500 Sobic003G366000--Sobic001G390400 Sobic003G366000--Sobic001G160000 Sobic001G046400 Sobic001G046400 Sobic003G366000--Sobic001G046400 Sobic003G366000--Sobic008G190000 Sobic002G206100--Sobic006G050900 Sobic002G206100--Sobic003G366000 Sobic002G206100--Sobic006G110850 Sobic002G206100--Sobic001G390400 Sobic002G206100--Sobic008G042200 Sobic006G276900 Sobic006G276900 Sobic002G206100--Sobic006G276900 Sobic002G206100--Sobic001G160000 Sobic009G208300 Sobic009G208300 Sobic002G206100--Sobic009G208300 Sobic002G206100--Sobic008G190000 Sobic010G020600 Sobic010G020600 Sobic004G317200--Sobic010G020600 Sobic004G357000 Sobic004G357000 Sobic004G317200--Sobic004G357000 Sobic001G470200 Sobic001G470200 Sobic004G317200--Sobic001G470200 Sobic003G089300 Sobic003G089300 Sobic004G317200--Sobic003G089300 Sobic004G317200--Sobic001G390400 Sobic006G241800 Sobic006G241800 Sobic004G317200--Sobic006G241800 Sobic007G211200 Sobic007G211200 Sobic004G317200--Sobic007G211200 Sobic004G317200--Sobic007G160300 Sobic006G058000 Sobic006G058000 Sobic004G317200--Sobic006G058000 Sobic010G023400--Sobic004G234500 Sobic010G023400--Sobic010G241100 Sobic010G023400--Sobic002G337600 Sobic010G023400--Sobic010G192500 Sobic003G283900 Sobic003G283900 Sobic010G023400--Sobic003G283900 Sobic010G023400--Sobic006G058000 Sobic010G023400--Sobic001G046400 Sobic003G041900 Sobic003G041900 Sobic010G023400--Sobic003G041900 Sobic006G274200 Sobic006G274200 Sobic010G023400--Sobic006G274200
Octagon: transcription factors


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