Gene annotation
Transcriptome id Sobic.002G206100.1
Synonym Sb02g025060
Functional annotation aspartic proteinase, putative, expressed
UniProt C5XCX8
Pfam PF00026
Panther DB PTHR13683 PTHR13683:SF263
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT1G79720 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os09g25570.1 : aspartic proteinase, putative, expressed
MaizeGDB (Corn) Zm00025a047059
Brachypodium KQJ90289 , KQJ95841
Barley HORVU5Hr1G064080.1 , HORVU5Hr1G064080.3 , HORVU5Hr1G064080.2 , HORVU5Hr1G064080.5
Wheat TraesCS5D02G229700 , TraesCS5B02G220700 , TraesCS5A02G221900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G050900 expressed protein -
2 Sobic.003G366000 DUF623 domain containing protein, expressed -
3 Sobic.006G110850 - -
4 Sobic.001G390400 expressed protein -
5 Sobic.008G042200 DUF623 domain containing protein, expressed -
6 Sobic.006G276900 expressed protein -
7 Sobic.001G160000 LSTK-1-like kinase, putative, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
8 Sobic.009G208300 TOO MANY MOUTHS precursor, putative, expressed -
9 Sobic.008G190000 leucine-rich repeat family protein, putative, expressed -
10 Sobic.001G135600 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.005G092700 expressed protein -
12 Sobic.009G060800 carboxyl-terminal proteinase, putative, expressed -
13 Sobic.003G100400 TOO MANY MOUTHS precursor, putative, expressed -
14 Sobic.003G089300 heavy-metal-associated domain-containing protein, putative, expressed -
15 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -
16 Sobic.004G317200 "Upregulated to a greater extent than that of SbER1 in stem in response to drouht stress, not expredded in roots. SbER2 fusion protein localized on the cell membrane and chloroplast. Net photosynthetic rate and WUE, phenylpropanoid biosynthetic genes expression, and lignin content increased in overexpressing maize."(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
17 Sobic.003G041900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
18 Sobic.001G075700 AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
19 Sobic.001G381100 receptor-like protein kinase precursor, putative, expressed -
20 Sobic.004G302700 YABBY domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G206100 Sobic002G206100 Sobic006G050900 Sobic006G050900 Sobic002G206100--Sobic006G050900 Sobic003G366000 Sobic003G366000 Sobic002G206100--Sobic003G366000 Sobic006G110850 Sobic006G110850 Sobic002G206100--Sobic006G110850 Sobic001G390400 Sobic001G390400 Sobic002G206100--Sobic001G390400 Sobic008G042200 Sobic008G042200 Sobic002G206100--Sobic008G042200 Sobic006G276900 Sobic006G276900 Sobic002G206100--Sobic006G276900 Sobic001G160000 Sobic001G160000 Sobic002G206100--Sobic001G160000 Sobic009G208300 Sobic009G208300 Sobic002G206100--Sobic009G208300 Sobic008G190000 Sobic008G190000 Sobic002G206100--Sobic008G190000 Sobic006G050900--Sobic001G390400 Sobic006G050900--Sobic008G190000 Sobic010G241100 Sobic010G241100 Sobic006G050900--Sobic010G241100 Sobic010G086000 Sobic010G086000 Sobic006G050900--Sobic010G086000 Sobic006G142500 Sobic006G142500 Sobic006G050900--Sobic006G142500 Sobic006G050900--Sobic003G366000 Sobic006G050900--Sobic002G206100 Sobic004G317200 Sobic004G317200 Sobic006G050900--Sobic004G317200 Sobic010G023400 Sobic010G023400 Sobic006G050900--Sobic010G023400 Sobic003G366000--Sobic006G110850 Sobic006G187000 Sobic006G187000 Sobic003G366000--Sobic006G187000 Sobic009G060800 Sobic009G060800 Sobic003G366000--Sobic009G060800 Sobic004G302700 Sobic004G302700 Sobic003G366000--Sobic004G302700 Sobic010G192500 Sobic010G192500 Sobic003G366000--Sobic010G192500 Sobic003G366000--Sobic001G390400 Sobic003G366000--Sobic001G160000 Sobic001G046400 Sobic001G046400 Sobic003G366000--Sobic001G046400 Sobic003G366000--Sobic008G190000 Sobic006G110850--Sobic003G366000 Sobic006G110850--Sobic008G042200 Sobic005G092700 Sobic005G092700 Sobic006G110850--Sobic005G092700 Sobic006G110850--Sobic001G390400 Sobic006G110850--Sobic004G302700 Sobic006G110850--Sobic008G190000 Sobic006G110850--Sobic009G060800 Sobic004G115700 Sobic004G115700 Sobic006G110850--Sobic004G115700 Sobic006G110850--Sobic002G206100 Sobic001G390400--Sobic003G366000 Sobic005G163400 Sobic005G163400 Sobic001G390400--Sobic005G163400 Sobic001G390400--Sobic006G050900 Sobic002G050700 Sobic002G050700 Sobic001G390400--Sobic002G050700 Sobic001G390400--Sobic010G192500 Sobic001G390400--Sobic004G317200 Sobic002G319300 Sobic002G319300 Sobic001G390400--Sobic002G319300 Sobic010G024500 Sobic010G024500 Sobic001G390400--Sobic010G024500 Sobic001G390400--Sobic006G142500 Sobic009G200000 Sobic009G200000 Sobic008G042200--Sobic009G200000 Sobic008G042200--Sobic005G092700 Sobic008G042200--Sobic004G115700 Sobic008G042200--Sobic008G190000 Sobic008G042200--Sobic003G366000 Sobic006G240900 Sobic006G240900 Sobic008G042200--Sobic006G240900 Sobic008G042200--Sobic006G110850 Sobic005G125300 Sobic005G125300 Sobic008G042200--Sobic005G125300 Sobic009G207400 Sobic009G207400 Sobic008G042200--Sobic009G207400 Sobic006G140801 Sobic006G140801 Sobic006G276900--Sobic006G140801 Sobic010G213000 Sobic010G213000 Sobic006G276900--Sobic010G213000 Sobic006G276900--Sobic008G190000 Sobic006G276900--Sobic006G050900 Sobic006G276900--Sobic002G206100 Sobic007G067900 Sobic007G067900 Sobic006G276900--Sobic007G067900 Sobic006G276900--Sobic001G160000 Sobic001G075700 Sobic001G075700 Sobic006G276900--Sobic001G075700 Sobic001G381100 Sobic001G381100 Sobic006G276900--Sobic001G381100 Sobic001G160000--Sobic006G187000 Sobic001G160000--Sobic008G190000 Sobic001G160000--Sobic003G366000 Sobic001G160000--Sobic001G381100 Sobic001G160000--Sobic005G092700 Sobic001G160000--Sobic010G192500 Sobic001G160000--Sobic001G075700 Sobic001G267100 Sobic001G267100 Sobic001G160000--Sobic001G267100 Sobic005G091000 Sobic005G091000 Sobic001G160000--Sobic005G091000 Sobic009G208300--Sobic009G060800 Sobic009G208300--Sobic010G192500 Sobic007G209200 Sobic007G209200 Sobic009G208300--Sobic007G209200 Sobic009G208300--Sobic003G366000 Sobic001G473500 Sobic001G473500 Sobic009G208300--Sobic001G473500 Sobic009G208300--Sobic001G390400 Sobic001G286700 Sobic001G286700 Sobic009G208300--Sobic001G286700 Sobic009G188500 Sobic009G188500 Sobic009G208300--Sobic009G188500 Sobic009G208300--Sobic001G046400 Sobic008G190000--Sobic001G381100 Sobic008G190000--Sobic005G092700 Sobic008G190000--Sobic001G160000 Sobic008G190000--Sobic010G024500 Sobic008G190000--Sobic003G366000 Sobic008G190000--Sobic008G042200 Sobic002G286700 Sobic002G286700 Sobic008G190000--Sobic002G286700 Sobic008G190000--Sobic009G200000 Sobic008G190000--Sobic004G115700
Octagon: transcription factors


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