Gene annotation
Transcriptome id Sobic.006G276900.1
Synonym Sb06g033790
Functional annotation expressed protein
UniProt A0A1B6PP95
Pfam -
Panther DB PTHR36363
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G18800 : -
RAP-DB (Rice) LOC_Os04g59050.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQJ85434
Barley -
Wheat TraesCS2B02G610900 , TraesCS2A02G576500 , TraesCS2D02G587200
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G140801 - -
2 Sobic.010G213000 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
3 Sobic.008G190000 leucine-rich repeat family protein, putative, expressed -
4 Sobic.006G050900 expressed protein -
5 Sobic.002G206100 aspartic proteinase, putative, expressed -
6 Sobic.007G067900 expressed protein -
7 Sobic.001G160000 LSTK-1-like kinase, putative, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
8 Sobic.001G075700 AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
9 Sobic.001G381100 receptor-like protein kinase precursor, putative, expressed -
10 Sobic.005G092700 expressed protein -
11 Sobic.003G041900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
12 Sobic.010G023400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
13 Sobic.004G164700 expressed protein -
14 Sobic.006G187000 leucine-rich repeat family protein, putative, expressed -
15 Sobic.004G329000 OsSCP10 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
16 Sobic.006G142500 protein kinase, putative, expressed -
17 Sobic.001G135600 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.003G366000 DUF623 domain containing protein, expressed -
19 Sobic.001G390400 expressed protein -
20 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic006G276900 Sobic006G276900 Sobic006G140801 Sobic006G140801 Sobic006G276900--Sobic006G140801 Sobic010G213000 Sobic010G213000 Sobic006G276900--Sobic010G213000 Sobic008G190000 Sobic008G190000 Sobic006G276900--Sobic008G190000 Sobic006G050900 Sobic006G050900 Sobic006G276900--Sobic006G050900 Sobic002G206100 Sobic002G206100 Sobic006G276900--Sobic002G206100 Sobic007G067900 Sobic007G067900 Sobic006G276900--Sobic007G067900 Sobic001G160000 Sobic001G160000 Sobic006G276900--Sobic001G160000 Sobic001G075700 Sobic001G075700 Sobic006G276900--Sobic001G075700 Sobic001G381100 Sobic001G381100 Sobic006G276900--Sobic001G381100 Sobic010G014700 Sobic010G014700 Sobic006G140801--Sobic010G014700 Sobic007G160300 Sobic007G160300 Sobic006G140801--Sobic007G160300 Sobic009G146700 Sobic009G146700 Sobic006G140801--Sobic009G146700 Sobic001G074000 Sobic001G074000 Sobic006G140801--Sobic001G074000 Sobic003G070600 Sobic003G070600 Sobic006G140801--Sobic003G070600 Sobic004G317200 Sobic004G317200 Sobic006G140801--Sobic004G317200 Sobic003G338700 Sobic003G338700 Sobic006G140801--Sobic003G338700 Sobic006G274200 Sobic006G274200 Sobic006G140801--Sobic006G274200 Sobic004G211700 Sobic004G211700 Sobic006G140801--Sobic004G211700 Sobic010G213000--Sobic006G276900 Sobic001G061400 Sobic001G061400 Sobic010G213000--Sobic001G061400 Sobic001G519100 Sobic001G519100 Sobic010G213000--Sobic001G519100 Sobic010G213000--Sobic007G067900 Sobic007G097100 Sobic007G097100 Sobic010G213000--Sobic007G097100 Sobic002G265200 Sobic002G265200 Sobic010G213000--Sobic002G265200 Sobic001G088400 Sobic001G088400 Sobic010G213000--Sobic001G088400 Sobic001G170301 Sobic001G170301 Sobic010G213000--Sobic001G170301 Sobic010G213000--Sobic001G075700 Sobic008G190000--Sobic001G381100 Sobic005G092700 Sobic005G092700 Sobic008G190000--Sobic005G092700 Sobic008G190000--Sobic001G160000 Sobic010G024500 Sobic010G024500 Sobic008G190000--Sobic010G024500 Sobic003G366000 Sobic003G366000 Sobic008G190000--Sobic003G366000 Sobic008G042200 Sobic008G042200 Sobic008G190000--Sobic008G042200 Sobic002G286700 Sobic002G286700 Sobic008G190000--Sobic002G286700 Sobic009G200000 Sobic009G200000 Sobic008G190000--Sobic009G200000 Sobic004G115700 Sobic004G115700 Sobic008G190000--Sobic004G115700 Sobic001G390400 Sobic001G390400 Sobic006G050900--Sobic001G390400 Sobic006G050900--Sobic008G190000 Sobic010G241100 Sobic010G241100 Sobic006G050900--Sobic010G241100 Sobic010G086000 Sobic010G086000 Sobic006G050900--Sobic010G086000 Sobic006G142500 Sobic006G142500 Sobic006G050900--Sobic006G142500 Sobic006G050900--Sobic003G366000 Sobic006G050900--Sobic002G206100 Sobic006G050900--Sobic004G317200 Sobic010G023400 Sobic010G023400 Sobic006G050900--Sobic010G023400 Sobic002G206100--Sobic006G050900 Sobic002G206100--Sobic003G366000 Sobic006G110850 Sobic006G110850 Sobic002G206100--Sobic006G110850 Sobic002G206100--Sobic001G390400 Sobic002G206100--Sobic008G042200 Sobic002G206100--Sobic006G276900 Sobic002G206100--Sobic001G160000 Sobic009G208300 Sobic009G208300 Sobic002G206100--Sobic009G208300 Sobic002G206100--Sobic008G190000 Sobic007G067900--Sobic006G276900 Sobic007G067900--Sobic006G140801 Sobic007G067900--Sobic010G213000 Sobic001G135600 Sobic001G135600 Sobic007G067900--Sobic001G135600 Sobic007G067900--Sobic001G088400 Sobic010G206400 Sobic010G206400 Sobic007G067900--Sobic010G206400 Sobic007G067900--Sobic002G206100 Sobic002G113600 Sobic002G113600 Sobic007G067900--Sobic002G113600 Sobic005G164900 Sobic005G164900 Sobic007G067900--Sobic005G164900 Sobic006G187000 Sobic006G187000 Sobic001G160000--Sobic006G187000 Sobic001G160000--Sobic008G190000 Sobic001G160000--Sobic003G366000 Sobic001G160000--Sobic001G381100 Sobic001G160000--Sobic005G092700 Sobic010G192500 Sobic010G192500 Sobic001G160000--Sobic010G192500 Sobic001G160000--Sobic001G075700 Sobic001G267100 Sobic001G267100 Sobic001G160000--Sobic001G267100 Sobic005G091000 Sobic005G091000 Sobic001G160000--Sobic005G091000 Sobic001G075700--Sobic001G160000 Sobic001G075700--Sobic005G092700 Sobic001G075700--Sobic008G042200 Sobic001G075700--Sobic008G190000 Sobic005G125300 Sobic005G125300 Sobic001G075700--Sobic005G125300 Sobic004G302700 Sobic004G302700 Sobic001G075700--Sobic004G302700 Sobic001G075700--Sobic009G200000 Sobic001G075700--Sobic006G187000 Sobic001G075700--Sobic003G366000 Sobic001G381100--Sobic008G190000 Sobic001G381100--Sobic001G160000 Sobic001G074100 Sobic001G074100 Sobic001G381100--Sobic001G074100 Sobic006G074900 Sobic006G074900 Sobic001G381100--Sobic006G074900 Sobic001G381100--Sobic005G092700 Sobic004G168600 Sobic004G168600 Sobic001G381100--Sobic004G168600 Sobic001G381100--Sobic010G024500 Sobic006G241800 Sobic006G241800 Sobic001G381100--Sobic006G241800 Sobic001G381100--Sobic003G366000
Octagon: transcription factors


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