Gene annotation
Transcriptome id Sobic.004G329000.1,Sobic.004G329000.2
Synonym Sb04g035810, SCPL24, BRS1
Functional annotation OsSCP10 - Putative Serine Carboxypeptidase homologue, expressed
UniProt A0A1Z5RQ31 , A0A1Z5RQ62
Pfam PF00450
Panther DB PTHR11802 PTHR11802:SF87
NCBI CDD -
KEGG Orthology K16297; serine carboxypeptidase-like clade II
Gene Ontology GO:0006508; proteolysis GO:0004185serine-type carboxypeptidase activity


Orthologs (automatic annotation)
TAIR AT4G30610 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os02g55130.2,LOC_Os02g55130.1 : OsSCP10 - Putative Serine Carboxypeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a022455 , Zm00025a049742
Brachypodium KQK01131 , PNT64737 , KQK19241 , KQK19240
Barley HORVU6Hr1G084770.10 , HORVU6Hr1G084770.11 , HORVU6Hr1G084770.12 , HORVU5Hr1G069460.1 , HORVU6Hr1G084770.14 , HORVU6Hr1G084770.15 , HORVU6Hr1G084770.16 , HORVU6Hr1G084770.17 , HORVU6Hr1G084770.13 , HORVU6Hr1G084770.18 , HORVU6Hr1G084770.19 , HORVU6Hr1G084770.20 , HORVU6Hr1G084770.8 , HORVU6Hr1G084770.9 , HORVU6Hr1G084770.6 , HORVU6Hr1G084770.7 , HORVU6Hr1G084770.4 , HORVU6Hr1G084770.5 , HORVU6Hr1G084770.2 , HORVU6Hr1G084770.3 , HORVU6Hr1G084770.1
Wheat TraesCS6A02G356500 , TraesCS6B02G205500 , TraesCS6D02G165200 , TraesCS6D02G165200 , TraesCS6B02G388600 , TraesCS5D02G251100 , TraesCS6A02G179800 , TraesCS6A02G179800 , TraesCS6D02G338700 , TraesCS6D02G338700 , TraesCS6D02G165200
Populus -


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cDNA sequences
Sobic.004G329000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G257900 expressed protein -
2 Sobic.003G351900 fasciclin-like arabinogalactan protein, putative, expressed -
3 Sobic.004G113900 polygalacturonase, putative, expressed -
4 Sobic.003G251700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed K14486: K14486, auxin response factor
5 Sobic.006G142500 protein kinase, putative, expressed -
6 Sobic.004G164700 expressed protein -
7 Sobic.008G190000 leucine-rich repeat family protein, putative, expressed -
8 Sobic.006G050900 expressed protein -
9 Sobic.001G452900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
10 Sobic.001G461800 zinc finger family protein, putative, expressed -
11 Sobic.006G276900 expressed protein -
12 Sobic.006G147900 expressed protein -
13 Sobic.001G470200 membrane associated DUF588 domain containing protein, putative, expressed -
14 Sobic.004G317200 "Upregulated to a greater extent than that of SbER1 in stem in response to drouht stress, not expredded in roots. SbER2 fusion protein localized on the cell membrane and chloroplast. Net photosynthetic rate and WUE, phenylpropanoid biosynthetic genes expression, and lignin content increased in overexpressing maize."(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
15 Sobic.004G108400 heavy-metal-associated domain-containing protein, putative, expressed -
16 Sobic.006G058000 OsSCP24 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
17 Sobic.004G313900 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
18 Sobic.006G172000 pectinesterase, putative, expressed -
19 Sobic.003G041900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
20 Sobic.010G086000 cyclin, putative, expressed K18810: cyclin D1/2/4, plant


Gene co-expression network
sample Sobic004G329000 Sobic004G329000 Sobic009G257900 Sobic009G257900 Sobic004G329000--Sobic009G257900 Sobic003G351900 Sobic003G351900 Sobic004G329000--Sobic003G351900 Sobic004G113900 Sobic004G113900 Sobic004G329000--Sobic004G113900 Sobic003G251700 Sobic003G251700 Sobic004G329000--Sobic003G251700 Sobic006G142500 Sobic006G142500 Sobic004G329000--Sobic006G142500 Sobic004G164700 Sobic004G164700 Sobic004G329000--Sobic004G164700 Sobic008G190000 Sobic008G190000 Sobic004G329000--Sobic008G190000 Sobic006G050900 Sobic006G050900 Sobic004G329000--Sobic006G050900 Sobic001G452900 Sobic001G452900 Sobic004G329000--Sobic001G452900 Sobic004G317200 Sobic004G317200 Sobic009G257900--Sobic004G317200 Sobic004G108400 Sobic004G108400 Sobic009G257900--Sobic004G108400 Sobic009G025400 Sobic009G025400 Sobic009G257900--Sobic009G025400 Sobic005G129600 Sobic005G129600 Sobic009G257900--Sobic005G129600 Sobic004G313900 Sobic004G313900 Sobic009G257900--Sobic004G313900 Sobic009G257900--Sobic004G329000 Sobic001G390400 Sobic001G390400 Sobic009G257900--Sobic001G390400 Sobic004G357000 Sobic004G357000 Sobic009G257900--Sobic004G357000 Sobic009G257900--Sobic004G113900 Sobic003G351900--Sobic006G142500 Sobic001G079900 Sobic001G079900 Sobic003G351900--Sobic001G079900 Sobic002G006100 Sobic002G006100 Sobic003G351900--Sobic002G006100 Sobic002G027600 Sobic002G027600 Sobic003G351900--Sobic002G027600 Sobic003G153900 Sobic003G153900 Sobic003G351900--Sobic003G153900 Sobic001G212600 Sobic001G212600 Sobic003G351900--Sobic001G212600 Sobic005G032600 Sobic005G032600 Sobic003G351900--Sobic005G032600 Sobic003G351900--Sobic004G164700 Sobic001G395200 Sobic001G395200 Sobic003G351900--Sobic001G395200 Sobic004G113900--Sobic005G129600 Sobic003G432000 Sobic003G432000 Sobic004G113900--Sobic003G432000 Sobic002G035500 Sobic002G035500 Sobic004G113900--Sobic002G035500 Sobic004G113900--Sobic009G257900 Sobic001G267800 Sobic001G267800 Sobic004G113900--Sobic001G267800 Sobic002G260600 Sobic002G260600 Sobic004G113900--Sobic002G260600 Sobic007G211200 Sobic007G211200 Sobic004G113900--Sobic007G211200 Sobic001G247700 Sobic001G247700 Sobic004G113900--Sobic001G247700 Sobic004G115700 Sobic004G115700 Sobic004G113900--Sobic004G115700 Sobic006G172000 Sobic006G172000 Sobic003G251700--Sobic006G172000 Sobic004G269100 Sobic004G269100 Sobic003G251700--Sobic004G269100 Sobic004G215100 Sobic004G215100 Sobic003G251700--Sobic004G215100 Sobic001G493100 Sobic001G493100 Sobic003G251700--Sobic001G493100 Sobic006G135800 Sobic006G135800 Sobic003G251700--Sobic006G135800 Sobic002G259200 Sobic002G259200 Sobic003G251700--Sobic002G259200 Sobic006G226000 Sobic006G226000 Sobic003G251700--Sobic006G226000 Sobic005G092700 Sobic005G092700 Sobic003G251700--Sobic005G092700 Sobic006G041700 Sobic006G041700 Sobic003G251700--Sobic006G041700 Sobic010G086000 Sobic010G086000 Sobic006G142500--Sobic010G086000 Sobic004G267600 Sobic004G267600 Sobic006G142500--Sobic004G267600 Sobic010G192500 Sobic010G192500 Sobic006G142500--Sobic010G192500 Sobic009G225500 Sobic009G225500 Sobic006G142500--Sobic009G225500 Sobic003G032200 Sobic003G032200 Sobic006G142500--Sobic003G032200 Sobic004G234500 Sobic004G234500 Sobic006G142500--Sobic004G234500 Sobic009G127800 Sobic009G127800 Sobic006G142500--Sobic009G127800 Sobic009G047000 Sobic009G047000 Sobic006G142500--Sobic009G047000 Sobic006G142500--Sobic001G390400 Sobic006G241800 Sobic006G241800 Sobic004G164700--Sobic006G241800 Sobic002G362700 Sobic002G362700 Sobic004G164700--Sobic002G362700 Sobic004G164700--Sobic008G190000 Sobic001G461800 Sobic001G461800 Sobic004G164700--Sobic001G461800 Sobic004G164700--Sobic006G142500 Sobic010G024500 Sobic010G024500 Sobic004G164700--Sobic010G024500 Sobic003G041900 Sobic003G041900 Sobic004G164700--Sobic003G041900 Sobic001G425700 Sobic001G425700 Sobic004G164700--Sobic001G425700 Sobic004G164700--Sobic010G086000 Sobic001G381100 Sobic001G381100 Sobic008G190000--Sobic001G381100 Sobic008G190000--Sobic005G092700 Sobic001G160000 Sobic001G160000 Sobic008G190000--Sobic001G160000 Sobic008G190000--Sobic010G024500 Sobic003G366000 Sobic003G366000 Sobic008G190000--Sobic003G366000 Sobic008G042200 Sobic008G042200 Sobic008G190000--Sobic008G042200 Sobic002G286700 Sobic002G286700 Sobic008G190000--Sobic002G286700 Sobic009G200000 Sobic009G200000 Sobic008G190000--Sobic009G200000 Sobic008G190000--Sobic004G115700 Sobic006G050900--Sobic001G390400 Sobic006G050900--Sobic008G190000 Sobic010G241100 Sobic010G241100 Sobic006G050900--Sobic010G241100 Sobic006G050900--Sobic010G086000 Sobic006G050900--Sobic006G142500 Sobic006G050900--Sobic003G366000 Sobic002G206100 Sobic002G206100 Sobic006G050900--Sobic002G206100 Sobic006G050900--Sobic004G317200 Sobic010G023400 Sobic010G023400 Sobic006G050900--Sobic010G023400 Sobic001G452900--Sobic010G086000 Sobic001G452900--Sobic010G241100 Sobic001G452900--Sobic004G108400 Sobic001G452900--Sobic010G192500 Sobic001G452900--Sobic006G142500 Sobic001G452900--Sobic003G032200 Sobic002G284100 Sobic002G284100 Sobic001G452900--Sobic002G284100 Sobic001G452900--Sobic004G267600 Sobic009G172950 Sobic009G172950 Sobic001G452900--Sobic009G172950
Octagon: transcription factors


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