Gene annotation
Transcriptome id Sobic.009G257900.1
Synonym Sb09g030760
Functional annotation expressed protein
UniProt A0A1Z5R533
Pfam -
Panther DB PTHR34677 PTHR34677:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G48200 : -
RAP-DB (Rice) LOC_Os05g51620.1 : expressed protein
MaizeGDB (Corn) Zm00025a036819
Brachypodium KQJ99954 , KQJ99955
Barley HORVU3Hr1G030250.16 , HORVU3Hr1G030250.13 , HORVU3Hr1G030250.19 , HORVU3Hr1G030250.18 , HORVU3Hr1G030250.31 , HORVU3Hr1G030250.33 , HORVU3Hr1G030250.35 , HORVU3Hr1G030250.34 , HORVU3Hr1G030250.37 , HORVU3Hr1G030250.28 , HORVU3Hr1G030250.26 , HORVU3Hr1G030250.27 , HORVU3Hr1G030250.24 , HORVU3Hr1G030250.25 , HORVU3Hr1G030250.23 , HORVU3Hr1G030250.12 , HORVU3Hr1G030250.5 , HORVU3Hr1G030250.4 , HORVU3Hr1G030250.3 , HORVU3Hr1G030250.2 , HORVU3Hr1G030250.1
Wheat TraesCS3A02G148800 , TraesCS3A02G148800 , TraesCS3A02G148800 , TraesCS3A02G148800 , TraesCS3A02G148800 , TraesCS3D02G156700 , TraesCS3D02G156700 , TraesCS3D02G156700 , TraesCS3B02G176000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G317200 "Upregulated to a greater extent than that of SbER1 in stem in response to drouht stress, not expredded in roots. SbER2 fusion protein localized on the cell membrane and chloroplast. Net photosynthetic rate and WUE, phenylpropanoid biosynthetic genes expression, and lignin content increased in overexpressing maize."(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
2 Sobic.004G108400 heavy-metal-associated domain-containing protein, putative, expressed -
3 Sobic.009G025400 myosin heavy chain-related, putative, expressed -
4 Sobic.005G129600 OsSCP63 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
5 Sobic.004G313900 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
6 Sobic.004G329000 OsSCP10 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
7 Sobic.001G390400 expressed protein -
8 Sobic.004G357000 inactive receptor kinase At2g26730 precursor, putative, expressed -
9 Sobic.004G113900 polygalacturonase, putative, expressed -
10 Sobic.003G083500 inactive receptor kinase At2g26730 precursor, putative, expressed -
11 Sobic.002G035500 CIN-like (ClassII) Subclade 13 TCP(PubMedID : 21444336)@basic helix-loop-helix (bHLH) transcription factor(PubMedID : 23915383)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
12 Sobic.002G394200 expressed protein K15711: SMARCA3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3
13 Sobic.004G115700 extra-large G-protein-related, putative, expressed -
14 Sobic.003G373900 universal stress protein domain containing protein, putative, expressed -
15 Sobic.005G092700 expressed protein -
16 Sobic.006G050900 expressed protein -
17 Sobic.006G142500 protein kinase, putative, expressed -
18 Sobic.003G366000 DUF623 domain containing protein, expressed -
19 Sobic.009G195600 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
20 Sobic.007G211200 inactive receptor kinase At2g26730 precursor, putative, expressed -


Gene co-expression network
sample Sobic009G257900 Sobic009G257900 Sobic004G317200 Sobic004G317200 Sobic009G257900--Sobic004G317200 Sobic004G108400 Sobic004G108400 Sobic009G257900--Sobic004G108400 Sobic009G025400 Sobic009G025400 Sobic009G257900--Sobic009G025400 Sobic005G129600 Sobic005G129600 Sobic009G257900--Sobic005G129600 Sobic004G313900 Sobic004G313900 Sobic009G257900--Sobic004G313900 Sobic004G329000 Sobic004G329000 Sobic009G257900--Sobic004G329000 Sobic001G390400 Sobic001G390400 Sobic009G257900--Sobic001G390400 Sobic004G357000 Sobic004G357000 Sobic009G257900--Sobic004G357000 Sobic004G113900 Sobic004G113900 Sobic009G257900--Sobic004G113900 Sobic010G020600 Sobic010G020600 Sobic004G317200--Sobic010G020600 Sobic004G317200--Sobic004G357000 Sobic001G470200 Sobic001G470200 Sobic004G317200--Sobic001G470200 Sobic003G089300 Sobic003G089300 Sobic004G317200--Sobic003G089300 Sobic004G317200--Sobic001G390400 Sobic006G241800 Sobic006G241800 Sobic004G317200--Sobic006G241800 Sobic007G211200 Sobic007G211200 Sobic004G317200--Sobic007G211200 Sobic007G160300 Sobic007G160300 Sobic004G317200--Sobic007G160300 Sobic006G058000 Sobic006G058000 Sobic004G317200--Sobic006G058000 Sobic001G054700 Sobic001G054700 Sobic004G108400--Sobic001G054700 Sobic006G221300 Sobic006G221300 Sobic004G108400--Sobic006G221300 Sobic009G143200 Sobic009G143200 Sobic004G108400--Sobic009G143200 Sobic001G452900 Sobic001G452900 Sobic004G108400--Sobic001G452900 Sobic007G008300 Sobic007G008300 Sobic004G108400--Sobic007G008300 Sobic009G127800 Sobic009G127800 Sobic004G108400--Sobic009G127800 Sobic007G162400 Sobic007G162400 Sobic004G108400--Sobic007G162400 Sobic002G050700 Sobic002G050700 Sobic004G108400--Sobic002G050700 Sobic009G101100 Sobic009G101100 Sobic004G108400--Sobic009G101100 Sobic005G056800 Sobic005G056800 Sobic009G025400--Sobic005G056800 Sobic010G202100 Sobic010G202100 Sobic009G025400--Sobic010G202100 Sobic009G025400--Sobic004G108400 Sobic002G394200 Sobic002G394200 Sobic009G025400--Sobic002G394200 Sobic009G025400--Sobic009G257900 Sobic006G112800 Sobic006G112800 Sobic009G025400--Sobic006G112800 Sobic003G414400 Sobic003G414400 Sobic009G025400--Sobic003G414400 Sobic001G284900 Sobic001G284900 Sobic009G025400--Sobic001G284900 Sobic003G083500 Sobic003G083500 Sobic009G025400--Sobic003G083500 Sobic005G129600--Sobic004G357000 Sobic005G129600--Sobic004G113900 Sobic003G432000 Sobic003G432000 Sobic005G129600--Sobic003G432000 Sobic005G129600--Sobic007G211200 Sobic001G267800 Sobic001G267800 Sobic005G129600--Sobic001G267800 Sobic002G035500 Sobic002G035500 Sobic005G129600--Sobic002G035500 Sobic005G129600--Sobic003G089300 Sobic005G129600--Sobic009G257900 Sobic005G129600--Sobic004G317200 Sobic004G313900--Sobic006G058000 Sobic004G313900--Sobic004G317200 Sobic004G313900--Sobic009G257900 Sobic004G313900--Sobic001G390400 Sobic003G366000 Sobic003G366000 Sobic004G313900--Sobic003G366000 Sobic005G092700 Sobic005G092700 Sobic004G313900--Sobic005G092700 Sobic004G234500 Sobic004G234500 Sobic004G313900--Sobic004G234500 Sobic004G313900--Sobic004G108400 Sobic004G269100 Sobic004G269100 Sobic004G313900--Sobic004G269100 Sobic004G329000--Sobic009G257900 Sobic003G351900 Sobic003G351900 Sobic004G329000--Sobic003G351900 Sobic004G329000--Sobic004G113900 Sobic003G251700 Sobic003G251700 Sobic004G329000--Sobic003G251700 Sobic006G142500 Sobic006G142500 Sobic004G329000--Sobic006G142500 Sobic004G164700 Sobic004G164700 Sobic004G329000--Sobic004G164700 Sobic008G190000 Sobic008G190000 Sobic004G329000--Sobic008G190000 Sobic006G050900 Sobic006G050900 Sobic004G329000--Sobic006G050900 Sobic004G329000--Sobic001G452900 Sobic001G390400--Sobic003G366000 Sobic005G163400 Sobic005G163400 Sobic001G390400--Sobic005G163400 Sobic001G390400--Sobic006G050900 Sobic001G390400--Sobic002G050700 Sobic010G192500 Sobic010G192500 Sobic001G390400--Sobic010G192500 Sobic001G390400--Sobic004G317200 Sobic002G319300 Sobic002G319300 Sobic001G390400--Sobic002G319300 Sobic010G024500 Sobic010G024500 Sobic001G390400--Sobic010G024500 Sobic001G390400--Sobic006G142500 Sobic004G357000--Sobic007G211200 Sobic003G113500 Sobic003G113500 Sobic004G357000--Sobic003G113500 Sobic004G357000--Sobic004G317200 Sobic004G357000--Sobic003G089300 Sobic004G248100 Sobic004G248100 Sobic004G357000--Sobic004G248100 Sobic002G032500 Sobic002G032500 Sobic004G357000--Sobic002G032500 Sobic004G357000--Sobic005G129600 Sobic004G357000--Sobic001G470200 Sobic004G211700 Sobic004G211700 Sobic004G357000--Sobic004G211700 Sobic004G113900--Sobic005G129600 Sobic004G113900--Sobic003G432000 Sobic004G113900--Sobic002G035500 Sobic004G113900--Sobic009G257900 Sobic004G113900--Sobic001G267800 Sobic002G260600 Sobic002G260600 Sobic004G113900--Sobic002G260600 Sobic004G113900--Sobic007G211200 Sobic001G247700 Sobic001G247700 Sobic004G113900--Sobic001G247700 Sobic004G115700 Sobic004G115700 Sobic004G113900--Sobic004G115700
Octagon: transcription factors


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