Gene annotation
Transcriptome id Sobic.003G083500.1
Synonym Sb03g007030
Functional annotation inactive receptor kinase At2g26730 precursor, putative, expressed
UniProt C5XQT6
Pfam PF08263 PF07714
Panther DB PTHR27008 PTHR27008:SF44
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G68400 : leucine-rich repeat transmembrane protein kinase family protein
RAP-DB (Rice) LOC_Os01g04230.1 : inactive receptor kinase At2g26730 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a013032 , Zm00025a028679 , Zm00025a057469 , Zm00025a023581
Brachypodium KQK08665 , KQK02561 , KQK19135
Barley HORVU3Hr1G007120.5 , HORVU3Hr1G007120.4 , HORVU3Hr1G007120.3 , HORVU3Hr1G007120.2 , HORVU3Hr1G007120.1
Wheat TraesCS5A02G013100 , TraesCS3A02G037200 , TraesCS3D02G042500 , TraesCS3B02G046700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G247700 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
2 Sobic.007G211200 inactive receptor kinase At2g26730 precursor, putative, expressed -
3 Sobic.001G265300 acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
4 Sobic.005G034500 receptor kinase, putative, expressed -
5 Sobic.004G357000 inactive receptor kinase At2g26730 precursor, putative, expressed -
6 Sobic.006G108100 LTPL81 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.005G129600 OsSCP63 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
8 Sobic.009G025400 myosin heavy chain-related, putative, expressed -
9 Sobic.009G257900 expressed protein -
10 Sobic.001G046400 expressed protein -
11 Sobic.007G181100 MATE efflux family protein("PubMedID : 26759170,PubMedID : 24597475")@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
12 Sobic.001G068800 expressed protein -
13 Sobic.002G425600 down-regulated TF in developmental senescence(PubMedID : 27586543)@bZIP transcription factor domain containing protein, expressed K14432: ABA responsive element binding factor
14 Sobic.002G312300 SQUAMOSA promoter binding-like transcription factor(PubMedID : 27016024)@OsSPL13 - SBP-box gene family member, expressed -
15 Sobic.003G027100 keratin, type I cytoskeletal 9, putative, expressed -
16 Sobic.003G113500 MFS18 protein precursor, putative, expressed -
17 Sobic.004G211700 - -
18 Sobic.007G038000 receptor-like protein kinase 5 precursor, putative, expressed -
19 Sobic.001G135600 GDSL-like lipase/acylhydrolase, putative, expressed -
20 Sobic.004G342000 WAX2, putative, expressed K15404: K15404, aldehyde decarbonylase


Gene co-expression network
sample Sobic003G083500 Sobic003G083500 Sobic001G247700 Sobic001G247700 Sobic003G083500--Sobic001G247700 Sobic007G211200 Sobic007G211200 Sobic003G083500--Sobic007G211200 Sobic001G265300 Sobic001G265300 Sobic003G083500--Sobic001G265300 Sobic005G034500 Sobic005G034500 Sobic003G083500--Sobic005G034500 Sobic004G357000 Sobic004G357000 Sobic003G083500--Sobic004G357000 Sobic006G108100 Sobic006G108100 Sobic003G083500--Sobic006G108100 Sobic005G129600 Sobic005G129600 Sobic003G083500--Sobic005G129600 Sobic009G025400 Sobic009G025400 Sobic003G083500--Sobic009G025400 Sobic009G257900 Sobic009G257900 Sobic003G083500--Sobic009G257900 Sobic007G181100 Sobic007G181100 Sobic001G247700--Sobic007G181100 Sobic001G247700--Sobic003G083500 Sobic001G247700--Sobic006G108100 Sobic001G068800 Sobic001G068800 Sobic001G247700--Sobic001G068800 Sobic002G260600 Sobic002G260600 Sobic001G247700--Sobic002G260600 Sobic003G113500 Sobic003G113500 Sobic001G247700--Sobic003G113500 Sobic001G247700--Sobic007G211200 Sobic001G247700--Sobic004G357000 Sobic001G247700--Sobic005G129600 Sobic001G046400 Sobic001G046400 Sobic007G211200--Sobic001G046400 Sobic007G211200--Sobic004G357000 Sobic003G089300 Sobic003G089300 Sobic007G211200--Sobic003G089300 Sobic002G032500 Sobic002G032500 Sobic007G211200--Sobic002G032500 Sobic004G211700 Sobic004G211700 Sobic007G211200--Sobic004G211700 Sobic004G342000 Sobic004G342000 Sobic007G211200--Sobic004G342000 Sobic007G211200--Sobic003G113500 Sobic001G135600 Sobic001G135600 Sobic007G211200--Sobic001G135600 Sobic002G337600 Sobic002G337600 Sobic007G211200--Sobic002G337600 Sobic001G265300--Sobic003G083500 Sobic007G170100 Sobic007G170100 Sobic001G265300--Sobic007G170100 Sobic001G265300--Sobic009G025400 Sobic004G336700 Sobic004G336700 Sobic001G265300--Sobic004G336700 Sobic002G312300 Sobic002G312300 Sobic001G265300--Sobic002G312300 Sobic001G265300--Sobic001G247700 Sobic005G009600 Sobic005G009600 Sobic001G265300--Sobic005G009600 Sobic003G027100 Sobic003G027100 Sobic001G265300--Sobic003G027100 Sobic006G273600 Sobic006G273600 Sobic001G265300--Sobic006G273600 Sobic005G034500--Sobic003G027100 Sobic003G178500 Sobic003G178500 Sobic005G034500--Sobic003G178500 Sobic005G034500--Sobic002G032500 Sobic005G055400 Sobic005G055400 Sobic005G034500--Sobic005G055400 Sobic005G034500--Sobic004G357000 Sobic010G166300 Sobic010G166300 Sobic005G034500--Sobic010G166300 Sobic005G034500--Sobic007G211200 Sobic005G034500--Sobic004G211700 Sobic001G341700 Sobic001G341700 Sobic005G034500--Sobic001G341700 Sobic004G357000--Sobic007G211200 Sobic004G357000--Sobic003G113500 Sobic004G317200 Sobic004G317200 Sobic004G357000--Sobic004G317200 Sobic004G357000--Sobic003G089300 Sobic004G248100 Sobic004G248100 Sobic004G357000--Sobic004G248100 Sobic004G357000--Sobic002G032500 Sobic004G357000--Sobic005G129600 Sobic001G470200 Sobic001G470200 Sobic004G357000--Sobic001G470200 Sobic004G357000--Sobic004G211700 Sobic006G108100--Sobic001G068800 Sobic006G108100--Sobic007G181100 Sobic006G108100--Sobic001G247700 Sobic002G115700 Sobic002G115700 Sobic006G108100--Sobic002G115700 Sobic006G108100--Sobic003G083500 Sobic002G425600 Sobic002G425600 Sobic006G108100--Sobic002G425600 Sobic001G438400 Sobic001G438400 Sobic006G108100--Sobic001G438400 Sobic004G202800 Sobic004G202800 Sobic006G108100--Sobic004G202800 Sobic006G006800 Sobic006G006800 Sobic006G108100--Sobic006G006800 Sobic005G129600--Sobic004G357000 Sobic004G113900 Sobic004G113900 Sobic005G129600--Sobic004G113900 Sobic003G432000 Sobic003G432000 Sobic005G129600--Sobic003G432000 Sobic005G129600--Sobic007G211200 Sobic001G267800 Sobic001G267800 Sobic005G129600--Sobic001G267800 Sobic002G035500 Sobic002G035500 Sobic005G129600--Sobic002G035500 Sobic005G129600--Sobic003G089300 Sobic005G129600--Sobic009G257900 Sobic005G129600--Sobic004G317200 Sobic005G056800 Sobic005G056800 Sobic009G025400--Sobic005G056800 Sobic010G202100 Sobic010G202100 Sobic009G025400--Sobic010G202100 Sobic004G108400 Sobic004G108400 Sobic009G025400--Sobic004G108400 Sobic002G394200 Sobic002G394200 Sobic009G025400--Sobic002G394200 Sobic009G025400--Sobic009G257900 Sobic006G112800 Sobic006G112800 Sobic009G025400--Sobic006G112800 Sobic003G414400 Sobic003G414400 Sobic009G025400--Sobic003G414400 Sobic001G284900 Sobic001G284900 Sobic009G025400--Sobic001G284900 Sobic009G025400--Sobic003G083500 Sobic009G257900--Sobic004G317200 Sobic009G257900--Sobic004G108400 Sobic009G257900--Sobic009G025400 Sobic009G257900--Sobic005G129600 Sobic004G313900 Sobic004G313900 Sobic009G257900--Sobic004G313900 Sobic004G329000 Sobic004G329000 Sobic009G257900--Sobic004G329000 Sobic001G390400 Sobic001G390400 Sobic009G257900--Sobic001G390400 Sobic009G257900--Sobic004G357000 Sobic009G257900--Sobic004G113900
Octagon: transcription factors


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