Gene annotation
Transcriptome id Sobic.009G025400.1,Sobic.009G025400.2
Synonym RIP3, Sb09g002140
Functional annotation myosin heavy chain-related, putative, expressed
UniProt A0A1Z5R0I7
Pfam -
Panther DB PTHR34224 PTHR34224:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37080 : ROP interactive partner 3
RAP-DB (Rice) LOC_Os05g03120.2,LOC_Os05g03120.1 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a040756
Brachypodium KQK07836
Barley HORVU1Hr1G012460.7 , HORVU1Hr1G012460.10 , HORVU1Hr1G012460.11 , HORVU1Hr1G012460.12 , HORVU1Hr1G012460.13 , HORVU1Hr1G012460.4 , HORVU1Hr1G012460.2 , HORVU1Hr1G012460.3 , HORVU1Hr1G012460.1 , HORVU1Hr1G012460.6 , HORVU1Hr1G012460.5 , HORVU1Hr1G012460.8 , HORVU1Hr1G012460.9
Wheat TraesCS1A02G060600 , TraesCS1A02G060600 , TraesCS1B02G078900 , TraesCS1B02G078900 , TraesCS1D02G061500 , TraesCS1D02G061500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G056800 FHA domain containing protein, putative, expressed -
2 Sobic.010G202100 expressed protein -
3 Sobic.004G108400 heavy-metal-associated domain-containing protein, putative, expressed -
4 Sobic.002G394200 expressed protein K15711: SMARCA3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3
5 Sobic.009G257900 expressed protein -
6 Sobic.006G112800 kinesin motor domain containing protein, expressed K10406: kinesin family member C2/C3
7 Sobic.003G414400 expressed protein -
8 Sobic.001G284900 expressed protein -
9 Sobic.003G083500 inactive receptor kinase At2g26730 precursor, putative, expressed -
10 Sobic.001G452900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
11 Sobic.001G265300 acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
12 Sobic.001G140600 expressed protein -
13 Sobic.008G114900 rhoGAP domain containing protein, expressed -
14 Sobic.007G019600 expressed protein -
15 Sobic.010G215300 cyclin-dependent kinase B2-1, putative, expressed K07760: cyclin-dependent kinase
16 Sobic.004G357000 inactive receptor kinase At2g26730 precursor, putative, expressed -
17 Sobic.006G201300 expressed protein -
18 Sobic.004G271300 DNA topoisomerase 2, putative, expressed K03164: DNA topoisomerase II
19 Sobic.005G129600 OsSCP63 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
20 Sobic.002G319300 IQ calmodulin-binding motif family protein, expressed K16743: ASPM, abnormal spindle-like microcephaly-associated protein


Gene co-expression network
sample Sobic009G025400 Sobic009G025400 Sobic005G056800 Sobic005G056800 Sobic009G025400--Sobic005G056800 Sobic010G202100 Sobic010G202100 Sobic009G025400--Sobic010G202100 Sobic004G108400 Sobic004G108400 Sobic009G025400--Sobic004G108400 Sobic002G394200 Sobic002G394200 Sobic009G025400--Sobic002G394200 Sobic009G257900 Sobic009G257900 Sobic009G025400--Sobic009G257900 Sobic006G112800 Sobic006G112800 Sobic009G025400--Sobic006G112800 Sobic003G414400 Sobic003G414400 Sobic009G025400--Sobic003G414400 Sobic001G284900 Sobic001G284900 Sobic009G025400--Sobic001G284900 Sobic003G083500 Sobic003G083500 Sobic009G025400--Sobic003G083500 Sobic005G056800--Sobic001G284900 Sobic005G056800--Sobic009G025400 Sobic004G271300 Sobic004G271300 Sobic005G056800--Sobic004G271300 Sobic003G047200 Sobic003G047200 Sobic005G056800--Sobic003G047200 Sobic005G056800--Sobic003G414400 Sobic010G215300 Sobic010G215300 Sobic005G056800--Sobic010G215300 Sobic005G056800--Sobic006G112800 Sobic001G540900 Sobic001G540900 Sobic005G056800--Sobic001G540900 Sobic007G130000 Sobic007G130000 Sobic005G056800--Sobic007G130000 Sobic010G202100--Sobic010G215300 Sobic010G234800 Sobic010G234800 Sobic010G202100--Sobic010G234800 Sobic001G098900 Sobic001G098900 Sobic010G202100--Sobic001G098900 Sobic007G017700 Sobic007G017700 Sobic010G202100--Sobic007G017700 Sobic010G202100--Sobic003G414400 Sobic010G202100--Sobic009G025400 Sobic010G202100--Sobic003G047200 Sobic006G201300 Sobic006G201300 Sobic010G202100--Sobic006G201300 Sobic008G114500 Sobic008G114500 Sobic010G202100--Sobic008G114500 Sobic001G054700 Sobic001G054700 Sobic004G108400--Sobic001G054700 Sobic006G221300 Sobic006G221300 Sobic004G108400--Sobic006G221300 Sobic009G143200 Sobic009G143200 Sobic004G108400--Sobic009G143200 Sobic001G452900 Sobic001G452900 Sobic004G108400--Sobic001G452900 Sobic007G008300 Sobic007G008300 Sobic004G108400--Sobic007G008300 Sobic009G127800 Sobic009G127800 Sobic004G108400--Sobic009G127800 Sobic007G162400 Sobic007G162400 Sobic004G108400--Sobic007G162400 Sobic002G050700 Sobic002G050700 Sobic004G108400--Sobic002G050700 Sobic009G101100 Sobic009G101100 Sobic004G108400--Sobic009G101100 Sobic002G394200--Sobic009G025400 Sobic002G394200--Sobic004G108400 Sobic002G420000 Sobic002G420000 Sobic002G394200--Sobic002G420000 Sobic002G394200--Sobic007G008300 Sobic002G394200--Sobic009G257900 Sobic001G295400 Sobic001G295400 Sobic002G394200--Sobic001G295400 Sobic001G494300 Sobic001G494300 Sobic002G394200--Sobic001G494300 Sobic002G394200--Sobic006G112800 Sobic002G394200--Sobic005G056800 Sobic004G317200 Sobic004G317200 Sobic009G257900--Sobic004G317200 Sobic009G257900--Sobic004G108400 Sobic009G257900--Sobic009G025400 Sobic005G129600 Sobic005G129600 Sobic009G257900--Sobic005G129600 Sobic004G313900 Sobic004G313900 Sobic009G257900--Sobic004G313900 Sobic004G329000 Sobic004G329000 Sobic009G257900--Sobic004G329000 Sobic001G390400 Sobic001G390400 Sobic009G257900--Sobic001G390400 Sobic004G357000 Sobic004G357000 Sobic009G257900--Sobic004G357000 Sobic004G113900 Sobic004G113900 Sobic009G257900--Sobic004G113900 Sobic006G112800--Sobic004G271300 Sobic003G032200 Sobic003G032200 Sobic006G112800--Sobic003G032200 Sobic006G112800--Sobic004G108400 Sobic002G204400 Sobic002G204400 Sobic006G112800--Sobic002G204400 Sobic002G296000 Sobic002G296000 Sobic006G112800--Sobic002G296000 Sobic007G027900 Sobic007G027900 Sobic006G112800--Sobic007G027900 Sobic006G112800--Sobic001G540900 Sobic007G168900 Sobic007G168900 Sobic006G112800--Sobic007G168900 Sobic006G112800--Sobic007G008300 Sobic003G414400--Sobic001G284900 Sobic003G414400--Sobic010G215300 Sobic003G414400--Sobic001G098900 Sobic003G414400--Sobic010G202100 Sobic003G414400--Sobic003G047200 Sobic003G414400--Sobic010G234800 Sobic006G155900 Sobic006G155900 Sobic003G414400--Sobic006G155900 Sobic001G070200 Sobic001G070200 Sobic003G414400--Sobic001G070200 Sobic003G414400--Sobic004G271300 Sobic001G284900--Sobic003G414400 Sobic001G284900--Sobic005G056800 Sobic001G284900--Sobic003G047200 Sobic001G284900--Sobic010G215300 Sobic001G284900--Sobic004G271300 Sobic001G284900--Sobic009G025400 Sobic001G427400 Sobic001G427400 Sobic001G284900--Sobic001G427400 Sobic010G017400 Sobic010G017400 Sobic001G284900--Sobic010G017400 Sobic001G284900--Sobic001G098900 Sobic001G247700 Sobic001G247700 Sobic003G083500--Sobic001G247700 Sobic007G211200 Sobic007G211200 Sobic003G083500--Sobic007G211200 Sobic001G265300 Sobic001G265300 Sobic003G083500--Sobic001G265300 Sobic005G034500 Sobic005G034500 Sobic003G083500--Sobic005G034500 Sobic003G083500--Sobic004G357000 Sobic006G108100 Sobic006G108100 Sobic003G083500--Sobic006G108100 Sobic003G083500--Sobic005G129600 Sobic003G083500--Sobic009G025400 Sobic003G083500--Sobic009G257900
Octagon: transcription factors


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