Gene annotation
Transcriptome id Sobic.006G201300.1
Synonym Sb06g027315
Functional annotation expressed protein
UniProt A0A1B6PMY3
Pfam -
Panther DB PTHR33621 PTHR33621:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G17160 : -
RAP-DB (Rice) LOC_Os04g50960.1 : expressed protein
MaizeGDB (Corn) Zm00025a056929 , Zm00025a032408
Brachypodium -
Barley -
Wheat TraesCS2D02G442600 , TraesCS2D02G442600
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G202100 expressed protein -
2 Sobic.001G140600 expressed protein -
3 Sobic.003G047200 expressed protein -
4 Sobic.009G025400 myosin heavy chain-related, putative, expressed -
5 Sobic.005G168400 expressed protein -
6 Sobic.010G234800 expressed protein -
7 Sobic.010G215300 cyclin-dependent kinase B2-1, putative, expressed K07760: cyclin-dependent kinase
8 Sobic.004G271300 DNA topoisomerase 2, putative, expressed K03164: DNA topoisomerase II
9 Sobic.002G313000 targeting protein-related, putative, expressed K16812: targeting protein for Xklp2
10 Sobic.008G125700 similar to F22D16.26 protein(PubMedID : 29862293)@CSLD4 - cellulose synthase-like family D, expressed K00770: 1,4-beta-D-xylan synthase
11 Sobic.006G219500 remorin family protein, putative, expressed -
12 Sobic.001G098900 syntaxin-related protein, putative, expressed K08486: syntaxin 1B/2/3
13 Sobic.005G056800 FHA domain containing protein, putative, expressed -
14 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
15 Sobic.004G198100 expressed protein -
16 Sobic.007G019600 expressed protein -
17 Sobic.004G307800 "SGL1(Ortholog in rice:Nakagawa et al., 2012)"(PubMedID : 31659889)@expressed protein -
18 Sobic.001G379900 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
19 Sobic.010G119300 expressed protein -
20 Sobic.001G384700 RNA-binding zinc finger protein, putative, expressed -


Gene co-expression network
sample Sobic006G201300 Sobic006G201300 Sobic010G202100 Sobic010G202100 Sobic006G201300--Sobic010G202100 Sobic001G140600 Sobic001G140600 Sobic006G201300--Sobic001G140600 Sobic003G047200 Sobic003G047200 Sobic006G201300--Sobic003G047200 Sobic009G025400 Sobic009G025400 Sobic006G201300--Sobic009G025400 Sobic005G168400 Sobic005G168400 Sobic006G201300--Sobic005G168400 Sobic010G234800 Sobic010G234800 Sobic006G201300--Sobic010G234800 Sobic010G215300 Sobic010G215300 Sobic006G201300--Sobic010G215300 Sobic004G271300 Sobic004G271300 Sobic006G201300--Sobic004G271300 Sobic002G313000 Sobic002G313000 Sobic006G201300--Sobic002G313000 Sobic010G202100--Sobic010G215300 Sobic010G202100--Sobic010G234800 Sobic001G098900 Sobic001G098900 Sobic010G202100--Sobic001G098900 Sobic007G017700 Sobic007G017700 Sobic010G202100--Sobic007G017700 Sobic003G414400 Sobic003G414400 Sobic010G202100--Sobic003G414400 Sobic010G202100--Sobic009G025400 Sobic010G202100--Sobic003G047200 Sobic010G202100--Sobic006G201300 Sobic008G114500 Sobic008G114500 Sobic010G202100--Sobic008G114500 Sobic001G140600--Sobic002G313000 Sobic008G006800 Sobic008G006800 Sobic001G140600--Sobic008G006800 Sobic001G177900 Sobic001G177900 Sobic001G140600--Sobic001G177900 Sobic001G540900 Sobic001G540900 Sobic001G140600--Sobic001G540900 Sobic003G260700 Sobic003G260700 Sobic001G140600--Sobic003G260700 Sobic001G140600--Sobic004G271300 Sobic001G140600--Sobic010G215300 Sobic003G102000 Sobic003G102000 Sobic001G140600--Sobic003G102000 Sobic004G339500 Sobic004G339500 Sobic001G140600--Sobic004G339500 Sobic003G047200--Sobic010G234800 Sobic003G047200--Sobic001G098900 Sobic003G047200--Sobic010G215300 Sobic001G458900 Sobic001G458900 Sobic003G047200--Sobic001G458900 Sobic001G284900 Sobic001G284900 Sobic003G047200--Sobic001G284900 Sobic003G047200--Sobic003G414400 Sobic006G155900 Sobic006G155900 Sobic003G047200--Sobic006G155900 Sobic003G047200--Sobic010G202100 Sobic002G279300 Sobic002G279300 Sobic003G047200--Sobic002G279300 Sobic005G056800 Sobic005G056800 Sobic009G025400--Sobic005G056800 Sobic009G025400--Sobic010G202100 Sobic004G108400 Sobic004G108400 Sobic009G025400--Sobic004G108400 Sobic002G394200 Sobic002G394200 Sobic009G025400--Sobic002G394200 Sobic009G257900 Sobic009G257900 Sobic009G025400--Sobic009G257900 Sobic006G112800 Sobic006G112800 Sobic009G025400--Sobic006G112800 Sobic009G025400--Sobic003G414400 Sobic009G025400--Sobic001G284900 Sobic003G083500 Sobic003G083500 Sobic009G025400--Sobic003G083500 Sobic010G168700 Sobic010G168700 Sobic005G168400--Sobic010G168700 Sobic001G143400 Sobic001G143400 Sobic005G168400--Sobic001G143400 Sobic004G003700 Sobic004G003700 Sobic005G168400--Sobic004G003700 Sobic003G319900 Sobic003G319900 Sobic005G168400--Sobic003G319900 Sobic001G393200 Sobic001G393200 Sobic005G168400--Sobic001G393200 Sobic009G047500 Sobic009G047500 Sobic005G168400--Sobic009G047500 Sobic005G199700 Sobic005G199700 Sobic005G168400--Sobic005G199700 Sobic001G379900 Sobic001G379900 Sobic005G168400--Sobic001G379900 Sobic007G152300 Sobic007G152300 Sobic005G168400--Sobic007G152300 Sobic010G234800--Sobic001G098900 Sobic010G234800--Sobic010G215300 Sobic010G234800--Sobic010G202100 Sobic010G234800--Sobic003G047200 Sobic010G234800--Sobic008G114500 Sobic002G293800 Sobic002G293800 Sobic010G234800--Sobic002G293800 Sobic010G234800--Sobic007G017700 Sobic010G234800--Sobic003G414400 Sobic010G234800--Sobic001G140600 Sobic010G215300--Sobic001G098900 Sobic010G215300--Sobic010G234800 Sobic010G215300--Sobic003G414400 Sobic010G215300--Sobic010G202100 Sobic010G215300--Sobic001G140600 Sobic010G215300--Sobic003G047200 Sobic010G215300--Sobic008G114500 Sobic010G215300--Sobic001G540900 Sobic010G215300--Sobic001G284900 Sobic007G168900 Sobic007G168900 Sobic004G271300--Sobic007G168900 Sobic005G000500 Sobic005G000500 Sobic004G271300--Sobic005G000500 Sobic004G271300--Sobic003G260700 Sobic001G170800 Sobic001G170800 Sobic004G271300--Sobic001G170800 Sobic005G005700 Sobic005G005700 Sobic004G271300--Sobic005G005700 Sobic001G398400 Sobic001G398400 Sobic004G271300--Sobic001G398400 Sobic004G271300--Sobic008G006800 Sobic004G271300--Sobic001G177900 Sobic005G144600 Sobic005G144600 Sobic004G271300--Sobic005G144600 Sobic010G129700 Sobic010G129700 Sobic002G313000--Sobic010G129700 Sobic002G313000--Sobic003G260700 Sobic008G114900 Sobic008G114900 Sobic002G313000--Sobic008G114900 Sobic002G313000--Sobic008G006800 Sobic008G125700 Sobic008G125700 Sobic002G313000--Sobic008G125700 Sobic002G313000--Sobic001G140600 Sobic002G319300 Sobic002G319300 Sobic002G313000--Sobic002G319300 Sobic002G313000--Sobic001G170800 Sobic002G313000--Sobic001G398400
Octagon: transcription factors


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