Gene annotation
Transcriptome id Sobic.003G047200.1
Synonym Sb03g004110
Functional annotation expressed protein
UniProt C5XMT7
Pfam -
Panther DB PTHR33427 PTHR33427:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G15550 : -
RAP-DB (Rice) LOC_Os01g08150.1 : expressed protein
MaizeGDB (Corn) Zm00025a023207
Brachypodium KQK02981
Barley -
Wheat TraesCS3B02G144000 , TraesCS3B02G144000 , TraesCS3A02G123800 , TraesCS3D02G125400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G234800 expressed protein -
2 Sobic.001G098900 syntaxin-related protein, putative, expressed K08486: syntaxin 1B/2/3
3 Sobic.010G215300 cyclin-dependent kinase B2-1, putative, expressed K07760: cyclin-dependent kinase
4 Sobic.001G458900 targeting protein-related, putative, expressed -
5 Sobic.001G284900 expressed protein -
6 Sobic.003G414400 expressed protein -
7 Sobic.006G155900 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
8 Sobic.010G202100 expressed protein -
9 Sobic.002G279300 tetratricopeptide repeat domain containing protein, expressed -
10 Sobic.005G056800 FHA domain containing protein, putative, expressed -
11 Sobic.001G540900 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
12 Sobic.002G293800 expressed protein -
13 Sobic.001G140600 expressed protein -
14 Sobic.004G115600 HMG1/2, putative, expressed K09273: upstream-binding transcription factor
15 Sobic.001G494300 DNA topoisomerase 3 protein, putative, expressed K03165: DNA topoisomerase III
16 Sobic.007G162000 carboxyl-terminal peptidase, putative, expressed -
17 Sobic.006G201300 expressed protein -
18 Sobic.004G198200 expressed protein -
19 Sobic.001G070200 - -
20 Sobic.001G331100 expressed protein -


Gene co-expression network
sample Sobic003G047200 Sobic003G047200 Sobic010G234800 Sobic010G234800 Sobic003G047200--Sobic010G234800 Sobic001G098900 Sobic001G098900 Sobic003G047200--Sobic001G098900 Sobic010G215300 Sobic010G215300 Sobic003G047200--Sobic010G215300 Sobic001G458900 Sobic001G458900 Sobic003G047200--Sobic001G458900 Sobic001G284900 Sobic001G284900 Sobic003G047200--Sobic001G284900 Sobic003G414400 Sobic003G414400 Sobic003G047200--Sobic003G414400 Sobic006G155900 Sobic006G155900 Sobic003G047200--Sobic006G155900 Sobic010G202100 Sobic010G202100 Sobic003G047200--Sobic010G202100 Sobic002G279300 Sobic002G279300 Sobic003G047200--Sobic002G279300 Sobic010G234800--Sobic001G098900 Sobic010G234800--Sobic010G215300 Sobic010G234800--Sobic010G202100 Sobic010G234800--Sobic003G047200 Sobic008G114500 Sobic008G114500 Sobic010G234800--Sobic008G114500 Sobic002G293800 Sobic002G293800 Sobic010G234800--Sobic002G293800 Sobic007G017700 Sobic007G017700 Sobic010G234800--Sobic007G017700 Sobic010G234800--Sobic003G414400 Sobic001G140600 Sobic001G140600 Sobic010G234800--Sobic001G140600 Sobic001G098900--Sobic010G215300 Sobic001G098900--Sobic010G234800 Sobic001G098900--Sobic010G202100 Sobic001G244400 Sobic001G244400 Sobic001G098900--Sobic001G244400 Sobic001G098900--Sobic003G047200 Sobic001G098900--Sobic003G414400 Sobic001G098900--Sobic002G293800 Sobic001G098900--Sobic008G114500 Sobic001G098900--Sobic006G155900 Sobic010G215300--Sobic001G098900 Sobic010G215300--Sobic010G234800 Sobic010G215300--Sobic003G414400 Sobic010G215300--Sobic010G202100 Sobic010G215300--Sobic001G140600 Sobic010G215300--Sobic003G047200 Sobic010G215300--Sobic008G114500 Sobic001G540900 Sobic001G540900 Sobic010G215300--Sobic001G540900 Sobic010G215300--Sobic001G284900 Sobic001G458900--Sobic002G279300 Sobic001G458900--Sobic003G047200 Sobic001G458900--Sobic002G293800 Sobic001G458900--Sobic010G234800 Sobic004G115600 Sobic004G115600 Sobic001G458900--Sobic004G115600 Sobic001G458900--Sobic001G098900 Sobic001G458900--Sobic010G215300 Sobic001G458900--Sobic001G284900 Sobic001G077200 Sobic001G077200 Sobic001G458900--Sobic001G077200 Sobic001G284900--Sobic003G414400 Sobic005G056800 Sobic005G056800 Sobic001G284900--Sobic005G056800 Sobic001G284900--Sobic003G047200 Sobic001G284900--Sobic010G215300 Sobic004G271300 Sobic004G271300 Sobic001G284900--Sobic004G271300 Sobic009G025400 Sobic009G025400 Sobic001G284900--Sobic009G025400 Sobic001G427400 Sobic001G427400 Sobic001G284900--Sobic001G427400 Sobic010G017400 Sobic010G017400 Sobic001G284900--Sobic010G017400 Sobic001G284900--Sobic001G098900 Sobic003G414400--Sobic001G284900 Sobic003G414400--Sobic010G215300 Sobic003G414400--Sobic001G098900 Sobic003G414400--Sobic010G202100 Sobic003G414400--Sobic003G047200 Sobic003G414400--Sobic010G234800 Sobic003G414400--Sobic006G155900 Sobic001G070200 Sobic001G070200 Sobic003G414400--Sobic001G070200 Sobic003G414400--Sobic004G271300 Sobic009G190400 Sobic009G190400 Sobic006G155900--Sobic009G190400 Sobic004G198200 Sobic004G198200 Sobic006G155900--Sobic004G198200 Sobic003G040100 Sobic003G040100 Sobic006G155900--Sobic003G040100 Sobic001G494300 Sobic001G494300 Sobic006G155900--Sobic001G494300 Sobic008G020500 Sobic008G020500 Sobic006G155900--Sobic008G020500 Sobic006G155900--Sobic003G047200 Sobic006G155900--Sobic003G414400 Sobic006G155900--Sobic001G070200 Sobic001G331100 Sobic001G331100 Sobic006G155900--Sobic001G331100 Sobic010G202100--Sobic010G215300 Sobic010G202100--Sobic010G234800 Sobic010G202100--Sobic001G098900 Sobic010G202100--Sobic007G017700 Sobic010G202100--Sobic003G414400 Sobic010G202100--Sobic009G025400 Sobic010G202100--Sobic003G047200 Sobic006G201300 Sobic006G201300 Sobic010G202100--Sobic006G201300 Sobic010G202100--Sobic008G114500 Sobic002G279300--Sobic004G115600 Sobic002G279300--Sobic001G458900 Sobic002G279300--Sobic001G331100 Sobic002G279300--Sobic003G047200 Sobic003G300100 Sobic003G300100 Sobic002G279300--Sobic003G300100 Sobic002G279300--Sobic002G293800 Sobic002G279300--Sobic001G098900 Sobic002G279300--Sobic001G077200 Sobic002G279300--Sobic010G234800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.