Gene annotation
Transcriptome id Sobic.007G162000.1,Sobic.007G162000.2
Synonym Sb07g023510
Functional annotation carboxyl-terminal peptidase, putative, expressed
UniProt C5YND4 , C5YMQ3
Pfam PF14365 PF03080
Panther DB PTHR31589 PTHR31589:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G18460 : Protein of Unknown Function (DUF239)
RAP-DB (Rice) LOC_Os08g45170.1 : carboxyl-terminal peptidase, putative, expressed
MaizeGDB (Corn) Zm00025a048469 , Zm00025a005494
Brachypodium KQJ94713 , KQJ94712 , KQJ94711 , KQJ94714 , PNT66471 , PNT66470
Barley HORVU7Hr1G108240.12 , HORVU7Hr1G108240.10 , HORVU7Hr1G108240.11 , HORVU7Hr1G108240.8 , HORVU7Hr1G108240.9 , HORVU7Hr1G108240.1 , HORVU7Hr1G108240.2 , HORVU7Hr1G108240.3 , HORVU7Hr1G108240.4 , HORVU7Hr1G108240.5 , HORVU7Hr1G108240.6 , HORVU7Hr1G108240.7
Wheat TraesCS7A02G474000 , TraesCS7A02G474000 , TraesCS7A02G474000 , TraesCS7B02G375400 , TraesCS7B02G375400 , TraesCS7D02G460900 , TraesCS1A02G113900 , TraesCS1A02G113900
Populus PNS90051


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G202500 spotted leaf 11, putative, expressed -
2 Sobic.009G195600 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
3 Sobic.007G019600 expressed protein -
4 Sobic.003G047200 expressed protein -
5 Sobic.001G331100 expressed protein -
6 Sobic.002G035500 CIN-like (ClassII) Subclade 13 TCP(PubMedID : 21444336)@basic helix-loop-helix (bHLH) transcription factor(PubMedID : 23915383)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
7 Sobic.001G253900 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
8 Sobic.006G155900 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
9 Sobic.003G432000 expressed protein -
10 Sobic.005G129600 OsSCP63 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
11 Sobic.009G254400 polygalacturonase inhibitor 1 precursor, putative, expressed -
12 Sobic.003G406500 antifreeze glycoprotein, putative, expressed -
13 Sobic.009G203200 pectinesterase, putative, expressed K01051: pectinesterase
14 Sobic.001G540900 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
15 Sobic.004G113900 polygalacturonase, putative, expressed -
16 Sobic.009G163700 fasciclin-like arabinogalactan protein, putative, expressed -
17 Sobic.007G113900 reticulon domain containing protein, putative, expressed -
18 Sobic.009G257900 expressed protein -
19 Sobic.010G202100 expressed protein -
20 Sobic.004G115600 HMG1/2, putative, expressed K09273: upstream-binding transcription factor


Gene co-expression network
sample Sobic007G162000 Sobic007G162000 Sobic002G202500 Sobic002G202500 Sobic007G162000--Sobic002G202500 Sobic009G195600 Sobic009G195600 Sobic007G162000--Sobic009G195600 Sobic007G019600 Sobic007G019600 Sobic007G162000--Sobic007G019600 Sobic003G047200 Sobic003G047200 Sobic007G162000--Sobic003G047200 Sobic001G331100 Sobic001G331100 Sobic007G162000--Sobic001G331100 Sobic002G035500 Sobic002G035500 Sobic007G162000--Sobic002G035500 Sobic001G253900 Sobic001G253900 Sobic007G162000--Sobic001G253900 Sobic006G155900 Sobic006G155900 Sobic007G162000--Sobic006G155900 Sobic003G432000 Sobic003G432000 Sobic007G162000--Sobic003G432000 Sobic002G202500--Sobic007G162000 Sobic004G336700 Sobic004G336700 Sobic002G202500--Sobic004G336700 Sobic001G247700 Sobic001G247700 Sobic002G202500--Sobic001G247700 Sobic002G202500--Sobic009G195600 Sobic001G265300 Sobic001G265300 Sobic002G202500--Sobic001G265300 Sobic004G113900 Sobic004G113900 Sobic002G202500--Sobic004G113900 Sobic002G202500--Sobic007G019600 Sobic010G209800 Sobic010G209800 Sobic002G202500--Sobic010G209800 Sobic004G283800 Sobic004G283800 Sobic002G202500--Sobic004G283800 Sobic009G195600--Sobic007G162000 Sobic010G202100 Sobic010G202100 Sobic009G195600--Sobic010G202100 Sobic006G176400 Sobic006G176400 Sobic009G195600--Sobic006G176400 Sobic009G195600--Sobic007G019600 Sobic009G195600--Sobic003G047200 Sobic009G257900 Sobic009G257900 Sobic009G195600--Sobic009G257900 Sobic009G195600--Sobic002G202500 Sobic003G373900 Sobic003G373900 Sobic009G195600--Sobic003G373900 Sobic009G195600--Sobic002G035500 Sobic007G019600--Sobic002G035500 Sobic004G237300 Sobic004G237300 Sobic007G019600--Sobic004G237300 Sobic001G494300 Sobic001G494300 Sobic007G019600--Sobic001G494300 Sobic003G282600 Sobic003G282600 Sobic007G019600--Sobic003G282600 Sobic007G019600--Sobic006G155900 Sobic007G019600--Sobic007G162000 Sobic007G019600--Sobic010G202100 Sobic005G129600 Sobic005G129600 Sobic007G019600--Sobic005G129600 Sobic009G025400 Sobic009G025400 Sobic007G019600--Sobic009G025400 Sobic010G234800 Sobic010G234800 Sobic003G047200--Sobic010G234800 Sobic001G098900 Sobic001G098900 Sobic003G047200--Sobic001G098900 Sobic010G215300 Sobic010G215300 Sobic003G047200--Sobic010G215300 Sobic001G458900 Sobic001G458900 Sobic003G047200--Sobic001G458900 Sobic001G284900 Sobic001G284900 Sobic003G047200--Sobic001G284900 Sobic003G414400 Sobic003G414400 Sobic003G047200--Sobic003G414400 Sobic003G047200--Sobic006G155900 Sobic003G047200--Sobic010G202100 Sobic002G279300 Sobic002G279300 Sobic003G047200--Sobic002G279300 Sobic004G115600 Sobic004G115600 Sobic001G331100--Sobic004G115600 Sobic006G108000 Sobic006G108000 Sobic001G331100--Sobic006G108000 Sobic001G331100--Sobic002G279300 Sobic009G254400 Sobic009G254400 Sobic001G331100--Sobic009G254400 Sobic001G331100--Sobic006G155900 Sobic008G163800 Sobic008G163800 Sobic001G331100--Sobic008G163800 Sobic003G406500 Sobic003G406500 Sobic001G331100--Sobic003G406500 Sobic003G040100 Sobic003G040100 Sobic001G331100--Sobic003G040100 Sobic001G263500 Sobic001G263500 Sobic001G331100--Sobic001G263500 Sobic002G035500--Sobic007G019600 Sobic002G035500--Sobic005G129600 Sobic002G035500--Sobic004G113900 Sobic002G035500--Sobic010G209800 Sobic004G191600 Sobic004G191600 Sobic002G035500--Sobic004G191600 Sobic002G035500--Sobic003G282600 Sobic002G035500--Sobic009G257900 Sobic002G035500--Sobic004G237300 Sobic002G035500--Sobic007G162000 Sobic001G451800 Sobic001G451800 Sobic001G253900--Sobic001G451800 Sobic001G253900--Sobic007G162000 Sobic007G113900 Sobic007G113900 Sobic001G253900--Sobic007G113900 Sobic008G156900 Sobic008G156900 Sobic001G253900--Sobic008G156900 Sobic003G300100 Sobic003G300100 Sobic001G253900--Sobic003G300100 Sobic004G288500 Sobic004G288500 Sobic001G253900--Sobic004G288500 Sobic009G134000 Sobic009G134000 Sobic001G253900--Sobic009G134000 Sobic001G253900--Sobic002G202500 Sobic008G083300 Sobic008G083300 Sobic001G253900--Sobic008G083300 Sobic009G190400 Sobic009G190400 Sobic006G155900--Sobic009G190400 Sobic004G198200 Sobic004G198200 Sobic006G155900--Sobic004G198200 Sobic006G155900--Sobic003G040100 Sobic006G155900--Sobic001G494300 Sobic008G020500 Sobic008G020500 Sobic006G155900--Sobic008G020500 Sobic006G155900--Sobic003G047200 Sobic006G155900--Sobic003G414400 Sobic001G070200 Sobic001G070200 Sobic006G155900--Sobic001G070200 Sobic006G155900--Sobic001G331100 Sobic003G432000--Sobic004G113900 Sobic003G432000--Sobic005G129600 Sobic003G338200 Sobic003G338200 Sobic003G432000--Sobic003G338200 Sobic001G345200 Sobic001G345200 Sobic003G432000--Sobic001G345200 Sobic010G234900 Sobic010G234900 Sobic003G432000--Sobic010G234900 Sobic007G211200 Sobic007G211200 Sobic003G432000--Sobic007G211200 Sobic004G357000 Sobic004G357000 Sobic003G432000--Sobic004G357000 Sobic003G432000--Sobic001G247700 Sobic001G267800 Sobic001G267800 Sobic003G432000--Sobic001G267800
Octagon: transcription factors


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