Gene annotation
Transcriptome id Sobic.002G202500.1
Synonym Sb02g024740
Functional annotation spotted leaf 11, putative, expressed
UniProt C5XCU3
Pfam PF00514
Panther DB PTHR23315 PTHR23315:SF59
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G31890 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os09g25000.1 : spotted leaf 11, putative, expressed
MaizeGDB (Corn) Zm00025a046996
Brachypodium KQJ90247
Barley HORVU5Hr1G065470.3 , HORVU5Hr1G065470.2 , HORVU5Hr1G065470.1
Wheat TraesCS5A02G225800 , TraesCS5D02G233100 , TraesCS5B02G224300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G162000 carboxyl-terminal peptidase, putative, expressed -
2 Sobic.004G336700 helix-loop-helix DNA-binding domain containing protein, expressed -
3 Sobic.001G247700 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
4 Sobic.009G195600 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
5 Sobic.001G265300 acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
6 Sobic.004G113900 polygalacturonase, putative, expressed -
7 Sobic.007G019600 expressed protein -
8 Sobic.010G209800 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
9 Sobic.004G283800 dehydration response related protein, putative, expressed -
10 Sobic.004G357000 inactive receptor kinase At2g26730 precursor, putative, expressed -
11 Sobic.010G234900 armadillo/beta-catenin repeat family protein, putative, expressed -
12 Sobic.002G035500 CIN-like (ClassII) Subclade 13 TCP(PubMedID : 21444336)@basic helix-loop-helix (bHLH) transcription factor(PubMedID : 23915383)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
13 Sobic.005G129600 OsSCP63 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
14 Sobic.010G246500 glycosyl hydrolases family 16, putative, expressed -
15 Sobic.002G412400 heavy metal-associated domain containing protein, expressed -
16 Sobic.009G257900 expressed protein -
17 Sobic.003G083500 inactive receptor kinase At2g26730 precursor, putative, expressed -
18 Sobic.003G406500 antifreeze glycoprotein, putative, expressed -
19 Sobic.007G113900 reticulon domain containing protein, putative, expressed -
20 Sobic.003G432000 expressed protein -


Gene co-expression network
sample Sobic002G202500 Sobic002G202500 Sobic007G162000 Sobic007G162000 Sobic002G202500--Sobic007G162000 Sobic004G336700 Sobic004G336700 Sobic002G202500--Sobic004G336700 Sobic001G247700 Sobic001G247700 Sobic002G202500--Sobic001G247700 Sobic009G195600 Sobic009G195600 Sobic002G202500--Sobic009G195600 Sobic001G265300 Sobic001G265300 Sobic002G202500--Sobic001G265300 Sobic004G113900 Sobic004G113900 Sobic002G202500--Sobic004G113900 Sobic007G019600 Sobic007G019600 Sobic002G202500--Sobic007G019600 Sobic010G209800 Sobic010G209800 Sobic002G202500--Sobic010G209800 Sobic004G283800 Sobic004G283800 Sobic002G202500--Sobic004G283800 Sobic007G162000--Sobic002G202500 Sobic007G162000--Sobic009G195600 Sobic007G162000--Sobic007G019600 Sobic003G047200 Sobic003G047200 Sobic007G162000--Sobic003G047200 Sobic001G331100 Sobic001G331100 Sobic007G162000--Sobic001G331100 Sobic002G035500 Sobic002G035500 Sobic007G162000--Sobic002G035500 Sobic001G253900 Sobic001G253900 Sobic007G162000--Sobic001G253900 Sobic006G155900 Sobic006G155900 Sobic007G162000--Sobic006G155900 Sobic003G432000 Sobic003G432000 Sobic007G162000--Sobic003G432000 Sobic004G336700--Sobic002G202500 Sobic004G336700--Sobic001G265300 Sobic004G336700--Sobic010G209800 Sobic001G273100 Sobic001G273100 Sobic004G336700--Sobic001G273100 Sobic002G412400 Sobic002G412400 Sobic004G336700--Sobic002G412400 Sobic002G229800 Sobic002G229800 Sobic004G336700--Sobic002G229800 Sobic006G108000 Sobic006G108000 Sobic004G336700--Sobic006G108000 Sobic003G406500 Sobic003G406500 Sobic004G336700--Sobic003G406500 Sobic006G163600 Sobic006G163600 Sobic004G336700--Sobic006G163600 Sobic007G181100 Sobic007G181100 Sobic001G247700--Sobic007G181100 Sobic003G083500 Sobic003G083500 Sobic001G247700--Sobic003G083500 Sobic006G108100 Sobic006G108100 Sobic001G247700--Sobic006G108100 Sobic001G068800 Sobic001G068800 Sobic001G247700--Sobic001G068800 Sobic002G260600 Sobic002G260600 Sobic001G247700--Sobic002G260600 Sobic003G113500 Sobic003G113500 Sobic001G247700--Sobic003G113500 Sobic007G211200 Sobic007G211200 Sobic001G247700--Sobic007G211200 Sobic004G357000 Sobic004G357000 Sobic001G247700--Sobic004G357000 Sobic005G129600 Sobic005G129600 Sobic001G247700--Sobic005G129600 Sobic009G195600--Sobic007G162000 Sobic010G202100 Sobic010G202100 Sobic009G195600--Sobic010G202100 Sobic006G176400 Sobic006G176400 Sobic009G195600--Sobic006G176400 Sobic009G195600--Sobic007G019600 Sobic009G195600--Sobic003G047200 Sobic009G257900 Sobic009G257900 Sobic009G195600--Sobic009G257900 Sobic009G195600--Sobic002G202500 Sobic003G373900 Sobic003G373900 Sobic009G195600--Sobic003G373900 Sobic009G195600--Sobic002G035500 Sobic001G265300--Sobic003G083500 Sobic007G170100 Sobic007G170100 Sobic001G265300--Sobic007G170100 Sobic009G025400 Sobic009G025400 Sobic001G265300--Sobic009G025400 Sobic001G265300--Sobic004G336700 Sobic002G312300 Sobic002G312300 Sobic001G265300--Sobic002G312300 Sobic001G265300--Sobic001G247700 Sobic005G009600 Sobic005G009600 Sobic001G265300--Sobic005G009600 Sobic003G027100 Sobic003G027100 Sobic001G265300--Sobic003G027100 Sobic006G273600 Sobic006G273600 Sobic001G265300--Sobic006G273600 Sobic004G113900--Sobic005G129600 Sobic004G113900--Sobic003G432000 Sobic004G113900--Sobic002G035500 Sobic004G113900--Sobic009G257900 Sobic001G267800 Sobic001G267800 Sobic004G113900--Sobic001G267800 Sobic004G113900--Sobic002G260600 Sobic004G113900--Sobic007G211200 Sobic004G113900--Sobic001G247700 Sobic004G115700 Sobic004G115700 Sobic004G113900--Sobic004G115700 Sobic007G019600--Sobic002G035500 Sobic004G237300 Sobic004G237300 Sobic007G019600--Sobic004G237300 Sobic001G494300 Sobic001G494300 Sobic007G019600--Sobic001G494300 Sobic003G282600 Sobic003G282600 Sobic007G019600--Sobic003G282600 Sobic007G019600--Sobic006G155900 Sobic007G019600--Sobic007G162000 Sobic007G019600--Sobic010G202100 Sobic007G019600--Sobic005G129600 Sobic007G019600--Sobic009G025400 Sobic010G209800--Sobic002G035500 Sobic010G209800--Sobic003G406500 Sobic007G153300 Sobic007G153300 Sobic010G209800--Sobic007G153300 Sobic010G234900 Sobic010G234900 Sobic010G209800--Sobic010G234900 Sobic010G209800--Sobic004G336700 Sobic003G359200 Sobic003G359200 Sobic010G209800--Sobic003G359200 Sobic010G209800--Sobic001G494300 Sobic010G209800--Sobic002G202500 Sobic007G038000 Sobic007G038000 Sobic010G209800--Sobic007G038000 Sobic001G207600 Sobic001G207600 Sobic004G283800--Sobic001G207600 Sobic004G274600 Sobic004G274600 Sobic004G283800--Sobic004G274600 Sobic003G339600 Sobic003G339600 Sobic004G283800--Sobic003G339600 Sobic002G229700 Sobic002G229700 Sobic004G283800--Sobic002G229700 Sobic003G070600 Sobic003G070600 Sobic004G283800--Sobic003G070600 Sobic010G020600 Sobic010G020600 Sobic004G283800--Sobic010G020600 Sobic009G235700 Sobic009G235700 Sobic004G283800--Sobic009G235700 Sobic004G283800--Sobic004G357000 Sobic004G283800--Sobic003G113500
Octagon: transcription factors


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