Gene annotation
Transcriptome id Sobic.002G412400.1
Synonym Sb02g042510
Functional annotation heavy metal-associated domain containing protein, expressed
UniProt A0A1W0W7W6
Pfam PF00403
Panther DB PTHR22814 PTHR22814:SF75
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G27690 : Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os07g47480.2 : heavy metal-associated domain containing protein, expressed
MaizeGDB (Corn) Zm00025a041039 , Zm00025a015405 , Zm00025a049120
Brachypodium KQK14710
Barley HORVU1Hr1G021620.7 , HORVU1Hr1G021620.4 , HORVU1Hr1G021620.5 , HORVU1Hr1G021620.2 , HORVU1Hr1G021620.3 , HORVU1Hr1G021620.1 , HORVU2Hr1G019950.2 , HORVU2Hr1G019950.3 , HORVU2Hr1G019950.4 , HORVU2Hr1G019950.6 , HORVU2Hr1G019950.5 , HORVU1Hr1G021620.8
Wheat TraesCS2D02G115700 , TraesCS1B02G119400 , TraesCS1A02G091600 , TraesCS2B02G134100
Populus -


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cDNA sequences
Sobic.002G412400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G325400 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
2 Sobic.002G202500 spotted leaf 11, putative, expressed -
3 Sobic.009G070500 uncharacterized protein At4g06744 precursor, putative, expressed -
4 Sobic.004G336700 helix-loop-helix DNA-binding domain containing protein, expressed -
5 Sobic.003G047200 expressed protein -
6 Sobic.009G195600 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
7 Sobic.001G273100 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
8 Sobic.010G246500 glycosyl hydrolases family 16, putative, expressed -
9 Sobic.007G000500 HMG1/2, putative, expressed -
10 Sobic.009G172000 FAR1 family protein, expressed -
11 Sobic.004G307800 "SGL1(Ortholog in rice:Nakagawa et al., 2012)"(PubMedID : 31659889)@expressed protein -
12 Sobic.001G265300 acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
13 Sobic.010G077000 "Upregulated in leave and stem in response to drouht stress, not expredded in roots"(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
14 Sobic.010G234800 expressed protein -
15 Sobic.006G270500 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.006G270400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@choline transporter-related, putative, expressed K15377: solute carrier family 44 (choline transporter-like protein), member 2/4/5
17 Sobic.001G541500 acidic leucine-rich nuclear phosphoprotein 32-related protein 1, putative, expressed -
18 Sobic.003G373900 universal stress protein domain containing protein, putative, expressed -
19 Sobic.009G146700 universal stress protein domain containing protein, putative, expressed -
20 Sobic.004G313200 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -


Gene co-expression network
sample Sobic002G412400 Sobic002G412400 Sobic003G325400 Sobic003G325400 Sobic002G412400--Sobic003G325400 Sobic002G202500 Sobic002G202500 Sobic002G412400--Sobic002G202500 Sobic009G070500 Sobic009G070500 Sobic002G412400--Sobic009G070500 Sobic004G336700 Sobic004G336700 Sobic002G412400--Sobic004G336700 Sobic003G047200 Sobic003G047200 Sobic002G412400--Sobic003G047200 Sobic009G195600 Sobic009G195600 Sobic002G412400--Sobic009G195600 Sobic001G273100 Sobic001G273100 Sobic002G412400--Sobic001G273100 Sobic010G246500 Sobic010G246500 Sobic002G412400--Sobic010G246500 Sobic007G000500 Sobic007G000500 Sobic002G412400--Sobic007G000500 Sobic003G325400--Sobic009G070500 Sobic001G470200 Sobic001G470200 Sobic003G325400--Sobic001G470200 Sobic003G325400--Sobic002G412400 Sobic001G199400 Sobic001G199400 Sobic003G325400--Sobic001G199400 Sobic001G083500 Sobic001G083500 Sobic003G325400--Sobic001G083500 Sobic001G074000 Sobic001G074000 Sobic003G325400--Sobic001G074000 Sobic007G165800 Sobic007G165800 Sobic003G325400--Sobic007G165800 Sobic008G008100 Sobic008G008100 Sobic003G325400--Sobic008G008100 Sobic001G493900 Sobic001G493900 Sobic003G325400--Sobic001G493900 Sobic007G162000 Sobic007G162000 Sobic002G202500--Sobic007G162000 Sobic002G202500--Sobic004G336700 Sobic001G247700 Sobic001G247700 Sobic002G202500--Sobic001G247700 Sobic002G202500--Sobic009G195600 Sobic001G265300 Sobic001G265300 Sobic002G202500--Sobic001G265300 Sobic004G113900 Sobic004G113900 Sobic002G202500--Sobic004G113900 Sobic007G019600 Sobic007G019600 Sobic002G202500--Sobic007G019600 Sobic010G209800 Sobic010G209800 Sobic002G202500--Sobic010G209800 Sobic004G283800 Sobic004G283800 Sobic002G202500--Sobic004G283800 Sobic009G070500--Sobic010G246500 Sobic010G077000 Sobic010G077000 Sobic009G070500--Sobic010G077000 Sobic003G338700 Sobic003G338700 Sobic009G070500--Sobic003G338700 Sobic009G070500--Sobic003G325400 Sobic009G146700 Sobic009G146700 Sobic009G070500--Sobic009G146700 Sobic003G373900 Sobic003G373900 Sobic009G070500--Sobic003G373900 Sobic010G070900 Sobic010G070900 Sobic009G070500--Sobic010G070900 Sobic003G239600 Sobic003G239600 Sobic009G070500--Sobic003G239600 Sobic005G199700 Sobic005G199700 Sobic009G070500--Sobic005G199700 Sobic004G336700--Sobic002G202500 Sobic004G336700--Sobic001G265300 Sobic004G336700--Sobic010G209800 Sobic004G336700--Sobic001G273100 Sobic004G336700--Sobic002G412400 Sobic002G229800 Sobic002G229800 Sobic004G336700--Sobic002G229800 Sobic006G108000 Sobic006G108000 Sobic004G336700--Sobic006G108000 Sobic003G406500 Sobic003G406500 Sobic004G336700--Sobic003G406500 Sobic006G163600 Sobic006G163600 Sobic004G336700--Sobic006G163600 Sobic010G234800 Sobic010G234800 Sobic003G047200--Sobic010G234800 Sobic001G098900 Sobic001G098900 Sobic003G047200--Sobic001G098900 Sobic010G215300 Sobic010G215300 Sobic003G047200--Sobic010G215300 Sobic001G458900 Sobic001G458900 Sobic003G047200--Sobic001G458900 Sobic001G284900 Sobic001G284900 Sobic003G047200--Sobic001G284900 Sobic003G414400 Sobic003G414400 Sobic003G047200--Sobic003G414400 Sobic006G155900 Sobic006G155900 Sobic003G047200--Sobic006G155900 Sobic010G202100 Sobic010G202100 Sobic003G047200--Sobic010G202100 Sobic002G279300 Sobic002G279300 Sobic003G047200--Sobic002G279300 Sobic009G195600--Sobic007G162000 Sobic009G195600--Sobic010G202100 Sobic006G176400 Sobic006G176400 Sobic009G195600--Sobic006G176400 Sobic009G195600--Sobic007G019600 Sobic009G195600--Sobic003G047200 Sobic009G257900 Sobic009G257900 Sobic009G195600--Sobic009G257900 Sobic009G195600--Sobic002G202500 Sobic009G195600--Sobic003G373900 Sobic002G035500 Sobic002G035500 Sobic009G195600--Sobic002G035500 Sobic006G177000 Sobic006G177000 Sobic001G273100--Sobic006G177000 Sobic001G273100--Sobic004G336700 Sobic010G191100 Sobic010G191100 Sobic001G273100--Sobic010G191100 Sobic001G534300 Sobic001G534300 Sobic001G273100--Sobic001G534300 Sobic001G273100--Sobic006G163600 Sobic001G273100--Sobic002G202500 Sobic001G273100--Sobic002G412400 Sobic001G273100--Sobic002G229800 Sobic001G273100--Sobic003G325400 Sobic010G246500--Sobic009G070500 Sobic010G246500--Sobic003G239600 Sobic006G228100 Sobic006G228100 Sobic010G246500--Sobic006G228100 Sobic002G312300 Sobic002G312300 Sobic010G246500--Sobic002G312300 Sobic003G298700 Sobic003G298700 Sobic010G246500--Sobic003G298700 Sobic008G137500 Sobic008G137500 Sobic010G246500--Sobic008G137500 Sobic010G078700 Sobic010G078700 Sobic010G246500--Sobic010G078700 Sobic002G194500 Sobic002G194500 Sobic010G246500--Sobic002G194500 Sobic010G246500--Sobic002G202500 Sobic007G000500--Sobic003G373900 Sobic001G540900 Sobic001G540900 Sobic007G000500--Sobic001G540900 Sobic005G020100 Sobic005G020100 Sobic007G000500--Sobic005G020100 Sobic004G313200 Sobic004G313200 Sobic007G000500--Sobic004G313200 Sobic007G116800 Sobic007G116800 Sobic007G000500--Sobic007G116800 Sobic003G085900 Sobic003G085900 Sobic007G000500--Sobic003G085900 Sobic002G272300 Sobic002G272300 Sobic007G000500--Sobic002G272300 Sobic010G269700 Sobic010G269700 Sobic007G000500--Sobic010G269700 Sobic004G257600 Sobic004G257600 Sobic007G000500--Sobic004G257600
Octagon: transcription factors


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