Gene annotation
Transcriptome id Sobic.009G172000.1,Sobic.009G172000.3,Sobic.009G172000.2
Synonym FRS5
Functional annotation FAR1 family protein, expressed
UniProt A0A1Z5R492 , Q9XEP8 , A0A1B6P950 , A0A1Z5R417
Pfam PF04434 PF03101 PF10551
Panther DB PTHR31669 PTHR31669:SF52
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0006355regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT4G38180 : FAR1-related sequence 5
RAP-DB (Rice) LOC_Os06g42520.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G170100 male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
2 Sobic.006G273600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.002G363300 - -
4 Sobic.006G117900 brevis radix, putative, expressed -
5 Sobic.005G009600 pectinesterase, putative, expressed K01051: pectinesterase
6 Sobic.006G005900 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
7 Sobic.009G023900 homeobox domain containing protein, expressed -
8 Sobic.003G027100 keratin, type I cytoskeletal 9, putative, expressed -
9 Sobic.004G274600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
10 Sobic.010G166300 expressed protein -
11 Sobic.004G346500 heavy metal-associated domain containing protein, expressed -
12 Sobic.010G235300 acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
13 Sobic.003G178500 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
14 Sobic.007G165800 SLG(Ortholog in rice:Feng et al. (2016))(PubMedID : 31659908)@transferase family protein, putative, expressed -
15 Sobic.004G211700 - -
16 Sobic.001G286700 homeobox and START domains containing protein, putative, expressed -
17 Sobic.003G010700 plant-specific domain TIGR01568 family protein, expressed -
18 Sobic.008G008100 kelch repeat-containing protein, putative, expressed -
19 Sobic.002G312300 SQUAMOSA promoter binding-like transcription factor(PubMedID : 27016024)@OsSPL13 - SBP-box gene family member, expressed -
20 Sobic.002G312200 Highest expression level in primordial inflorescence(PubMedID : 27501690)@"GLW7(Ortholog in rice:Si et al., 2016)"(PubMedID : 31659860)@SQUAMOSA promoter binding-like transcription factor(PubMedID : 27016024)@OsSPL13 - SBP-box gene family member, expressed -


Gene co-expression network
sample Sobic009G172000 Sobic009G172000 Sobic007G170100 Sobic007G170100 Sobic009G172000--Sobic007G170100 Sobic006G273600 Sobic006G273600 Sobic009G172000--Sobic006G273600 Sobic002G363300 Sobic002G363300 Sobic009G172000--Sobic002G363300 Sobic006G117900 Sobic006G117900 Sobic009G172000--Sobic006G117900 Sobic005G009600 Sobic005G009600 Sobic009G172000--Sobic005G009600 Sobic006G005900 Sobic006G005900 Sobic009G172000--Sobic006G005900 Sobic009G023900 Sobic009G023900 Sobic009G172000--Sobic009G023900 Sobic003G027100 Sobic003G027100 Sobic009G172000--Sobic003G027100 Sobic004G274600 Sobic004G274600 Sobic009G172000--Sobic004G274600 Sobic007G170100--Sobic006G273600 Sobic007G170100--Sobic005G009600 Sobic010G235300 Sobic010G235300 Sobic007G170100--Sobic010G235300 Sobic003G010700 Sobic003G010700 Sobic007G170100--Sobic003G010700 Sobic007G170100--Sobic002G363300 Sobic001G286700 Sobic001G286700 Sobic007G170100--Sobic001G286700 Sobic007G165800 Sobic007G165800 Sobic007G170100--Sobic007G165800 Sobic005G199700 Sobic005G199700 Sobic007G170100--Sobic005G199700 Sobic007G170100--Sobic003G027100 Sobic006G273600--Sobic007G170100 Sobic006G273600--Sobic005G009600 Sobic006G273600--Sobic002G363300 Sobic006G273600--Sobic003G010700 Sobic006G273600--Sobic010G235300 Sobic006G273600--Sobic001G286700 Sobic006G273600--Sobic005G199700 Sobic006G273600--Sobic003G027100 Sobic010G166300 Sobic010G166300 Sobic006G273600--Sobic010G166300 Sobic002G363300--Sobic006G273600 Sobic002G363300--Sobic005G199700 Sobic009G146700 Sobic009G146700 Sobic002G363300--Sobic009G146700 Sobic002G363300--Sobic003G010700 Sobic002G363300--Sobic003G027100 Sobic003G338700 Sobic003G338700 Sobic002G363300--Sobic003G338700 Sobic002G363300--Sobic001G286700 Sobic002G363300--Sobic005G009600 Sobic002G363300--Sobic007G170100 Sobic006G092300 Sobic006G092300 Sobic006G117900--Sobic006G092300 Sobic005G218000 Sobic005G218000 Sobic006G117900--Sobic005G218000 Sobic002G179200 Sobic002G179200 Sobic006G117900--Sobic002G179200 Sobic001G366000 Sobic001G366000 Sobic006G117900--Sobic001G366000 Sobic007G076100 Sobic007G076100 Sobic006G117900--Sobic007G076100 Sobic001G341700 Sobic001G341700 Sobic006G117900--Sobic001G341700 Sobic002G312200 Sobic002G312200 Sobic006G117900--Sobic002G312200 Sobic004G318800 Sobic004G318800 Sobic006G117900--Sobic004G318800 Sobic006G005800 Sobic006G005800 Sobic006G117900--Sobic006G005800 Sobic005G009600--Sobic006G273600 Sobic005G009600--Sobic010G166300 Sobic005G009600--Sobic007G170100 Sobic005G009600--Sobic009G023900 Sobic005G009600--Sobic010G235300 Sobic005G009600--Sobic002G363300 Sobic005G009600--Sobic001G286700 Sobic005G009600--Sobic003G027100 Sobic003G178500 Sobic003G178500 Sobic005G009600--Sobic003G178500 Sobic006G005900--Sobic006G005800 Sobic006G005900--Sobic009G023900 Sobic003G090650 Sobic003G090650 Sobic006G005900--Sobic003G090650 Sobic005G110900 Sobic005G110900 Sobic006G005900--Sobic005G110900 Sobic002G353100 Sobic002G353100 Sobic006G005900--Sobic002G353100 Sobic004G324500 Sobic004G324500 Sobic006G005900--Sobic004G324500 Sobic001G447800 Sobic001G447800 Sobic006G005900--Sobic001G447800 Sobic003G382400 Sobic003G382400 Sobic006G005900--Sobic003G382400 Sobic006G005900--Sobic005G218000 Sobic009G023900--Sobic010G166300 Sobic009G023900--Sobic003G178500 Sobic009G023900--Sobic005G009600 Sobic009G023900--Sobic005G218000 Sobic004G211700 Sobic004G211700 Sobic009G023900--Sobic004G211700 Sobic009G023900--Sobic007G076100 Sobic009G023900--Sobic001G341700 Sobic009G023900--Sobic002G312200 Sobic009G023900--Sobic006G005900 Sobic003G027100--Sobic003G178500 Sobic003G027100--Sobic002G363300 Sobic003G027100--Sobic001G286700 Sobic003G027100--Sobic010G235300 Sobic003G027100--Sobic004G211700 Sobic003G027100--Sobic010G166300 Sobic003G027100--Sobic007G165800 Sobic005G034500 Sobic005G034500 Sobic003G027100--Sobic005G034500 Sobic002G312300 Sobic002G312300 Sobic003G027100--Sobic002G312300 Sobic004G274600--Sobic007G165800 Sobic004G274600--Sobic004G211700 Sobic001G434100 Sobic001G434100 Sobic004G274600--Sobic001G434100 Sobic004G274600--Sobic001G286700 Sobic001G207600 Sobic001G207600 Sobic004G274600--Sobic001G207600 Sobic008G097700 Sobic008G097700 Sobic004G274600--Sobic008G097700 Sobic008G008100 Sobic008G008100 Sobic004G274600--Sobic008G008100 Sobic004G274600--Sobic003G027100 Sobic003G298700 Sobic003G298700 Sobic004G274600--Sobic003G298700
Octagon: transcription factors


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