Gene annotation
Transcriptome id Sobic.009G070500.1
Synonym Sb09g005930
Functional annotation uncharacterized protein At4g06744 precursor, putative, expressed
UniProt C5YUB5
Pfam PF08263 PF13855
Panther DB PTHR27000 PTHR27000:SF4
NCBI CDD KOG4579; Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G29240 : Leucine-rich repeat (LRR) family protein
RAP-DB (Rice) LOC_Os05g09640.1 : uncharacterized protein At4g06744 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a043081
Brachypodium KQK07141
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G246500 glycosyl hydrolases family 16, putative, expressed -
2 Sobic.010G077000 "Upregulated in leave and stem in response to drouht stress, not expredded in roots"(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
3 Sobic.003G338700 LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.003G325400 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
5 Sobic.009G146700 universal stress protein domain containing protein, putative, expressed -
6 Sobic.003G373900 universal stress protein domain containing protein, putative, expressed -
7 Sobic.010G070900 keratin, type I cytoskeletal 9, putative, expressed -
8 Sobic.003G239600 chloroplast unusual positioning protein, putative, expressed -
9 Sobic.005G199700 leucine-rich repeat family protein, putative, expressed -
10 Sobic.010G014500 aspartic protease, putative, expressed -
11 Sobic.010G014700 expressed protein -
12 Sobic.003G027100 keratin, type I cytoskeletal 9, putative, expressed -
13 Sobic.010G191100 helix-loop-helix DNA-binding, putative, expressed -
14 Sobic.004G343700 serine/threonine-protein kinase, putative, expressed -
15 Sobic.001G199400 monocopper oxidase, putative, expressed -
16 Sobic.003G298700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.007G165800 SLG(Ortholog in rice:Feng et al. (2016))(PubMedID : 31659908)@transferase family protein, putative, expressed -
18 Sobic.002G363300 - -
19 Sobic.006G107500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.001G299600 GATA zinc finger domain containing protein, expressed -


Gene co-expression network
sample Sobic009G070500 Sobic009G070500 Sobic010G246500 Sobic010G246500 Sobic009G070500--Sobic010G246500 Sobic010G077000 Sobic010G077000 Sobic009G070500--Sobic010G077000 Sobic003G338700 Sobic003G338700 Sobic009G070500--Sobic003G338700 Sobic003G325400 Sobic003G325400 Sobic009G070500--Sobic003G325400 Sobic009G146700 Sobic009G146700 Sobic009G070500--Sobic009G146700 Sobic003G373900 Sobic003G373900 Sobic009G070500--Sobic003G373900 Sobic010G070900 Sobic010G070900 Sobic009G070500--Sobic010G070900 Sobic003G239600 Sobic003G239600 Sobic009G070500--Sobic003G239600 Sobic005G199700 Sobic005G199700 Sobic009G070500--Sobic005G199700 Sobic010G246500--Sobic009G070500 Sobic010G246500--Sobic003G239600 Sobic006G228100 Sobic006G228100 Sobic010G246500--Sobic006G228100 Sobic002G312300 Sobic002G312300 Sobic010G246500--Sobic002G312300 Sobic003G298700 Sobic003G298700 Sobic010G246500--Sobic003G298700 Sobic008G137500 Sobic008G137500 Sobic010G246500--Sobic008G137500 Sobic010G078700 Sobic010G078700 Sobic010G246500--Sobic010G078700 Sobic002G194500 Sobic002G194500 Sobic010G246500--Sobic002G194500 Sobic002G202500 Sobic002G202500 Sobic010G246500--Sobic002G202500 Sobic010G077000--Sobic003G338700 Sobic010G014500 Sobic010G014500 Sobic010G077000--Sobic010G014500 Sobic003G019900 Sobic003G019900 Sobic010G077000--Sobic003G019900 Sobic004G003700 Sobic004G003700 Sobic010G077000--Sobic004G003700 Sobic006G163300 Sobic006G163300 Sobic010G077000--Sobic006G163300 Sobic001G379900 Sobic001G379900 Sobic010G077000--Sobic001G379900 Sobic001G493900 Sobic001G493900 Sobic010G077000--Sobic001G493900 Sobic003G010700 Sobic003G010700 Sobic010G077000--Sobic003G010700 Sobic007G147200 Sobic007G147200 Sobic010G077000--Sobic007G147200 Sobic003G338700--Sobic009G146700 Sobic003G338700--Sobic005G199700 Sobic003G338700--Sobic010G014500 Sobic010G014700 Sobic010G014700 Sobic003G338700--Sobic010G014700 Sobic002G363300 Sobic002G363300 Sobic003G338700--Sobic002G363300 Sobic001G286700 Sobic001G286700 Sobic003G338700--Sobic001G286700 Sobic007G180200 Sobic007G180200 Sobic003G338700--Sobic007G180200 Sobic001G199400 Sobic001G199400 Sobic003G338700--Sobic001G199400 Sobic003G338700--Sobic003G019900 Sobic003G325400--Sobic009G070500 Sobic001G470200 Sobic001G470200 Sobic003G325400--Sobic001G470200 Sobic002G412400 Sobic002G412400 Sobic003G325400--Sobic002G412400 Sobic003G325400--Sobic001G199400 Sobic001G083500 Sobic001G083500 Sobic003G325400--Sobic001G083500 Sobic001G074000 Sobic001G074000 Sobic003G325400--Sobic001G074000 Sobic007G165800 Sobic007G165800 Sobic003G325400--Sobic007G165800 Sobic008G008100 Sobic008G008100 Sobic003G325400--Sobic008G008100 Sobic003G325400--Sobic001G493900 Sobic009G146700--Sobic005G199700 Sobic009G146700--Sobic003G338700 Sobic009G146700--Sobic002G363300 Sobic009G146700--Sobic010G014700 Sobic009G146700--Sobic003G010700 Sobic009G146700--Sobic001G286700 Sobic009G146700--Sobic007G180200 Sobic006G107500 Sobic006G107500 Sobic009G146700--Sobic006G107500 Sobic009G146700--Sobic010G014500 Sobic004G343700 Sobic004G343700 Sobic003G373900--Sobic004G343700 Sobic007G000500 Sobic007G000500 Sobic003G373900--Sobic007G000500 Sobic010G269700 Sobic010G269700 Sobic003G373900--Sobic010G269700 Sobic003G373900--Sobic001G074000 Sobic006G274200 Sobic006G274200 Sobic003G373900--Sobic006G274200 Sobic004G313200 Sobic004G313200 Sobic003G373900--Sobic004G313200 Sobic003G373900--Sobic003G019900 Sobic001G540900 Sobic001G540900 Sobic003G373900--Sobic001G540900 Sobic004G246500 Sobic004G246500 Sobic003G373900--Sobic004G246500 Sobic010G070900--Sobic007G147200 Sobic002G360600 Sobic002G360600 Sobic010G070900--Sobic002G360600 Sobic003G046400 Sobic003G046400 Sobic010G070900--Sobic003G046400 Sobic010G070900--Sobic006G163300 Sobic010G070900--Sobic006G107500 Sobic002G426000 Sobic002G426000 Sobic010G070900--Sobic002G426000 Sobic007G033700 Sobic007G033700 Sobic010G070900--Sobic007G033700 Sobic010G168700 Sobic010G168700 Sobic010G070900--Sobic010G168700 Sobic001G143400 Sobic001G143400 Sobic010G070900--Sobic001G143400 Sobic003G239600--Sobic010G078700 Sobic003G239600--Sobic010G246500 Sobic003G239600--Sobic003G298700 Sobic003G239600--Sobic009G070500 Sobic003G239600--Sobic007G165800 Sobic003G239600--Sobic001G199400 Sobic006G058000 Sobic006G058000 Sobic003G239600--Sobic006G058000 Sobic003G239600--Sobic006G228100 Sobic003G239600--Sobic010G077000 Sobic005G199700--Sobic009G146700 Sobic005G199700--Sobic003G338700 Sobic005G199700--Sobic002G363300 Sobic005G199700--Sobic007G180200 Sobic005G199700--Sobic001G286700 Sobic006G273600 Sobic006G273600 Sobic005G199700--Sobic006G273600 Sobic005G199700--Sobic003G010700 Sobic003G027100 Sobic003G027100 Sobic005G199700--Sobic003G027100 Sobic005G199700--Sobic010G014700
Octagon: transcription factors


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