Gene annotation
Transcriptome id Sobic.003G325400.1
Synonym Sb03g037150
Functional annotation methyladenine glycosylase, putative, expressed
UniProt A0A1B6Q6L3
Pfam PF03352
Panther DB PTHR31116 PTHR31116:SF4
NCBI CDD -
KEGG Orthology K01246; DNA-3-methyladenine glycosylase I
Gene Ontology GO:0008725; DNA-3-methyladenine glycosylase activity GO:0006284base-excision repair


Orthologs (automatic annotation)
TAIR AT5G44680 : DNA glycosylase superfamily protein
RAP-DB (Rice) LOC_Os01g58550.1 : methyladenine glycosylase, putative, expressed
MaizeGDB (Corn) Zm00025a001811 , Zm00025a027197 , Zm00025a039851
Brachypodium KQK10176
Barley HORVU3Hr1G078260.2 , HORVU3Hr1G078260.3 , HORVU3Hr1G078260.1 , HORVU3Hr1G078260.6 , HORVU3Hr1G078260.4 , HORVU3Hr1G078260.5
Wheat TraesCS3A02G328700 , TraesCS3A02G328700 , TraesCS3B02G359100 , TraesCS3D02G322500
Populus -


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cDNA sequences
Sobic.003G325400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G070500 uncharacterized protein At4g06744 precursor, putative, expressed -
2 Sobic.001G470200 membrane associated DUF588 domain containing protein, putative, expressed -
3 Sobic.002G412400 heavy metal-associated domain containing protein, expressed -
4 Sobic.001G199400 monocopper oxidase, putative, expressed -
5 Sobic.001G083500 plastocyanin-like domain containing protein, putative, expressed -
6 Sobic.001G074000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
7 Sobic.007G165800 SLG(Ortholog in rice:Feng et al. (2016))(PubMedID : 31659908)@transferase family protein, putative, expressed -
8 Sobic.008G008100 kelch repeat-containing protein, putative, expressed -
9 Sobic.001G493900 beta-galactosidase, putative, expressed -
10 Sobic.010G077000 "Upregulated in leave and stem in response to drouht stress, not expredded in roots"(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
11 Sobic.004G274600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
12 Sobic.003G338700 LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.004G012700 remorin family protein, putative, expressed -
14 Sobic.004G357000 inactive receptor kinase At2g26730 precursor, putative, expressed -
15 Sobic.002G366000 X8 domain containing protein, expressed -
16 Sobic.007G197100 expressed protein -
17 Sobic.010G070900 keratin, type I cytoskeletal 9, putative, expressed -
18 Sobic.003G027100 keratin, type I cytoskeletal 9, putative, expressed -
19 Sobic.010G014700 expressed protein -
20 Sobic.002G430700 glycosyltransferase family 43 protein, putative, expressed -


Gene co-expression network
sample Sobic003G325400 Sobic003G325400 Sobic009G070500 Sobic009G070500 Sobic003G325400--Sobic009G070500 Sobic001G470200 Sobic001G470200 Sobic003G325400--Sobic001G470200 Sobic002G412400 Sobic002G412400 Sobic003G325400--Sobic002G412400 Sobic001G199400 Sobic001G199400 Sobic003G325400--Sobic001G199400 Sobic001G083500 Sobic001G083500 Sobic003G325400--Sobic001G083500 Sobic001G074000 Sobic001G074000 Sobic003G325400--Sobic001G074000 Sobic007G165800 Sobic007G165800 Sobic003G325400--Sobic007G165800 Sobic008G008100 Sobic008G008100 Sobic003G325400--Sobic008G008100 Sobic001G493900 Sobic001G493900 Sobic003G325400--Sobic001G493900 Sobic010G246500 Sobic010G246500 Sobic009G070500--Sobic010G246500 Sobic010G077000 Sobic010G077000 Sobic009G070500--Sobic010G077000 Sobic003G338700 Sobic003G338700 Sobic009G070500--Sobic003G338700 Sobic009G070500--Sobic003G325400 Sobic009G146700 Sobic009G146700 Sobic009G070500--Sobic009G146700 Sobic003G373900 Sobic003G373900 Sobic009G070500--Sobic003G373900 Sobic010G070900 Sobic010G070900 Sobic009G070500--Sobic010G070900 Sobic003G239600 Sobic003G239600 Sobic009G070500--Sobic003G239600 Sobic005G199700 Sobic005G199700 Sobic009G070500--Sobic005G199700 Sobic004G357000 Sobic004G357000 Sobic001G470200--Sobic004G357000 Sobic004G317200 Sobic004G317200 Sobic001G470200--Sobic004G317200 Sobic010G020600 Sobic010G020600 Sobic001G470200--Sobic010G020600 Sobic007G032100 Sobic007G032100 Sobic001G470200--Sobic007G032100 Sobic001G470200--Sobic007G165800 Sobic004G274600 Sobic004G274600 Sobic001G470200--Sobic004G274600 Sobic003G089300 Sobic003G089300 Sobic001G470200--Sobic003G089300 Sobic008G097700 Sobic008G097700 Sobic001G470200--Sobic008G097700 Sobic001G434100 Sobic001G434100 Sobic001G470200--Sobic001G434100 Sobic002G412400--Sobic003G325400 Sobic002G202500 Sobic002G202500 Sobic002G412400--Sobic002G202500 Sobic002G412400--Sobic009G070500 Sobic004G336700 Sobic004G336700 Sobic002G412400--Sobic004G336700 Sobic003G047200 Sobic003G047200 Sobic002G412400--Sobic003G047200 Sobic009G195600 Sobic009G195600 Sobic002G412400--Sobic009G195600 Sobic001G273100 Sobic001G273100 Sobic002G412400--Sobic001G273100 Sobic002G412400--Sobic010G246500 Sobic007G000500 Sobic007G000500 Sobic002G412400--Sobic007G000500 Sobic010G014700 Sobic010G014700 Sobic001G199400--Sobic010G014700 Sobic003G113500 Sobic003G113500 Sobic001G199400--Sobic003G113500 Sobic003G027100 Sobic003G027100 Sobic001G199400--Sobic003G027100 Sobic001G199400--Sobic003G338700 Sobic001G199400--Sobic007G165800 Sobic010G078700 Sobic010G078700 Sobic001G199400--Sobic010G078700 Sobic003G070600 Sobic003G070600 Sobic001G199400--Sobic003G070600 Sobic007G180200 Sobic007G180200 Sobic001G199400--Sobic007G180200 Sobic001G199400--Sobic001G074000 Sobic004G313200 Sobic004G313200 Sobic001G083500--Sobic004G313200 Sobic002G335900 Sobic002G335900 Sobic001G083500--Sobic002G335900 Sobic009G088700 Sobic009G088700 Sobic001G083500--Sobic009G088700 Sobic002G337600 Sobic002G337600 Sobic001G083500--Sobic002G337600 Sobic001G083500--Sobic001G074000 Sobic002G160800 Sobic002G160800 Sobic001G083500--Sobic002G160800 Sobic001G452900 Sobic001G452900 Sobic001G083500--Sobic001G452900 Sobic003G100700 Sobic003G100700 Sobic001G083500--Sobic003G100700 Sobic001G083500--Sobic001G199400 Sobic001G522300 Sobic001G522300 Sobic001G074000--Sobic001G522300 Sobic001G074000--Sobic003G070600 Sobic009G129700 Sobic009G129700 Sobic001G074000--Sobic009G129700 Sobic007G160300 Sobic007G160300 Sobic001G074000--Sobic007G160300 Sobic001G074000--Sobic001G199400 Sobic001G074000--Sobic001G493900 Sobic003G019900 Sobic003G019900 Sobic001G074000--Sobic003G019900 Sobic001G074000--Sobic010G014700 Sobic001G074000--Sobic010G020600 Sobic007G165800--Sobic004G274600 Sobic007G165800--Sobic001G434100 Sobic007G165800--Sobic007G180200 Sobic001G286700 Sobic001G286700 Sobic007G165800--Sobic001G286700 Sobic007G165800--Sobic003G027100 Sobic010G235300 Sobic010G235300 Sobic007G165800--Sobic010G235300 Sobic007G165800--Sobic001G199400 Sobic007G170100 Sobic007G170100 Sobic007G165800--Sobic007G170100 Sobic007G165800--Sobic003G338700 Sobic008G008100--Sobic004G274600 Sobic002G363300 Sobic002G363300 Sobic008G008100--Sobic002G363300 Sobic004G211700 Sobic004G211700 Sobic008G008100--Sobic004G211700 Sobic003G010700 Sobic003G010700 Sobic008G008100--Sobic003G010700 Sobic008G008100--Sobic001G286700 Sobic009G023900 Sobic009G023900 Sobic008G008100--Sobic009G023900 Sobic003G356600 Sobic003G356600 Sobic008G008100--Sobic003G356600 Sobic005G009600 Sobic005G009600 Sobic008G008100--Sobic005G009600 Sobic002G312200 Sobic002G312200 Sobic008G008100--Sobic002G312200 Sobic004G267600 Sobic004G267600 Sobic001G493900--Sobic004G267600 Sobic001G493900--Sobic003G019900 Sobic010G129700 Sobic010G129700 Sobic001G493900--Sobic010G129700 Sobic002G319300 Sobic002G319300 Sobic001G493900--Sobic002G319300 Sobic008G114900 Sobic008G114900 Sobic001G493900--Sobic008G114900 Sobic001G155700 Sobic001G155700 Sobic001G493900--Sobic001G155700 Sobic010G192500 Sobic010G192500 Sobic001G493900--Sobic010G192500 Sobic002G417000 Sobic002G417000 Sobic001G493900--Sobic002G417000 Sobic001G493900--Sobic003G338700
Octagon: transcription factors


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