Gene annotation
Transcriptome id Sobic.007G197100.1
Synonym Sb07g026550
Functional annotation expressed protein
UniProt A0A1Z5RBJ7
Pfam -
Panther DB PTHR35746 PTHR35746:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G14200 : Pentatricopeptide repeat (PPR) superfamily protein
RAP-DB (Rice) LOC_Os08g41400.1 : expressed protein
MaizeGDB (Corn) Zm00025a005217
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.007G197100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G366000 X8 domain containing protein, expressed -
2 Sobic.001G540700 expressed protein -
3 Sobic.009G254000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
4 Sobic.005G032600 glucan endo-1,3-beta-glucosidase-related, putative, expressed -
5 Sobic.009G005700 FYVE zinc finger domain containing protein, expressed -
6 Sobic.002G315500 ankyrin repeat domain containing protein, expressed -
7 Sobic.004G207000 fasciated ear2, putative, expressed -
8 Sobic.001G470200 membrane associated DUF588 domain containing protein, putative, expressed -
9 Sobic.006G272800 Most C2 domain protein(PubMedID : 29491869)@anthranilate phosphoribosyltransferase, putative, expressed -
10 Sobic.003G298900 1,3-beta-glucan synthase component, putative, expressed K11000: callose synthase
11 Sobic.004G052800 DUF640 domain containing protein, putative, expressed -
12 Sobic.004G041100 ATEXO70G1, putative, expressed K07195: EXOC7, exocyst complex component 7
13 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
14 Sobic.002G027600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
15 Sobic.001G079900 expressed protein -
16 Sobic.001G493900 beta-galactosidase, putative, expressed -
17 Sobic.002G284100 ATROPGEF7/ROPGEF7, putative, expressed -
18 Sobic.003G360700 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
19 Sobic.001G425200 expressed protein -
20 Sobic.003G302000 expressed protein -


Gene co-expression network
sample Sobic007G197100 Sobic007G197100 Sobic002G366000 Sobic002G366000 Sobic007G197100--Sobic002G366000 Sobic001G540700 Sobic001G540700 Sobic007G197100--Sobic001G540700 Sobic009G254000 Sobic009G254000 Sobic007G197100--Sobic009G254000 Sobic005G032600 Sobic005G032600 Sobic007G197100--Sobic005G032600 Sobic009G005700 Sobic009G005700 Sobic007G197100--Sobic009G005700 Sobic002G315500 Sobic002G315500 Sobic007G197100--Sobic002G315500 Sobic004G207000 Sobic004G207000 Sobic007G197100--Sobic004G207000 Sobic001G470200 Sobic001G470200 Sobic007G197100--Sobic001G470200 Sobic006G272800 Sobic006G272800 Sobic007G197100--Sobic006G272800 Sobic002G366000--Sobic007G197100 Sobic002G366000--Sobic002G315500 Sobic002G366000--Sobic009G254000 Sobic002G366000--Sobic001G470200 Sobic006G066400 Sobic006G066400 Sobic002G366000--Sobic006G066400 Sobic001G093000 Sobic001G093000 Sobic002G366000--Sobic001G093000 Sobic002G366000--Sobic005G032600 Sobic001G468000 Sobic001G468000 Sobic002G366000--Sobic001G468000 Sobic002G366000--Sobic001G540700 Sobic002G284100 Sobic002G284100 Sobic001G540700--Sobic002G284100 Sobic001G540700--Sobic007G197100 Sobic001G540700--Sobic004G207000 Sobic004G267600 Sobic004G267600 Sobic001G540700--Sobic004G267600 Sobic004G315700 Sobic004G315700 Sobic001G540700--Sobic004G315700 Sobic001G540700--Sobic006G272800 Sobic001G487200 Sobic001G487200 Sobic001G540700--Sobic001G487200 Sobic001G369800 Sobic001G369800 Sobic001G540700--Sobic001G369800 Sobic003G345000 Sobic003G345000 Sobic001G540700--Sobic003G345000 Sobic006G140300 Sobic006G140300 Sobic009G254000--Sobic006G140300 Sobic009G254000--Sobic007G197100 Sobic003G298900 Sobic003G298900 Sobic009G254000--Sobic003G298900 Sobic009G254000--Sobic002G366000 Sobic009G254000--Sobic001G540700 Sobic003G224700 Sobic003G224700 Sobic009G254000--Sobic003G224700 Sobic002G006100 Sobic002G006100 Sobic009G254000--Sobic002G006100 Sobic004G250600 Sobic004G250600 Sobic009G254000--Sobic004G250600 Sobic005G013300 Sobic005G013300 Sobic009G254000--Sobic005G013300 Sobic002G027600 Sobic002G027600 Sobic005G032600--Sobic002G027600 Sobic005G032600--Sobic004G267600 Sobic001G079900 Sobic001G079900 Sobic005G032600--Sobic001G079900 Sobic003G019900 Sobic003G019900 Sobic005G032600--Sobic003G019900 Sobic005G032600--Sobic006G272800 Sobic001G493900 Sobic001G493900 Sobic005G032600--Sobic001G493900 Sobic008G151600 Sobic008G151600 Sobic005G032600--Sobic008G151600 Sobic003G351900 Sobic003G351900 Sobic005G032600--Sobic003G351900 Sobic007G032100 Sobic007G032100 Sobic005G032600--Sobic007G032100 Sobic009G005700--Sobic007G197100 Sobic009G005700--Sobic003G298900 Sobic009G005700--Sobic001G540700 Sobic009G202801 Sobic009G202801 Sobic009G005700--Sobic009G202801 Sobic009G212100 Sobic009G212100 Sobic009G005700--Sobic009G212100 Sobic001G026800 Sobic001G026800 Sobic009G005700--Sobic001G026800 Sobic006G254500 Sobic006G254500 Sobic009G005700--Sobic006G254500 Sobic003G409600 Sobic003G409600 Sobic009G005700--Sobic003G409600 Sobic002G074000 Sobic002G074000 Sobic009G005700--Sobic002G074000 Sobic002G315500--Sobic001G470200 Sobic008G097700 Sobic008G097700 Sobic002G315500--Sobic008G097700 Sobic010G192500 Sobic010G192500 Sobic002G315500--Sobic010G192500 Sobic010G275800 Sobic010G275800 Sobic002G315500--Sobic010G275800 Sobic003G089300 Sobic003G089300 Sobic002G315500--Sobic003G089300 Sobic001G046400 Sobic001G046400 Sobic002G315500--Sobic001G046400 Sobic002G337600 Sobic002G337600 Sobic002G315500--Sobic002G337600 Sobic002G315500--Sobic001G093000 Sobic002G404300 Sobic002G404300 Sobic002G315500--Sobic002G404300 Sobic006G022400 Sobic006G022400 Sobic004G207000--Sobic006G022400 Sobic004G207000--Sobic001G540700 Sobic007G125700 Sobic007G125700 Sobic004G207000--Sobic007G125700 Sobic009G006900 Sobic009G006900 Sobic004G207000--Sobic009G006900 Sobic002G302600 Sobic002G302600 Sobic004G207000--Sobic002G302600 Sobic004G149400 Sobic004G149400 Sobic004G207000--Sobic004G149400 Sobic004G207000--Sobic005G032600 Sobic010G149600 Sobic010G149600 Sobic004G207000--Sobic010G149600 Sobic009G031500 Sobic009G031500 Sobic004G207000--Sobic009G031500 Sobic004G357000 Sobic004G357000 Sobic001G470200--Sobic004G357000 Sobic004G317200 Sobic004G317200 Sobic001G470200--Sobic004G317200 Sobic010G020600 Sobic010G020600 Sobic001G470200--Sobic010G020600 Sobic001G470200--Sobic007G032100 Sobic007G165800 Sobic007G165800 Sobic001G470200--Sobic007G165800 Sobic004G274600 Sobic004G274600 Sobic001G470200--Sobic004G274600 Sobic001G470200--Sobic003G089300 Sobic001G470200--Sobic008G097700 Sobic001G434100 Sobic001G434100 Sobic001G470200--Sobic001G434100 Sobic006G272800--Sobic002G284100 Sobic006G272800--Sobic002G027600 Sobic006G272800--Sobic004G267600 Sobic008G070700 Sobic008G070700 Sobic006G272800--Sobic008G070700 Sobic006G272800--Sobic005G032600 Sobic006G272800--Sobic001G468000 Sobic006G272800--Sobic002G006100 Sobic006G142500 Sobic006G142500 Sobic006G272800--Sobic006G142500 Sobic001G158300 Sobic001G158300 Sobic006G272800--Sobic001G158300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.