Gene annotation
Transcriptome id Sobic.003G360700.1
Synonym Sb03g040260, GPAT6, ATGPAT6
Functional annotation glycerol-3-phosphate acyltransferase, putative, expressed
UniProt Q8W0S3 , C5XQF6
Pfam PF01553
Panther DB PTHR15486 PTHR15486:SF20
NCBI CDD -
KEGG Orthology K13508; glycerol-3-phosphate acyltransferase
Gene Ontology GO:0016746; transferase activity, transferring acyl groups GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT2G38110 : glycerol-3-phosphate acyltransferase 6
RAP-DB (Rice) LOC_Os01g63580.1 : glycerol-3-phosphate acyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a028322 , Zm00025a008905 , Zm00025a038631 , Zm00025a037201 , Zm00025a026813 , Zm00025a025460
Brachypodium KQK10635
Barley HORVU3Hr1G056830.3 , HORVU3Hr1G056830.2 , HORVU3Hr1G056830.1 , HORVU3Hr1G056830.4 , HORVU3Hr1G084990.2 , HORVU3Hr1G084990.1 , HORVU1Hr1G073340.2 , HORVU1Hr1G073340.3 , HORVU1Hr1G073340.1 , HORVU1Hr1G073340.4
Wheat TraesCS3D02G225300 , TraesCS1B02G287900 , TraesCSU02G069100 , TraesCS3D02G361300 , TraesCS1D02G278000 , TraesCS3A02G368400 , TraesCS4D02G065400 , TraesCS3D02G333200 , TraesCS3A02G339700 , TraesCS3B02G257000 , TraesCS1A02G278700 , TraesCS3B02G400000 , TraesCS4B02G066500 , TraesCS3A02G227400 , TraesCS4D02G143600
Populus -


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cDNA sequences
Sobic.003G360700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G235700 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
2 Sobic.001G221900 3-ketoacyl-CoA synthase precursor, putative, expressed K15397: 3-ketoacyl-CoA synthase
3 Sobic.009G172700 expressed protein -
4 Sobic.001G074000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
5 Sobic.002G419200 inactive receptor kinase At2g26730 precursor, putative, expressed -
6 Sobic.004G274600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
7 Sobic.001G522300 leucine-rich repeat transmembrane protein kinase, putative, expressed -
8 Sobic.004G283800 dehydration response related protein, putative, expressed -
9 Sobic.010G020600 Receptor-like protein kinase 5 precursor(PubMedID : 28620409)@receptor-like protein kinase 5 precursor, putative, expressed -
10 Sobic.007G165800 SLG(Ortholog in rice:Feng et al. (2016))(PubMedID : 31659908)@transferase family protein, putative, expressed -
11 Sobic.007G163400 protein Kinase-like protein TMKL1 precursor, putative, expressed -
12 Sobic.001G113800 receptor protein kinase TMK1 precursor, putative, expressed -
13 Sobic.008G097700 transmembrane amino acid transporter protein, putative, expressed -
14 Sobic.001G093000 transferase family protein, putative, expressed -
15 Sobic.006G125800 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
16 Sobic.009G129700 serine/threonine-protein kinase, putative, expressed -
17 Sobic.001G207600 white-brown complex homolog protein 11, putative, expressed -
18 Sobic.001G470200 membrane associated DUF588 domain containing protein, putative, expressed -
19 Sobic.003G339600 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
20 Sobic.003G070600 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed -


Gene co-expression network
sample Sobic003G360700 Sobic003G360700 Sobic009G235700 Sobic009G235700 Sobic003G360700--Sobic009G235700 Sobic001G221900 Sobic001G221900 Sobic003G360700--Sobic001G221900 Sobic009G172700 Sobic009G172700 Sobic003G360700--Sobic009G172700 Sobic001G074000 Sobic001G074000 Sobic003G360700--Sobic001G074000 Sobic002G419200 Sobic002G419200 Sobic003G360700--Sobic002G419200 Sobic004G274600 Sobic004G274600 Sobic003G360700--Sobic004G274600 Sobic001G522300 Sobic001G522300 Sobic003G360700--Sobic001G522300 Sobic004G283800 Sobic004G283800 Sobic003G360700--Sobic004G283800 Sobic010G020600 Sobic010G020600 Sobic003G360700--Sobic010G020600 Sobic006G125800 Sobic006G125800 Sobic009G235700--Sobic006G125800 Sobic009G235700--Sobic010G020600 Sobic009G235700--Sobic001G221900 Sobic004G248100 Sobic004G248100 Sobic009G235700--Sobic004G248100 Sobic003G339600 Sobic003G339600 Sobic009G235700--Sobic003G339600 Sobic009G235700--Sobic001G522300 Sobic007G165800 Sobic007G165800 Sobic009G235700--Sobic007G165800 Sobic009G235700--Sobic004G283800 Sobic009G235700--Sobic003G360700 Sobic003G070600 Sobic003G070600 Sobic001G221900--Sobic003G070600 Sobic001G221900--Sobic009G235700 Sobic001G221900--Sobic010G020600 Sobic010G078700 Sobic010G078700 Sobic001G221900--Sobic010G078700 Sobic001G221900--Sobic003G339600 Sobic001G199400 Sobic001G199400 Sobic001G221900--Sobic001G199400 Sobic001G221900--Sobic004G248100 Sobic001G221900--Sobic001G074000 Sobic003G113500 Sobic003G113500 Sobic001G221900--Sobic003G113500 Sobic009G172700--Sobic002G419200 Sobic007G180200 Sobic007G180200 Sobic009G172700--Sobic007G180200 Sobic009G172700--Sobic003G360700 Sobic009G172700--Sobic007G165800 Sobic007G163400 Sobic007G163400 Sobic009G172700--Sobic007G163400 Sobic001G488900 Sobic001G488900 Sobic009G172700--Sobic001G488900 Sobic008G097700 Sobic008G097700 Sobic009G172700--Sobic008G097700 Sobic001G285200 Sobic001G285200 Sobic009G172700--Sobic001G285200 Sobic010G010900 Sobic010G010900 Sobic009G172700--Sobic010G010900 Sobic001G074000--Sobic001G522300 Sobic001G074000--Sobic003G070600 Sobic009G129700 Sobic009G129700 Sobic001G074000--Sobic009G129700 Sobic007G160300 Sobic007G160300 Sobic001G074000--Sobic007G160300 Sobic001G074000--Sobic001G199400 Sobic001G493900 Sobic001G493900 Sobic001G074000--Sobic001G493900 Sobic003G019900 Sobic003G019900 Sobic001G074000--Sobic003G019900 Sobic010G014700 Sobic010G014700 Sobic001G074000--Sobic010G014700 Sobic001G074000--Sobic010G020600 Sobic003G300400 Sobic003G300400 Sobic002G419200--Sobic003G300400 Sobic003G338200 Sobic003G338200 Sobic002G419200--Sobic003G338200 Sobic003G116100 Sobic003G116100 Sobic002G419200--Sobic003G116100 Sobic003G309400 Sobic003G309400 Sobic002G419200--Sobic003G309400 Sobic003G277200 Sobic003G277200 Sobic002G419200--Sobic003G277200 Sobic002G419200--Sobic001G285200 Sobic002G032500 Sobic002G032500 Sobic002G419200--Sobic002G032500 Sobic002G419200--Sobic004G248100 Sobic002G419200--Sobic003G339600 Sobic004G274600--Sobic007G165800 Sobic004G211700 Sobic004G211700 Sobic004G274600--Sobic004G211700 Sobic001G434100 Sobic001G434100 Sobic004G274600--Sobic001G434100 Sobic001G286700 Sobic001G286700 Sobic004G274600--Sobic001G286700 Sobic001G207600 Sobic001G207600 Sobic004G274600--Sobic001G207600 Sobic004G274600--Sobic008G097700 Sobic008G008100 Sobic008G008100 Sobic004G274600--Sobic008G008100 Sobic003G027100 Sobic003G027100 Sobic004G274600--Sobic003G027100 Sobic003G298700 Sobic003G298700 Sobic004G274600--Sobic003G298700 Sobic001G522300--Sobic001G074000 Sobic007G116800 Sobic007G116800 Sobic001G522300--Sobic007G116800 Sobic001G522300--Sobic001G493900 Sobic003G031700 Sobic003G031700 Sobic001G522300--Sobic003G031700 Sobic002G362700 Sobic002G362700 Sobic001G522300--Sobic002G362700 Sobic001G286400 Sobic001G286400 Sobic001G522300--Sobic001G286400 Sobic001G522300--Sobic009G235700 Sobic001G522300--Sobic009G129700 Sobic001G522300--Sobic004G283800 Sobic004G283800--Sobic001G207600 Sobic004G283800--Sobic004G274600 Sobic004G283800--Sobic003G339600 Sobic002G229700 Sobic002G229700 Sobic004G283800--Sobic002G229700 Sobic004G283800--Sobic003G070600 Sobic004G283800--Sobic010G020600 Sobic004G283800--Sobic009G235700 Sobic004G357000 Sobic004G357000 Sobic004G283800--Sobic004G357000 Sobic004G283800--Sobic003G113500 Sobic004G317200 Sobic004G317200 Sobic010G020600--Sobic004G317200 Sobic010G020600--Sobic004G248100 Sobic010G020600--Sobic003G339600 Sobic010G020600--Sobic003G070600 Sobic010G020600--Sobic009G235700 Sobic010G020600--Sobic007G160300 Sobic003G018700 Sobic003G018700 Sobic010G020600--Sobic003G018700 Sobic010G020600--Sobic008G097700 Sobic010G020600--Sobic001G221900
Octagon: transcription factors


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