Gene annotation
Transcriptome id Sobic.009G005700.1
Synonym Sb09g000710
Functional annotation FYVE zinc finger domain containing protein, expressed
UniProt C5YY28
Pfam PF01363 PF13713 PF08381 PF00415
Panther DB PTHR22870 PTHR22870:SF199
NCBI CDD KOG1427; Uncharacterized conserved protein, contains RCC1 domain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G42140 : Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
RAP-DB (Rice) LOC_Os01g73410.1 : FYVE zinc finger domain containing protein, expressed
MaizeGDB (Corn) Zm00025a040980
Brachypodium KQK08100
Barley HORVU1Hr1G002740.2 , HORVU1Hr1G002740.3 , HORVU1Hr1G002740.1 , HORVU1Hr1G002740.4 , HORVU3Hr1G112690.5 , HORVU3Hr1G112690.1 , HORVU3Hr1G112690.2 , HORVU3Hr1G112690.3
Wheat TraesCS3D02G522600 , TraesCS3B02G581600 , TraesCS3B02G581600 , TraesCS3B02G581600 , TraesCS3D02G522600 , TraesCS1D02G019900 , TraesCS1A02G020400 , TraesCS1B02G024400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G197100 expressed protein -
2 Sobic.003G298900 1,3-beta-glucan synthase component, putative, expressed K11000: callose synthase
3 Sobic.001G540700 expressed protein -
4 Sobic.009G202801 - K10406: kinesin family member C2/C3
5 Sobic.009G212100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
6 Sobic.001G026800 polygalacturonase, putative, expressed -
7 Sobic.006G254500 IQ calmodulin-binding motif family protein, putative, expressed -
8 Sobic.003G409600 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
9 Sobic.002G074000 expressed protein -
10 Sobic.001G425200 expressed protein -
11 Sobic.002G160800 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.005G055600 myosin heavy chain-related, putative, expressed -
13 Sobic.006G272500 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@expressed protein -
14 Sobic.004G041100 ATEXO70G1, putative, expressed K07195: EXOC7, exocyst complex component 7
15 Sobic.002G293700 ATXR, putative, expressed -
16 Sobic.004G093400 beta-galactosidase precursor, putative, expressed -
17 Sobic.003G095500 glycosyltransferase, putative, expressed -
18 Sobic.004G306100 expressed protein -
19 Sobic.001G369800 monocopper oxidase, putative, expressed -
20 Sobic.007G072100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBL44 - F-box domain and LRR containing protein, expressed -


Gene co-expression network
sample Sobic009G005700 Sobic009G005700 Sobic007G197100 Sobic007G197100 Sobic009G005700--Sobic007G197100 Sobic003G298900 Sobic003G298900 Sobic009G005700--Sobic003G298900 Sobic001G540700 Sobic001G540700 Sobic009G005700--Sobic001G540700 Sobic009G202801 Sobic009G202801 Sobic009G005700--Sobic009G202801 Sobic009G212100 Sobic009G212100 Sobic009G005700--Sobic009G212100 Sobic001G026800 Sobic001G026800 Sobic009G005700--Sobic001G026800 Sobic006G254500 Sobic006G254500 Sobic009G005700--Sobic006G254500 Sobic003G409600 Sobic003G409600 Sobic009G005700--Sobic003G409600 Sobic002G074000 Sobic002G074000 Sobic009G005700--Sobic002G074000 Sobic002G366000 Sobic002G366000 Sobic007G197100--Sobic002G366000 Sobic007G197100--Sobic001G540700 Sobic009G254000 Sobic009G254000 Sobic007G197100--Sobic009G254000 Sobic005G032600 Sobic005G032600 Sobic007G197100--Sobic005G032600 Sobic007G197100--Sobic009G005700 Sobic002G315500 Sobic002G315500 Sobic007G197100--Sobic002G315500 Sobic004G207000 Sobic004G207000 Sobic007G197100--Sobic004G207000 Sobic001G470200 Sobic001G470200 Sobic007G197100--Sobic001G470200 Sobic006G272800 Sobic006G272800 Sobic007G197100--Sobic006G272800 Sobic002G006100 Sobic002G006100 Sobic003G298900--Sobic002G006100 Sobic003G298900--Sobic001G540700 Sobic001G123100 Sobic001G123100 Sobic003G298900--Sobic001G123100 Sobic003G298900--Sobic009G254000 Sobic003G298900--Sobic009G005700 Sobic005G064100 Sobic005G064100 Sobic003G298900--Sobic005G064100 Sobic002G253900 Sobic002G253900 Sobic003G298900--Sobic002G253900 Sobic003G411700 Sobic003G411700 Sobic003G298900--Sobic003G411700 Sobic003G298900--Sobic007G197100 Sobic002G284100 Sobic002G284100 Sobic001G540700--Sobic002G284100 Sobic001G540700--Sobic007G197100 Sobic001G540700--Sobic004G207000 Sobic004G267600 Sobic004G267600 Sobic001G540700--Sobic004G267600 Sobic004G315700 Sobic004G315700 Sobic001G540700--Sobic004G315700 Sobic001G540700--Sobic006G272800 Sobic001G487200 Sobic001G487200 Sobic001G540700--Sobic001G487200 Sobic001G369800 Sobic001G369800 Sobic001G540700--Sobic001G369800 Sobic003G345000 Sobic003G345000 Sobic001G540700--Sobic003G345000 Sobic003G292700 Sobic003G292700 Sobic009G202801--Sobic003G292700 Sobic006G193100 Sobic006G193100 Sobic009G202801--Sobic006G193100 Sobic003G031700 Sobic003G031700 Sobic009G202801--Sobic003G031700 Sobic003G315700 Sobic003G315700 Sobic009G202801--Sobic003G315700 Sobic006G142500 Sobic006G142500 Sobic009G202801--Sobic006G142500 Sobic001G008300 Sobic001G008300 Sobic009G202801--Sobic001G008300 Sobic009G202801--Sobic002G074000 Sobic002G317700 Sobic002G317700 Sobic009G202801--Sobic002G317700 Sobic004G246500 Sobic004G246500 Sobic009G202801--Sobic004G246500 Sobic009G212100--Sobic001G487200 Sobic009G212100--Sobic004G315700 Sobic001G296800 Sobic001G296800 Sobic009G212100--Sobic001G296800 Sobic003G226700 Sobic003G226700 Sobic009G212100--Sobic003G226700 Sobic007G084200 Sobic007G084200 Sobic009G212100--Sobic007G084200 Sobic006G267500 Sobic006G267500 Sobic009G212100--Sobic006G267500 Sobic006G084300 Sobic006G084300 Sobic009G212100--Sobic006G084300 Sobic009G212100--Sobic001G369800 Sobic009G212100--Sobic006G254500 Sobic002G404300 Sobic002G404300 Sobic001G026800--Sobic002G404300 Sobic001G026800--Sobic001G008300 Sobic009G175100 Sobic009G175100 Sobic001G026800--Sobic009G175100 Sobic001G026800--Sobic003G315700 Sobic001G026800--Sobic006G193100 Sobic001G026800--Sobic003G409600 Sobic001G026800--Sobic002G074000 Sobic003G336900 Sobic003G336900 Sobic001G026800--Sobic003G336900 Sobic001G026800--Sobic003G031700 Sobic006G254500--Sobic006G267500 Sobic006G254500--Sobic009G212100 Sobic006G254500--Sobic004G315700 Sobic002G393200 Sobic002G393200 Sobic006G254500--Sobic002G393200 Sobic007G166800 Sobic007G166800 Sobic006G254500--Sobic007G166800 Sobic001G285200 Sobic001G285200 Sobic006G254500--Sobic001G285200 Sobic003G077500 Sobic003G077500 Sobic006G254500--Sobic003G077500 Sobic006G254500--Sobic001G487200 Sobic009G206500 Sobic009G206500 Sobic006G254500--Sobic009G206500 Sobic004G306100 Sobic004G306100 Sobic003G409600--Sobic004G306100 Sobic003G409600--Sobic003G315700 Sobic007G219100 Sobic007G219100 Sobic003G409600--Sobic007G219100 Sobic002G271400 Sobic002G271400 Sobic003G409600--Sobic002G271400 Sobic006G127200 Sobic006G127200 Sobic003G409600--Sobic006G127200 Sobic003G409600--Sobic009G202801 Sobic010G103500 Sobic010G103500 Sobic003G409600--Sobic010G103500 Sobic003G409600--Sobic003G411700 Sobic010G052400 Sobic010G052400 Sobic003G409600--Sobic010G052400 Sobic003G307200 Sobic003G307200 Sobic002G074000--Sobic003G307200 Sobic002G417000 Sobic002G417000 Sobic002G074000--Sobic002G417000 Sobic007G087800 Sobic007G087800 Sobic002G074000--Sobic007G087800 Sobic002G074000--Sobic004G267600 Sobic001G493900 Sobic001G493900 Sobic002G074000--Sobic001G493900 Sobic002G074000--Sobic001G008300 Sobic002G074000--Sobic009G202801 Sobic010G129700 Sobic010G129700 Sobic002G074000--Sobic010G129700 Sobic005G055600 Sobic005G055600 Sobic002G074000--Sobic005G055600
Octagon: transcription factors


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