Gene annotation
Transcriptome id Sobic.007G072100.2,Sobic.007G072100.1
Synonym Sb07g005730
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
OsFBL44 - F-box domain and LRR containing protein, expressed
UniProt C5YIG1 , A0A1Z5R8F2
Pfam PF00646
Panther DB PTHR32212 PTHR32212:SF103
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G32375 : F-box/RNI-like/FBD-like domains-containing protein
RAP-DB (Rice) LOC_Os08g09750.1 : OsFBL44 - F-box domain and LRR containing protein, expressed
MaizeGDB (Corn) -
Brachypodium PNT66618
Barley HORVU7Hr1G018720.10 , HORVU7Hr1G018720.15 , HORVU7Hr1G018720.14 , HORVU7Hr1G018720.16 , HORVU7Hr1G018720.11 , HORVU7Hr1G018720.13 , HORVU7Hr1G018720.12 , HORVU7Hr1G018720.1 , HORVU7Hr1G018720.3 , HORVU7Hr1G018720.2 , HORVU7Hr1G018720.5 , HORVU7Hr1G018720.4 , HORVU7Hr1G018720.7 , HORVU7Hr1G018720.6 , HORVU7Hr1G018720.9 , HORVU7Hr1G018720.8
Wheat TraesCS2B02G142200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G411700 heat shock protein DnaJ, putative, expressed -
2 Sobic.003G343200 outer membrane protein, OMP85 family protein, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
3 Sobic.002G253900 growth regulator related protein, putative, expressed -
4 Sobic.003G298900 1,3-beta-glucan synthase component, putative, expressed K11000: callose synthase
5 Sobic.004G306100 expressed protein -
6 Sobic.001G033300 expansin precursor, putative, expressed -
7 Sobic.002G271400 RNA recognition motif containing protein, putative, expressed -
8 Sobic.004G014100 sialyltransferase family domain containing protein, expressed -
9 Sobic.001G425200 expressed protein -
10 Sobic.004G145300 OsFBD12 - F-box and FBD domain containing protein, expressed -
11 Sobic.002G343000 expressed protein -
12 Sobic.006G184200 zinc RING finger protein, putative, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
13 Sobic.007G167800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dihydroxy-acid dehydratase, putative, expressed K01687: dihydroxy-acid dehydratase
14 Sobic.004G129500 expressed protein -
15 Sobic.003G113900 zinc finger matrin-type protein 5, putative, expressed K13152: U11/U12 small nuclear ribonucleoprotein 20 kDa protein
16 Sobic.009G212100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
17 Sobic.003G409600 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
18 Sobic.009G005700 FYVE zinc finger domain containing protein, expressed -
19 Sobic.006G200901 - -
20 Sobic.004G050300 FAD dependent oxidoreductase domain containing protein, expressed -


Gene co-expression network
sample Sobic007G072100 Sobic007G072100 Sobic003G411700 Sobic003G411700 Sobic007G072100--Sobic003G411700 Sobic003G343200 Sobic003G343200 Sobic007G072100--Sobic003G343200 Sobic002G253900 Sobic002G253900 Sobic007G072100--Sobic002G253900 Sobic003G298900 Sobic003G298900 Sobic007G072100--Sobic003G298900 Sobic004G306100 Sobic004G306100 Sobic007G072100--Sobic004G306100 Sobic001G033300 Sobic001G033300 Sobic007G072100--Sobic001G033300 Sobic002G271400 Sobic002G271400 Sobic007G072100--Sobic002G271400 Sobic004G014100 Sobic004G014100 Sobic007G072100--Sobic004G014100 Sobic001G425200 Sobic001G425200 Sobic007G072100--Sobic001G425200 Sobic010G222800 Sobic010G222800 Sobic003G411700--Sobic010G222800 Sobic003G411700--Sobic004G306100 Sobic003G411700--Sobic002G271400 Sobic010G103500 Sobic010G103500 Sobic003G411700--Sobic010G103500 Sobic003G411700--Sobic001G425200 Sobic003G411700--Sobic003G343200 Sobic001G212600 Sobic001G212600 Sobic003G411700--Sobic001G212600 Sobic010G024000 Sobic010G024000 Sobic003G411700--Sobic010G024000 Sobic005G160200 Sobic005G160200 Sobic003G411700--Sobic005G160200 Sobic003G343200--Sobic010G222800 Sobic010G257500 Sobic010G257500 Sobic003G343200--Sobic010G257500 Sobic003G343200--Sobic002G271400 Sobic001G534400 Sobic001G534400 Sobic003G343200--Sobic001G534400 Sobic003G343200--Sobic003G411700 Sobic003G343200--Sobic004G014100 Sobic003G289700 Sobic003G289700 Sobic003G343200--Sobic003G289700 Sobic003G343200--Sobic004G306100 Sobic003G343200--Sobic010G024000 Sobic009G148000 Sobic009G148000 Sobic002G253900--Sobic009G148000 Sobic001G123100 Sobic001G123100 Sobic002G253900--Sobic001G123100 Sobic006G200901 Sobic006G200901 Sobic002G253900--Sobic006G200901 Sobic002G343000 Sobic002G343000 Sobic002G253900--Sobic002G343000 Sobic001G005800 Sobic001G005800 Sobic002G253900--Sobic001G005800 Sobic001G540700 Sobic001G540700 Sobic002G253900--Sobic001G540700 Sobic006G218900 Sobic006G218900 Sobic002G253900--Sobic006G218900 Sobic002G284100 Sobic002G284100 Sobic002G253900--Sobic002G284100 Sobic002G006100 Sobic002G006100 Sobic002G253900--Sobic002G006100 Sobic003G298900--Sobic002G006100 Sobic003G298900--Sobic001G540700 Sobic003G298900--Sobic001G123100 Sobic009G254000 Sobic009G254000 Sobic003G298900--Sobic009G254000 Sobic009G005700 Sobic009G005700 Sobic003G298900--Sobic009G005700 Sobic005G064100 Sobic005G064100 Sobic003G298900--Sobic005G064100 Sobic003G298900--Sobic002G253900 Sobic003G298900--Sobic003G411700 Sobic007G197100 Sobic007G197100 Sobic003G298900--Sobic007G197100 Sobic004G306100--Sobic002G271400 Sobic004G306100--Sobic010G103500 Sobic004G306100--Sobic003G411700 Sobic003G315700 Sobic003G315700 Sobic004G306100--Sobic003G315700 Sobic006G127200 Sobic006G127200 Sobic004G306100--Sobic006G127200 Sobic003G409600 Sobic003G409600 Sobic004G306100--Sobic003G409600 Sobic002G260700 Sobic002G260700 Sobic004G306100--Sobic002G260700 Sobic002G123600 Sobic002G123600 Sobic004G306100--Sobic002G123600 Sobic010G052400 Sobic010G052400 Sobic004G306100--Sobic010G052400 Sobic001G033300--Sobic003G343200 Sobic007G018500 Sobic007G018500 Sobic001G033300--Sobic007G018500 Sobic001G033300--Sobic003G411700 Sobic001G033300--Sobic007G072100 Sobic001G033300--Sobic004G014100 Sobic001G033300--Sobic002G271400 Sobic001G033300--Sobic010G222800 Sobic006G236800 Sobic006G236800 Sobic001G033300--Sobic006G236800 Sobic001G033300--Sobic010G257500 Sobic002G271400--Sobic004G306100 Sobic002G271400--Sobic003G343200 Sobic002G271400--Sobic006G127200 Sobic002G271400--Sobic003G411700 Sobic001G025900 Sobic001G025900 Sobic002G271400--Sobic001G025900 Sobic002G271400--Sobic010G222800 Sobic003G013800 Sobic003G013800 Sobic002G271400--Sobic003G013800 Sobic008G004900 Sobic008G004900 Sobic002G271400--Sobic008G004900 Sobic002G271400--Sobic010G024000 Sobic004G014100--Sobic002G343000 Sobic004G014100--Sobic006G200901 Sobic004G014100--Sobic005G160200 Sobic006G143300 Sobic006G143300 Sobic004G014100--Sobic006G143300 Sobic004G014100--Sobic003G343200 Sobic002G349000 Sobic002G349000 Sobic004G014100--Sobic002G349000 Sobic002G230400 Sobic002G230400 Sobic004G014100--Sobic002G230400 Sobic002G354800 Sobic002G354800 Sobic004G014100--Sobic002G354800 Sobic006G140300 Sobic006G140300 Sobic004G014100--Sobic006G140300 Sobic001G425200--Sobic003G411700 Sobic004G041100 Sobic004G041100 Sobic001G425200--Sobic004G041100 Sobic001G425200--Sobic010G103500 Sobic001G425200--Sobic001G212600 Sobic001G425200--Sobic002G271400 Sobic001G425200--Sobic004G306100 Sobic003G336900 Sobic003G336900 Sobic001G425200--Sobic003G336900 Sobic001G425200--Sobic005G160200 Sobic001G425200--Sobic003G298900
Octagon: transcription factors


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