Gene annotation
Transcriptome id Sobic.001G033300.1
Synonym ATEXPA4, ATEXP4, Sb01g003120, ATHEXPALPHA1.6, EXPA4
Functional annotation expansin precursor, putative, expressed
UniProt C5WV02
Pfam PF03330 PF01357
Panther DB PTHR31867 PTHR31867:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G39700 : expansin A4
RAP-DB (Rice) LOC_Os03g60720.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a027043 , Zm00025a043994 , Zm00025a008818 , Zm00025a033209 , Zm00025a006817 , Zm00025a040298 , Zm00025a040299 , Zm00025a040297 , Zm00025a016421 , Zm00025a022026
Brachypodium KQJ96856 , KQJ96855 , KQK23578 , KQK23579 , KQK10365 , KQK05753 , KQK12421
Barley HORVU1Hr1G069830.2 , HORVU1Hr1G069830.1 , HORVU1Hr1G069830.7 , HORVU1Hr1G069830.6 , HORVU1Hr1G069830.5 , HORVU1Hr1G069830.4 , HORVU3Hr1G081180.4 , HORVU3Hr1G081180.3 , HORVU3Hr1G081180.2 , HORVU3Hr1G081180.1 , HORVU5Hr1G113580.5 , HORVU3Hr1G081230.9 , HORVU3Hr1G081230.8 , HORVU3Hr1G081230.5 , HORVU3Hr1G081230.3 , HORVU3Hr1G081230.2 , HORVU5Hr1G113580.4 , HORVU3Hr1G075210.1 , HORVU3Hr1G075210.2 , HORVU2Hr1G010800.1 , HORVU5Hr1G113580.6 , HORVU5Hr1G113580.1 , HORVU5Hr1G113580.3 , HORVU5Hr1G113580.2
Wheat TraesCS3D02G338400 , TraesCS4B02G272600 , TraesCS4B02G271200 , TraesCS4A02G339200 , TraesCS5D02G494800 , TraesCS5A02G481200 , TraesCS4D02G271800 , TraesCS3B02G376800 , TraesCS1D02G299700 , TraesCS2B02G078800 , TraesCS2A02G066600 , TraesCS5D02G527700 , TraesCS1A02G300200 , TraesCS1A02G300200 , TraesCS4D02G271900 , TraesCS4A02G034300 , TraesCS1B02G310300 , TraesCS2D02G065000 , TraesCS6B02G336500 , TraesCS4D02G271700 , TraesCS5D02G535500 , TraesCS7D02G387400 , TraesCS7D02G387400 , TraesCS3A02G344800 , TraesCS4D02G270400 , TraesCS5B02G494400 , TraesCS3B02G376900 , TraesCS3D02G338600 , TraesCS4B02G272700
Populus PNT19309 , PNT19310


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cDNA sequences
Sobic.001G033300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G343200 outer membrane protein, OMP85 family protein, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
2 Sobic.007G018500 galactosyltransferase family protein, putative, expressed -
3 Sobic.003G411700 heat shock protein DnaJ, putative, expressed -
4 Sobic.007G072100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBL44 - F-box domain and LRR containing protein, expressed -
5 Sobic.004G014100 sialyltransferase family domain containing protein, expressed -
6 Sobic.002G271400 RNA recognition motif containing protein, putative, expressed -
7 Sobic.010G222800 expressed protein -
8 Sobic.006G236800 ATEB1A-like microtubule associated protein, putative, expressed K10436: microtubule-associated protein, RP/EB family
9 Sobic.010G257500 expressed protein -
10 Sobic.001G534400 - -
11 Sobic.003G282800 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed -
12 Sobic.009G202801 - K10406: kinesin family member C2/C3
13 Sobic.003G078400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase, putative, expressed -
14 Sobic.004G328300 expressed protein -
15 Sobic.010G024000 transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
16 Sobic.001G128200 RNA recognition motif containing protein, putative, expressed -
17 Sobic.009G156400 tubulin-specific chaperone E, putative, expressed -
18 Sobic.001G123100 Os3bglu8 - beta-glucosidase, exo-beta-glucansase, high similarity to Os3bglu7, expressed K05350: beta-glucosidase
19 Sobic.002G343000 expressed protein -
20 Sobic.004G306100 expressed protein -


Gene co-expression network
sample Sobic001G033300 Sobic001G033300 Sobic003G343200 Sobic003G343200 Sobic001G033300--Sobic003G343200 Sobic007G018500 Sobic007G018500 Sobic001G033300--Sobic007G018500 Sobic003G411700 Sobic003G411700 Sobic001G033300--Sobic003G411700 Sobic007G072100 Sobic007G072100 Sobic001G033300--Sobic007G072100 Sobic004G014100 Sobic004G014100 Sobic001G033300--Sobic004G014100 Sobic002G271400 Sobic002G271400 Sobic001G033300--Sobic002G271400 Sobic010G222800 Sobic010G222800 Sobic001G033300--Sobic010G222800 Sobic006G236800 Sobic006G236800 Sobic001G033300--Sobic006G236800 Sobic010G257500 Sobic010G257500 Sobic001G033300--Sobic010G257500 Sobic003G343200--Sobic010G222800 Sobic003G343200--Sobic010G257500 Sobic003G343200--Sobic002G271400 Sobic001G534400 Sobic001G534400 Sobic003G343200--Sobic001G534400 Sobic003G343200--Sobic003G411700 Sobic003G343200--Sobic004G014100 Sobic003G289700 Sobic003G289700 Sobic003G343200--Sobic003G289700 Sobic004G306100 Sobic004G306100 Sobic003G343200--Sobic004G306100 Sobic010G024000 Sobic010G024000 Sobic003G343200--Sobic010G024000 Sobic002G341700 Sobic002G341700 Sobic007G018500--Sobic002G341700 Sobic007G018500--Sobic001G033300 Sobic007G084200 Sobic007G084200 Sobic007G018500--Sobic007G084200 Sobic001G201000 Sobic001G201000 Sobic007G018500--Sobic001G201000 Sobic005G156100 Sobic005G156100 Sobic007G018500--Sobic005G156100 Sobic008G052000 Sobic008G052000 Sobic007G018500--Sobic008G052000 Sobic007G018500--Sobic006G236800 Sobic009G099150 Sobic009G099150 Sobic007G018500--Sobic009G099150 Sobic001G487200 Sobic001G487200 Sobic007G018500--Sobic001G487200 Sobic003G411700--Sobic010G222800 Sobic003G411700--Sobic004G306100 Sobic003G411700--Sobic002G271400 Sobic010G103500 Sobic010G103500 Sobic003G411700--Sobic010G103500 Sobic001G425200 Sobic001G425200 Sobic003G411700--Sobic001G425200 Sobic003G411700--Sobic003G343200 Sobic001G212600 Sobic001G212600 Sobic003G411700--Sobic001G212600 Sobic003G411700--Sobic010G024000 Sobic005G160200 Sobic005G160200 Sobic003G411700--Sobic005G160200 Sobic007G072100--Sobic003G411700 Sobic007G072100--Sobic003G343200 Sobic002G253900 Sobic002G253900 Sobic007G072100--Sobic002G253900 Sobic003G298900 Sobic003G298900 Sobic007G072100--Sobic003G298900 Sobic007G072100--Sobic004G306100 Sobic007G072100--Sobic001G033300 Sobic007G072100--Sobic002G271400 Sobic007G072100--Sobic004G014100 Sobic007G072100--Sobic001G425200 Sobic002G343000 Sobic002G343000 Sobic004G014100--Sobic002G343000 Sobic006G200901 Sobic006G200901 Sobic004G014100--Sobic006G200901 Sobic004G014100--Sobic005G160200 Sobic006G143300 Sobic006G143300 Sobic004G014100--Sobic006G143300 Sobic004G014100--Sobic003G343200 Sobic002G349000 Sobic002G349000 Sobic004G014100--Sobic002G349000 Sobic002G230400 Sobic002G230400 Sobic004G014100--Sobic002G230400 Sobic002G354800 Sobic002G354800 Sobic004G014100--Sobic002G354800 Sobic006G140300 Sobic006G140300 Sobic004G014100--Sobic006G140300 Sobic002G271400--Sobic004G306100 Sobic002G271400--Sobic003G343200 Sobic006G127200 Sobic006G127200 Sobic002G271400--Sobic006G127200 Sobic002G271400--Sobic003G411700 Sobic001G025900 Sobic001G025900 Sobic002G271400--Sobic001G025900 Sobic002G271400--Sobic010G222800 Sobic003G013800 Sobic003G013800 Sobic002G271400--Sobic003G013800 Sobic008G004900 Sobic008G004900 Sobic002G271400--Sobic008G004900 Sobic002G271400--Sobic010G024000 Sobic010G222800--Sobic003G343200 Sobic010G222800--Sobic010G024000 Sobic010G222800--Sobic003G411700 Sobic002G112000 Sobic002G112000 Sobic010G222800--Sobic002G112000 Sobic008G070700 Sobic008G070700 Sobic010G222800--Sobic008G070700 Sobic010G222800--Sobic002G271400 Sobic007G076200 Sobic007G076200 Sobic010G222800--Sobic007G076200 Sobic003G423800 Sobic003G423800 Sobic010G222800--Sobic003G423800 Sobic008G131900 Sobic008G131900 Sobic010G222800--Sobic008G131900 Sobic006G236800--Sobic001G025900 Sobic004G328300 Sobic004G328300 Sobic006G236800--Sobic004G328300 Sobic002G113400 Sobic002G113400 Sobic006G236800--Sobic002G113400 Sobic001G300400 Sobic001G300400 Sobic006G236800--Sobic001G300400 Sobic003G297200 Sobic003G297200 Sobic006G236800--Sobic003G297200 Sobic006G236800--Sobic002G271400 Sobic006G236800--Sobic007G084200 Sobic001G521100 Sobic001G521100 Sobic006G236800--Sobic001G521100 Sobic009G138300 Sobic009G138300 Sobic006G236800--Sobic009G138300 Sobic010G009600 Sobic010G009600 Sobic010G257500--Sobic010G009600 Sobic010G257500--Sobic003G343200 Sobic010G257500--Sobic001G534400 Sobic010G257500--Sobic006G127200 Sobic010G013400 Sobic010G013400 Sobic010G257500--Sobic010G013400 Sobic010G018900 Sobic010G018900 Sobic010G257500--Sobic010G018900 Sobic010G257500--Sobic002G271400 Sobic010G257500--Sobic004G014100 Sobic010G038900 Sobic010G038900 Sobic010G257500--Sobic010G038900
Octagon: transcription factors


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