Gene annotation
Transcriptome id Sobic.003G282800.1
Synonym
Functional annotation Complex I intermediate-associated protein 30 domain containing protein, putative, expressed
UniProt C5XIZ5
Pfam PF08547
Panther DB PTHR13194
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G17350 : NADH:ubiquinone oxidoreductase intermediate-associated protein 30
RAP-DB (Rice) LOC_Os01g52720.1 : Complex I intermediate-associated protein 30 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a039006
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G033300 expansin precursor, putative, expressed -
2 Sobic.002G220700 GS9(Ortholog in rice:Zhao et al.(2018))(PubMedID : 31659855)@expressed protein -
3 Sobic.006G106600 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
4 Sobic.003G331000 exostosin family domain containing protein, expressed -
5 Sobic.001G242500 - -
6 Sobic.005G160200 sialyltransferase family domain containing protein, expressed -
7 Sobic.003G411700 heat shock protein DnaJ, putative, expressed -
8 Sobic.010G087100 MCM9 - Putative minichromosome maintenance MCM family subunit 9, expressed K10738: DNA helicase MCM9
9 Sobic.004G238801 - -
10 Sobic.010G222800 expressed protein -
11 Sobic.001G534400 - -
12 Sobic.006G106200 NAP domain containing protein, putative, expressed K11290: SET, TAF1, template-activating factor I
13 Sobic.008G090400 - -
14 Sobic.004G078500 Leucine Rich Repeat family protein, expressed -
15 Sobic.004G000400 OsPDIL1-4 protein disulfide isomerase PDIL1-4, expressed K09580: PDIA1, protein disulfide-isomerase A1
16 Sobic.006G093200 PHD finger protein, putative, expressed -
17 Sobic.004G014100 sialyltransferase family domain containing protein, expressed -
18 Sobic.001G506300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@xyloglucan galactosyltransferase KATAMARI1, putative, expressed -
19 Sobic.008G118100 kelch repeat protein, putative, expressed -
20 Sobic.010G257500 expressed protein -


Gene co-expression network
sample Sobic003G282800 Sobic003G282800 Sobic001G033300 Sobic001G033300 Sobic003G282800--Sobic001G033300 Sobic002G220700 Sobic002G220700 Sobic003G282800--Sobic002G220700 Sobic006G106600 Sobic006G106600 Sobic003G282800--Sobic006G106600 Sobic003G331000 Sobic003G331000 Sobic003G282800--Sobic003G331000 Sobic001G242500 Sobic001G242500 Sobic003G282800--Sobic001G242500 Sobic005G160200 Sobic005G160200 Sobic003G282800--Sobic005G160200 Sobic003G411700 Sobic003G411700 Sobic003G282800--Sobic003G411700 Sobic010G087100 Sobic010G087100 Sobic003G282800--Sobic010G087100 Sobic004G238801 Sobic004G238801 Sobic003G282800--Sobic004G238801 Sobic003G343200 Sobic003G343200 Sobic001G033300--Sobic003G343200 Sobic007G018500 Sobic007G018500 Sobic001G033300--Sobic007G018500 Sobic001G033300--Sobic003G411700 Sobic007G072100 Sobic007G072100 Sobic001G033300--Sobic007G072100 Sobic004G014100 Sobic004G014100 Sobic001G033300--Sobic004G014100 Sobic002G271400 Sobic002G271400 Sobic001G033300--Sobic002G271400 Sobic010G222800 Sobic010G222800 Sobic001G033300--Sobic010G222800 Sobic006G236800 Sobic006G236800 Sobic001G033300--Sobic006G236800 Sobic010G257500 Sobic010G257500 Sobic001G033300--Sobic010G257500 Sobic009G088700 Sobic009G088700 Sobic002G220700--Sobic009G088700 Sobic003G091550 Sobic003G091550 Sobic002G220700--Sobic003G091550 Sobic001G015700 Sobic001G015700 Sobic002G220700--Sobic001G015700 Sobic006G122300 Sobic006G122300 Sobic002G220700--Sobic006G122300 Sobic004G072900 Sobic004G072900 Sobic002G220700--Sobic004G072900 Sobic003G078400 Sobic003G078400 Sobic002G220700--Sobic003G078400 Sobic003G274000 Sobic003G274000 Sobic002G220700--Sobic003G274000 Sobic003G317700 Sobic003G317700 Sobic002G220700--Sobic003G317700 Sobic001G123300 Sobic001G123300 Sobic002G220700--Sobic001G123300 Sobic004G000400 Sobic004G000400 Sobic006G106600--Sobic004G000400 Sobic002G173400 Sobic002G173400 Sobic006G106600--Sobic002G173400 Sobic007G186400 Sobic007G186400 Sobic006G106600--Sobic007G186400 Sobic004G215600 Sobic004G215600 Sobic006G106600--Sobic004G215600 Sobic001G229300 Sobic001G229300 Sobic006G106600--Sobic001G229300 Sobic001G191900 Sobic001G191900 Sobic006G106600--Sobic001G191900 Sobic006G106600--Sobic002G271400 Sobic010G030000 Sobic010G030000 Sobic006G106600--Sobic010G030000 Sobic008G131900 Sobic008G131900 Sobic006G106600--Sobic008G131900 Sobic003G259600 Sobic003G259600 Sobic003G331000--Sobic003G259600 Sobic009G122900 Sobic009G122900 Sobic003G331000--Sobic009G122900 Sobic003G028400 Sobic003G028400 Sobic003G331000--Sobic003G028400 Sobic002G123600 Sobic002G123600 Sobic003G331000--Sobic002G123600 Sobic001G123600 Sobic001G123600 Sobic003G331000--Sobic001G123600 Sobic001G242300 Sobic001G242300 Sobic003G331000--Sobic001G242300 Sobic003G331000--Sobic005G160200 Sobic003G298900 Sobic003G298900 Sobic003G331000--Sobic003G298900 Sobic003G360300 Sobic003G360300 Sobic003G331000--Sobic003G360300 Sobic008G118100 Sobic008G118100 Sobic001G242500--Sobic008G118100 Sobic003G188600 Sobic003G188600 Sobic001G242500--Sobic003G188600 Sobic008G090400 Sobic008G090400 Sobic001G242500--Sobic008G090400 Sobic001G242500--Sobic010G087100 Sobic006G281900 Sobic006G281900 Sobic001G242500--Sobic006G281900 Sobic002G317700 Sobic002G317700 Sobic001G242500--Sobic002G317700 Sobic004G190500 Sobic004G190500 Sobic001G242500--Sobic004G190500 Sobic007G187700 Sobic007G187700 Sobic001G242500--Sobic007G187700 Sobic001G377700 Sobic001G377700 Sobic001G242500--Sobic001G377700 Sobic005G160200--Sobic004G014100 Sobic005G160200--Sobic003G411700 Sobic005G160200--Sobic003G343200 Sobic006G091850 Sobic006G091850 Sobic005G160200--Sobic006G091850 Sobic002G315100 Sobic002G315100 Sobic005G160200--Sobic002G315100 Sobic010G038900 Sobic010G038900 Sobic005G160200--Sobic010G038900 Sobic005G160200--Sobic010G257500 Sobic001G534400 Sobic001G534400 Sobic005G160200--Sobic001G534400 Sobic004G350200 Sobic004G350200 Sobic005G160200--Sobic004G350200 Sobic003G411700--Sobic010G222800 Sobic004G306100 Sobic004G306100 Sobic003G411700--Sobic004G306100 Sobic003G411700--Sobic002G271400 Sobic010G103500 Sobic010G103500 Sobic003G411700--Sobic010G103500 Sobic001G425200 Sobic001G425200 Sobic003G411700--Sobic001G425200 Sobic003G411700--Sobic003G343200 Sobic001G212600 Sobic001G212600 Sobic003G411700--Sobic001G212600 Sobic010G024000 Sobic010G024000 Sobic003G411700--Sobic010G024000 Sobic003G411700--Sobic005G160200 Sobic002G095300 Sobic002G095300 Sobic010G087100--Sobic002G095300 Sobic003G379900 Sobic003G379900 Sobic010G087100--Sobic003G379900 Sobic001G506300 Sobic001G506300 Sobic010G087100--Sobic001G506300 Sobic002G131100 Sobic002G131100 Sobic010G087100--Sobic002G131100 Sobic010G087100--Sobic008G090400 Sobic010G087100--Sobic008G118100 Sobic002G238800 Sobic002G238800 Sobic010G087100--Sobic002G238800 Sobic008G160600 Sobic008G160600 Sobic010G087100--Sobic008G160600 Sobic009G002200 Sobic009G002200 Sobic010G087100--Sobic009G002200 Sobic007G121650 Sobic007G121650 Sobic004G238801--Sobic007G121650 Sobic010G178300 Sobic010G178300 Sobic004G238801--Sobic010G178300 Sobic005G157300 Sobic005G157300 Sobic004G238801--Sobic005G157300 Sobic010G204700 Sobic010G204700 Sobic004G238801--Sobic010G204700 Sobic002G272300 Sobic002G272300 Sobic004G238801--Sobic002G272300 Sobic001G148450 Sobic001G148450 Sobic004G238801--Sobic001G148450 Sobic004G238801--Sobic001G377700 Sobic003G320300 Sobic003G320300 Sobic004G238801--Sobic003G320300 Sobic001G439400 Sobic001G439400 Sobic004G238801--Sobic001G439400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.