Gene annotation
Transcriptome id Sobic.006G106600.1
Synonym Sb06g018950
Functional annotation arsenical pump-driving ATPase, putative, expressed
UniProt C5Y9U4
Pfam PF01656
Panther DB PTHR10803 PTHR10803:SF8
NCBI CDD KOG2825; Putative arsenite-translocating ATPase
KEGG Orthology K01551; arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT3G10350 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os02g51100.1 : arsenical pump-driving ATPase, putative, expressed
MaizeGDB (Corn) Zm00025a011121
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G000400 OsPDIL1-4 protein disulfide isomerase PDIL1-4, expressed K09580: PDIA1, protein disulfide-isomerase A1
2 Sobic.002G173400 expressed protein -
3 Sobic.007G186400 resistance protein, putative, expressed -
4 Sobic.004G215600 - K15271: HFM1, ATP-dependent DNA helicase HFM1/MER3
5 Sobic.001G229300 expressed protein -
6 Sobic.001G191900 mitochondrial carrier protein, putative, expressed K15109: SLC25A20_29, CACT, CACL, solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29
7 Sobic.002G271400 RNA recognition motif containing protein, putative, expressed -
8 Sobic.010G030000 leucine rich repeat protein, putative, expressed -
9 Sobic.008G131900 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@resistance protein LR10, putative, expressed -
10 Sobic.002G426100 aldehyde dehydrogenase, putative, expressed -
11 Sobic.010G222800 expressed protein -
12 Sobic.001G486600 RFC4 - Putative clamp loader of PCNA, replication factor C subunit 4, expressed K10755: replication factor C subunit 2/4
13 Sobic.009G120400 methyltransferase, putative, expressed -
14 Sobic.010G024000 transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
15 Sobic.003G320100 pentatricopeptide containing protein, putative, expressed -
16 Sobic.003G183466 - -
17 Sobic.001G211500 LIG1 - Putative DNA ligase I, expressed K10747: DNA ligase 1
18 Sobic.009G014000 expressed protein -
19 Sobic.004G350200 KH domain containing protein, putative, expressed K14944: RNA-binding protein Nova
20 Sobic.006G106200 NAP domain containing protein, putative, expressed K11290: SET, TAF1, template-activating factor I


Gene co-expression network
sample Sobic006G106600 Sobic006G106600 Sobic004G000400 Sobic004G000400 Sobic006G106600--Sobic004G000400 Sobic002G173400 Sobic002G173400 Sobic006G106600--Sobic002G173400 Sobic007G186400 Sobic007G186400 Sobic006G106600--Sobic007G186400 Sobic004G215600 Sobic004G215600 Sobic006G106600--Sobic004G215600 Sobic001G229300 Sobic001G229300 Sobic006G106600--Sobic001G229300 Sobic001G191900 Sobic001G191900 Sobic006G106600--Sobic001G191900 Sobic002G271400 Sobic002G271400 Sobic006G106600--Sobic002G271400 Sobic010G030000 Sobic010G030000 Sobic006G106600--Sobic010G030000 Sobic008G131900 Sobic008G131900 Sobic006G106600--Sobic008G131900 Sobic004G000400--Sobic006G106600 Sobic004G000400--Sobic002G173400 Sobic004G000400--Sobic007G186400 Sobic009G120400 Sobic009G120400 Sobic004G000400--Sobic009G120400 Sobic004G350200 Sobic004G350200 Sobic004G000400--Sobic004G350200 Sobic004G000400--Sobic002G271400 Sobic004G000400--Sobic004G215600 Sobic002G123600 Sobic002G123600 Sobic004G000400--Sobic002G123600 Sobic010G257500 Sobic010G257500 Sobic004G000400--Sobic010G257500 Sobic002G173400--Sobic008G131900 Sobic002G173400--Sobic009G120400 Sobic003G194800 Sobic003G194800 Sobic002G173400--Sobic003G194800 Sobic008G047500 Sobic008G047500 Sobic002G173400--Sobic008G047500 Sobic002G052800 Sobic002G052800 Sobic002G173400--Sobic002G052800 Sobic010G038200 Sobic010G038200 Sobic002G173400--Sobic010G038200 Sobic010G143600 Sobic010G143600 Sobic002G173400--Sobic010G143600 Sobic002G173400--Sobic004G000400 Sobic005G060100 Sobic005G060100 Sobic002G173400--Sobic005G060100 Sobic007G186400--Sobic009G120400 Sobic007G186400--Sobic004G215600 Sobic002G308000 Sobic002G308000 Sobic007G186400--Sobic002G308000 Sobic007G186400--Sobic004G000400 Sobic007G186400--Sobic008G047500 Sobic007G186400--Sobic002G173400 Sobic007G186400--Sobic006G106600 Sobic002G426100 Sobic002G426100 Sobic007G186400--Sobic002G426100 Sobic007G105700 Sobic007G105700 Sobic007G186400--Sobic007G105700 Sobic004G215600--Sobic009G120400 Sobic004G215600--Sobic003G194800 Sobic004G215600--Sobic008G047500 Sobic004G215600--Sobic007G186400 Sobic008G095900 Sobic008G095900 Sobic004G215600--Sobic008G095900 Sobic006G095000 Sobic006G095000 Sobic004G215600--Sobic006G095000 Sobic008G085950 Sobic008G085950 Sobic004G215600--Sobic008G085950 Sobic004G215600--Sobic002G173400 Sobic001G043200 Sobic001G043200 Sobic004G215600--Sobic001G043200 Sobic001G123600 Sobic001G123600 Sobic001G229300--Sobic001G123600 Sobic003G129300 Sobic003G129300 Sobic001G229300--Sobic003G129300 Sobic004G354100 Sobic004G354100 Sobic001G229300--Sobic004G354100 Sobic004G256300 Sobic004G256300 Sobic001G229300--Sobic004G256300 Sobic003G010900 Sobic003G010900 Sobic001G229300--Sobic003G010900 Sobic002G066800 Sobic002G066800 Sobic001G229300--Sobic002G066800 Sobic003G222700 Sobic003G222700 Sobic001G229300--Sobic003G222700 Sobic002G142700 Sobic002G142700 Sobic001G229300--Sobic002G142700 Sobic001G229300--Sobic006G106600 Sobic001G191900--Sobic006G106600 Sobic001G191900--Sobic001G229300 Sobic004G277400 Sobic004G277400 Sobic001G191900--Sobic004G277400 Sobic002G153400 Sobic002G153400 Sobic001G191900--Sobic002G153400 Sobic007G022700 Sobic007G022700 Sobic001G191900--Sobic007G022700 Sobic007G051400 Sobic007G051400 Sobic001G191900--Sobic007G051400 Sobic001G191900--Sobic009G120400 Sobic001G191900--Sobic004G354100 Sobic001G191900--Sobic002G426100 Sobic004G306100 Sobic004G306100 Sobic002G271400--Sobic004G306100 Sobic003G343200 Sobic003G343200 Sobic002G271400--Sobic003G343200 Sobic006G127200 Sobic006G127200 Sobic002G271400--Sobic006G127200 Sobic003G411700 Sobic003G411700 Sobic002G271400--Sobic003G411700 Sobic001G025900 Sobic001G025900 Sobic002G271400--Sobic001G025900 Sobic010G222800 Sobic010G222800 Sobic002G271400--Sobic010G222800 Sobic003G013800 Sobic003G013800 Sobic002G271400--Sobic003G013800 Sobic008G004900 Sobic008G004900 Sobic002G271400--Sobic008G004900 Sobic010G024000 Sobic010G024000 Sobic002G271400--Sobic010G024000 Sobic010G030000--Sobic010G038200 Sobic009G136000 Sobic009G136000 Sobic010G030000--Sobic009G136000 Sobic010G030000--Sobic008G131900 Sobic010G009700 Sobic010G009700 Sobic010G030000--Sobic010G009700 Sobic010G243100 Sobic010G243100 Sobic010G030000--Sobic010G243100 Sobic005G210500 Sobic005G210500 Sobic010G030000--Sobic005G210500 Sobic003G216600 Sobic003G216600 Sobic010G030000--Sobic003G216600 Sobic001G486600 Sobic001G486600 Sobic010G030000--Sobic001G486600 Sobic010G030000--Sobic010G222800 Sobic008G131900--Sobic002G173400 Sobic008G131900--Sobic010G038200 Sobic008G131900--Sobic009G136000 Sobic008G131900--Sobic010G024000 Sobic008G131900--Sobic010G030000 Sobic008G131900--Sobic001G486600 Sobic008G131900--Sobic002G052800 Sobic008G131900--Sobic010G222800 Sobic006G193100 Sobic006G193100 Sobic008G131900--Sobic006G193100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.