Gene annotation
Transcriptome id Sobic.006G106200.1
Synonym Sb06g018910, NRP2
Functional annotation NAP domain containing protein, putative, expressed
UniProt C5Y9U1
Pfam PF00956
Panther DB PTHR11875 PTHR11875:SF68
NCBI CDD KOG1508; DNA replication factor/protein phosphatase inhibitor SET/SPR-2
KEGG Orthology K11290; SET, TAF1, template-activating factor I
Gene Ontology GO:0006334; nucleosome assembly GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT1G18800 : NAP1-related protein 2
RAP-DB (Rice) LOC_Os04g38620.1 : NAP domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a031717 , Zm00025a020798
Brachypodium -
Barley -
Wheat TraesCS2D02G323500 , TraesCS2B02G342400 , TraesCS2A02G344900
Populus -


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cDNA sequences
Sobic.006G106200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G211500 LIG1 - Putative DNA ligase I, expressed K10747: DNA ligase 1
2 Sobic.008G070700 leafbladeless1, putative, expressed -
3 Sobic.010G222800 expressed protein -
4 Sobic.003G072500 transcription factor X1, putative, expressed -
5 Sobic.003G289700 ulp1 protease family protein, putative, expressed K16287: ubiquitin-like-specific protease 1C/D
6 Sobic.004G149400 ankyrin, putative, expressed -
7 Sobic.001G005800 - K10885: XRCC5, KU80, ATP-dependent DNA helicase 2 subunit 2
8 Sobic.009G216500 expressed protein -
9 Sobic.002G112000 protein binding protein, putative, expressed -
10 Sobic.010G237800 ZOS1-21 - C2H2 zinc finger protein, expressed -
11 Sobic.003G411700 heat shock protein DnaJ, putative, expressed -
12 Sobic.006G106600 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
13 Sobic.006G008300 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
14 Sobic.002G196500 linker histone H1 and H5 family protein, expressed -
15 Sobic.003G343200 outer membrane protein, OMP85 family protein, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
16 Sobic.009G006900 ZOS5-01 - C2H2 zinc finger protein, expressed -
17 Sobic.002G021200 expressed protein K19001: HELLS, ATP-dependent DNA helicase
18 Sobic.002G110500 expressed protein K14308: NUP54, nuclear pore complex protein Nup54
19 Sobic.007G209600 ENT domain containing protein, expressed -
20 Sobic.004G078500 Leucine Rich Repeat family protein, expressed -


Gene co-expression network
sample Sobic006G106200 Sobic006G106200 Sobic001G211500 Sobic001G211500 Sobic006G106200--Sobic001G211500 Sobic008G070700 Sobic008G070700 Sobic006G106200--Sobic008G070700 Sobic010G222800 Sobic010G222800 Sobic006G106200--Sobic010G222800 Sobic003G072500 Sobic003G072500 Sobic006G106200--Sobic003G072500 Sobic003G289700 Sobic003G289700 Sobic006G106200--Sobic003G289700 Sobic004G149400 Sobic004G149400 Sobic006G106200--Sobic004G149400 Sobic001G005800 Sobic001G005800 Sobic006G106200--Sobic001G005800 Sobic009G216500 Sobic009G216500 Sobic006G106200--Sobic009G216500 Sobic002G112000 Sobic002G112000 Sobic006G106200--Sobic002G112000 Sobic001G211500--Sobic006G106200 Sobic007G209600 Sobic007G209600 Sobic001G211500--Sobic007G209600 Sobic007G031300 Sobic007G031300 Sobic001G211500--Sobic007G031300 Sobic009G052100 Sobic009G052100 Sobic001G211500--Sobic009G052100 Sobic003G411700 Sobic003G411700 Sobic001G211500--Sobic003G411700 Sobic008G169400 Sobic008G169400 Sobic001G211500--Sobic008G169400 Sobic007G076200 Sobic007G076200 Sobic001G211500--Sobic007G076200 Sobic002G271400 Sobic002G271400 Sobic001G211500--Sobic002G271400 Sobic010G024000 Sobic010G024000 Sobic001G211500--Sobic010G024000 Sobic006G272800 Sobic006G272800 Sobic008G070700--Sobic006G272800 Sobic008G070700--Sobic002G112000 Sobic004G267600 Sobic004G267600 Sobic008G070700--Sobic004G267600 Sobic001G439800 Sobic001G439800 Sobic008G070700--Sobic001G439800 Sobic008G070700--Sobic010G222800 Sobic010G092400 Sobic010G092400 Sobic008G070700--Sobic010G092400 Sobic002G317700 Sobic002G317700 Sobic008G070700--Sobic002G317700 Sobic001G175100 Sobic001G175100 Sobic008G070700--Sobic001G175100 Sobic003G393100 Sobic003G393100 Sobic008G070700--Sobic003G393100 Sobic003G343200 Sobic003G343200 Sobic010G222800--Sobic003G343200 Sobic010G222800--Sobic010G024000 Sobic010G222800--Sobic003G411700 Sobic010G222800--Sobic002G112000 Sobic010G222800--Sobic008G070700 Sobic010G222800--Sobic002G271400 Sobic010G222800--Sobic007G076200 Sobic003G423800 Sobic003G423800 Sobic010G222800--Sobic003G423800 Sobic008G131900 Sobic008G131900 Sobic010G222800--Sobic008G131900 Sobic003G072500--Sobic008G070700 Sobic003G072500--Sobic003G393100 Sobic009G057800 Sobic009G057800 Sobic003G072500--Sobic009G057800 Sobic003G072500--Sobic002G112000 Sobic003G072500--Sobic001G175100 Sobic003G072500--Sobic006G106200 Sobic003G072500--Sobic002G317700 Sobic007G161600 Sobic007G161600 Sobic003G072500--Sobic007G161600 Sobic003G129500 Sobic003G129500 Sobic003G072500--Sobic003G129500 Sobic005G172700 Sobic005G172700 Sobic003G289700--Sobic005G172700 Sobic003G289700--Sobic003G343200 Sobic003G289700--Sobic010G222800 Sobic010G237800 Sobic010G237800 Sobic003G289700--Sobic010G237800 Sobic003G320100 Sobic003G320100 Sobic003G289700--Sobic003G320100 Sobic003G289700--Sobic006G106200 Sobic009G138300 Sobic009G138300 Sobic003G289700--Sobic009G138300 Sobic010G243100 Sobic010G243100 Sobic003G289700--Sobic010G243100 Sobic005G160200 Sobic005G160200 Sobic003G289700--Sobic005G160200 Sobic004G207000 Sobic004G207000 Sobic004G149400--Sobic004G207000 Sobic004G220200 Sobic004G220200 Sobic004G149400--Sobic004G220200 Sobic005G062600 Sobic005G062600 Sobic004G149400--Sobic005G062600 Sobic004G149400--Sobic009G216500 Sobic003G091200 Sobic003G091200 Sobic004G149400--Sobic003G091200 Sobic004G149400--Sobic008G070700 Sobic004G149400--Sobic006G106200 Sobic002G196500 Sobic002G196500 Sobic004G149400--Sobic002G196500 Sobic001G171200 Sobic001G171200 Sobic004G149400--Sobic001G171200 Sobic002G253900 Sobic002G253900 Sobic001G005800--Sobic002G253900 Sobic008G045800 Sobic008G045800 Sobic001G005800--Sobic008G045800 Sobic002G056000 Sobic002G056000 Sobic001G005800--Sobic002G056000 Sobic002G335500 Sobic002G335500 Sobic001G005800--Sobic002G335500 Sobic009G148000 Sobic009G148000 Sobic001G005800--Sobic009G148000 Sobic006G200901 Sobic006G200901 Sobic001G005800--Sobic006G200901 Sobic001G005800--Sobic006G106200 Sobic004G014100 Sobic004G014100 Sobic001G005800--Sobic004G014100 Sobic002G343000 Sobic002G343000 Sobic001G005800--Sobic002G343000 Sobic006G022400 Sobic006G022400 Sobic009G216500--Sobic006G022400 Sobic004G199200 Sobic004G199200 Sobic009G216500--Sobic004G199200 Sobic009G216500--Sobic004G149400 Sobic006G008300 Sobic006G008300 Sobic009G216500--Sobic006G008300 Sobic008G045000 Sobic008G045000 Sobic009G216500--Sobic008G045000 Sobic009G216500--Sobic006G106200 Sobic009G216500--Sobic004G207000 Sobic004G313500 Sobic004G313500 Sobic009G216500--Sobic004G313500 Sobic009G216500--Sobic005G062600 Sobic002G112000--Sobic009G057800 Sobic007G201900 Sobic007G201900 Sobic002G112000--Sobic007G201900 Sobic002G112000--Sobic002G317700 Sobic002G112000--Sobic008G070700 Sobic002G112000--Sobic010G222800 Sobic002G112000--Sobic003G129500 Sobic002G112000--Sobic006G272800 Sobic004G190500 Sobic004G190500 Sobic002G112000--Sobic004G190500 Sobic009G002200 Sobic009G002200 Sobic002G112000--Sobic009G002200
Octagon: transcription factors


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