Gene annotation
Transcriptome id Sobic.009G216500.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6P9M8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g52650.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G216500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G022400 F-box/RNI-like/FBD-like domains-containing protein("PubMedID : 26759170,PubMedID : 24597475")@OsFBD9 - F-box and FBD domain containing protein, expressed -
2 Sobic.004G199200 expressed protein K10858: DNA mismatch repair protein PMS2
3 Sobic.004G149400 ankyrin, putative, expressed -
4 Sobic.006G008300 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
5 Sobic.008G045000 expressed protein -
6 Sobic.006G106200 NAP domain containing protein, putative, expressed K11290: SET, TAF1, template-activating factor I
7 Sobic.004G207000 fasciated ear2, putative, expressed -
8 Sobic.004G313500 acetyltransferase, GNAT family, putative, expressed -
9 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein
10 Sobic.007G161600 SET domain containing protein, expressed -
11 Sobic.009G259900 argonaute, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
12 Sobic.002G110500 expressed protein K14308: NUP54, nuclear pore complex protein Nup54
13 Sobic.009G031500 agenet domain containing protein, putative, expressed -
14 Sobic.001G395200 cyclin-related protein, putative, expressed -
15 Sobic.003G104100 expressed protein -
16 Sobic.001G079900 expressed protein -
17 Sobic.003G072500 transcription factor X1, putative, expressed -
18 Sobic.009G006900 ZOS5-01 - C2H2 zinc finger protein, expressed -
19 Sobic.003G323300 expressed protein -
20 Sobic.009G177200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase


Gene co-expression network
sample Sobic009G216500 Sobic009G216500 Sobic006G022400 Sobic006G022400 Sobic009G216500--Sobic006G022400 Sobic004G199200 Sobic004G199200 Sobic009G216500--Sobic004G199200 Sobic004G149400 Sobic004G149400 Sobic009G216500--Sobic004G149400 Sobic006G008300 Sobic006G008300 Sobic009G216500--Sobic006G008300 Sobic008G045000 Sobic008G045000 Sobic009G216500--Sobic008G045000 Sobic006G106200 Sobic006G106200 Sobic009G216500--Sobic006G106200 Sobic004G207000 Sobic004G207000 Sobic009G216500--Sobic004G207000 Sobic004G313500 Sobic004G313500 Sobic009G216500--Sobic004G313500 Sobic005G062600 Sobic005G062600 Sobic009G216500--Sobic005G062600 Sobic006G022400--Sobic004G207000 Sobic001G079900 Sobic001G079900 Sobic006G022400--Sobic001G079900 Sobic006G022400--Sobic009G216500 Sobic005G177900 Sobic005G177900 Sobic006G022400--Sobic005G177900 Sobic001G395200 Sobic001G395200 Sobic006G022400--Sobic001G395200 Sobic003G351900 Sobic003G351900 Sobic006G022400--Sobic003G351900 Sobic006G022500 Sobic006G022500 Sobic006G022400--Sobic006G022500 Sobic008G169400 Sobic008G169400 Sobic006G022400--Sobic008G169400 Sobic005G032600 Sobic005G032600 Sobic006G022400--Sobic005G032600 Sobic004G199200--Sobic009G216500 Sobic009G148200 Sobic009G148200 Sobic004G199200--Sobic009G148200 Sobic009G105400 Sobic009G105400 Sobic004G199200--Sobic009G105400 Sobic004G199200--Sobic006G022400 Sobic001G264201 Sobic001G264201 Sobic004G199200--Sobic001G264201 Sobic003G104100 Sobic003G104100 Sobic004G199200--Sobic003G104100 Sobic004G199200--Sobic001G395200 Sobic010G277200 Sobic010G277200 Sobic004G199200--Sobic010G277200 Sobic010G013500 Sobic010G013500 Sobic004G199200--Sobic010G013500 Sobic004G149400--Sobic004G207000 Sobic004G220200 Sobic004G220200 Sobic004G149400--Sobic004G220200 Sobic004G149400--Sobic005G062600 Sobic004G149400--Sobic009G216500 Sobic003G091200 Sobic003G091200 Sobic004G149400--Sobic003G091200 Sobic008G070700 Sobic008G070700 Sobic004G149400--Sobic008G070700 Sobic004G149400--Sobic006G106200 Sobic002G196500 Sobic002G196500 Sobic004G149400--Sobic002G196500 Sobic001G171200 Sobic001G171200 Sobic004G149400--Sobic001G171200 Sobic006G008300--Sobic001G395200 Sobic010G143600 Sobic010G143600 Sobic006G008300--Sobic010G143600 Sobic006G008300--Sobic003G104100 Sobic003G153900 Sobic003G153900 Sobic006G008300--Sobic003G153900 Sobic006G008300--Sobic009G216500 Sobic003G411700 Sobic003G411700 Sobic006G008300--Sobic003G411700 Sobic006G008300--Sobic009G105400 Sobic003G129500 Sobic003G129500 Sobic006G008300--Sobic003G129500 Sobic009G207400 Sobic009G207400 Sobic006G008300--Sobic009G207400 Sobic007G161600 Sobic007G161600 Sobic008G045000--Sobic007G161600 Sobic008G045000--Sobic009G216500 Sobic009G259900 Sobic009G259900 Sobic008G045000--Sobic009G259900 Sobic006G179300 Sobic006G179300 Sobic008G045000--Sobic006G179300 Sobic003G177000 Sobic003G177000 Sobic008G045000--Sobic003G177000 Sobic009G177200 Sobic009G177200 Sobic008G045000--Sobic009G177200 Sobic003G072500 Sobic003G072500 Sobic008G045000--Sobic003G072500 Sobic001G300000 Sobic001G300000 Sobic008G045000--Sobic001G300000 Sobic006G112700 Sobic006G112700 Sobic008G045000--Sobic006G112700 Sobic001G211500 Sobic001G211500 Sobic006G106200--Sobic001G211500 Sobic006G106200--Sobic008G070700 Sobic010G222800 Sobic010G222800 Sobic006G106200--Sobic010G222800 Sobic006G106200--Sobic003G072500 Sobic003G289700 Sobic003G289700 Sobic006G106200--Sobic003G289700 Sobic006G106200--Sobic004G149400 Sobic001G005800 Sobic001G005800 Sobic006G106200--Sobic001G005800 Sobic006G106200--Sobic009G216500 Sobic002G112000 Sobic002G112000 Sobic006G106200--Sobic002G112000 Sobic004G207000--Sobic006G022400 Sobic001G540700 Sobic001G540700 Sobic004G207000--Sobic001G540700 Sobic007G125700 Sobic007G125700 Sobic004G207000--Sobic007G125700 Sobic009G006900 Sobic009G006900 Sobic004G207000--Sobic009G006900 Sobic002G302600 Sobic002G302600 Sobic004G207000--Sobic002G302600 Sobic004G207000--Sobic004G149400 Sobic004G207000--Sobic005G032600 Sobic010G149600 Sobic010G149600 Sobic004G207000--Sobic010G149600 Sobic009G031500 Sobic009G031500 Sobic004G207000--Sobic009G031500 Sobic004G313500--Sobic009G216500 Sobic006G140400 Sobic006G140400 Sobic004G313500--Sobic006G140400 Sobic001G448100 Sobic001G448100 Sobic004G313500--Sobic001G448100 Sobic002G354700 Sobic002G354700 Sobic004G313500--Sobic002G354700 Sobic004G313500--Sobic006G106200 Sobic010G269300 Sobic010G269300 Sobic004G313500--Sobic010G269300 Sobic004G020900 Sobic004G020900 Sobic004G313500--Sobic004G020900 Sobic007G031300 Sobic007G031300 Sobic004G313500--Sobic007G031300 Sobic001G453500 Sobic001G453500 Sobic004G313500--Sobic001G453500 Sobic004G267600 Sobic004G267600 Sobic005G062600--Sobic004G267600 Sobic010G092400 Sobic010G092400 Sobic005G062600--Sobic010G092400 Sobic007G121600 Sobic007G121600 Sobic005G062600--Sobic007G121600 Sobic005G062600--Sobic001G079900 Sobic010G129700 Sobic010G129700 Sobic005G062600--Sobic010G129700 Sobic005G062600--Sobic007G161600 Sobic001G493900 Sobic001G493900 Sobic005G062600--Sobic001G493900 Sobic005G062600--Sobic008G070700 Sobic003G019900 Sobic003G019900 Sobic005G062600--Sobic003G019900
Octagon: transcription factors


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