Gene annotation
Transcriptome id Sobic.009G259900.1
Synonym Sb09g030910, AGO4, OCP11
Functional annotation argonaute, putative, expressed
UniProt C5YX36
Pfam PF16487 PF16488 PF08699 PF16486 PF02170 PF02171
Panther DB PTHR22891 PTHR22891:SF20
NCBI CDD -
KEGG Orthology K11593; ELF2C, eukaryotic translation initiation factor 2C
Gene Ontology GO:0005515; protein binding GO:0003676nucleic acid binding


Orthologs (automatic annotation)
TAIR AT2G27040 : Argonaute family protein
RAP-DB (Rice) LOC_Os04g06770.2 : argonaute, putative, expressed
MaizeGDB (Corn) Zm00025a044796
Brachypodium KQK04543
Barley -
Wheat TraesCS7D02G520400 , TraesCS7B02G450300 , TraesCS7A02G533100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G395200 cyclin-related protein, putative, expressed -
2 Sobic.004G043750 - K16251: DNA-directed RNA polymerase V subunit 1
3 Sobic.003G104100 expressed protein -
4 Sobic.003G129500 argonaute, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
5 Sobic.008G045000 expressed protein -
6 Sobic.005G153000 agenet domain containing protein, expressed -
7 Sobic.006G008300 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
8 Sobic.010G149600 intracellular protein transport protein USO1-related, putative, expressed -
9 Sobic.005G163400 dnaJ domain containing protein, expressed -
10 Sobic.002G006100 phytosulfokine receptor precursor, putative, expressed -
11 Sobic.004G199200 expressed protein K10858: DNA mismatch repair protein PMS2
12 Sobic.009G216500 expressed protein -
13 Sobic.001G079900 expressed protein -
14 Sobic.008G052300 plant protein of unknown function DUF869 domain containing protein, expressed -
15 Sobic.006G022400 F-box/RNI-like/FBD-like domains-containing protein("PubMedID : 26759170,PubMedID : 24597475")@OsFBD9 - F-box and FBD domain containing protein, expressed -
16 Sobic.003G323300 expressed protein -
17 Sobic.009G225500 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
18 Sobic.004G078500 Leucine Rich Repeat family protein, expressed -
19 Sobic.007G125700 NHL repeat-containing protein, putative, expressed -
20 Sobic.004G207000 fasciated ear2, putative, expressed -


Gene co-expression network
sample Sobic009G259900 Sobic009G259900 Sobic001G395200 Sobic001G395200 Sobic009G259900--Sobic001G395200 Sobic004G043750 Sobic004G043750 Sobic009G259900--Sobic004G043750 Sobic003G104100 Sobic003G104100 Sobic009G259900--Sobic003G104100 Sobic003G129500 Sobic003G129500 Sobic009G259900--Sobic003G129500 Sobic008G045000 Sobic008G045000 Sobic009G259900--Sobic008G045000 Sobic005G153000 Sobic005G153000 Sobic009G259900--Sobic005G153000 Sobic006G008300 Sobic006G008300 Sobic009G259900--Sobic006G008300 Sobic010G149600 Sobic010G149600 Sobic009G259900--Sobic010G149600 Sobic005G163400 Sobic005G163400 Sobic009G259900--Sobic005G163400 Sobic001G395200--Sobic003G104100 Sobic001G395200--Sobic009G259900 Sobic002G219900 Sobic002G219900 Sobic001G395200--Sobic002G219900 Sobic001G395200--Sobic010G149600 Sobic003G351900 Sobic003G351900 Sobic001G395200--Sobic003G351900 Sobic001G395200--Sobic006G008300 Sobic007G125700 Sobic007G125700 Sobic001G395200--Sobic007G125700 Sobic001G395200--Sobic004G043750 Sobic001G079900 Sobic001G079900 Sobic001G395200--Sobic001G079900 Sobic009G190200 Sobic009G190200 Sobic004G043750--Sobic009G190200 Sobic006G280100 Sobic006G280100 Sobic004G043750--Sobic006G280100 Sobic004G043750--Sobic009G259900 Sobic010G236200 Sobic010G236200 Sobic004G043750--Sobic010G236200 Sobic004G043750--Sobic001G395200 Sobic004G111000 Sobic004G111000 Sobic004G043750--Sobic004G111000 Sobic010G269300 Sobic010G269300 Sobic004G043750--Sobic010G269300 Sobic004G043750--Sobic007G125700 Sobic010G233000 Sobic010G233000 Sobic004G043750--Sobic010G233000 Sobic003G104100--Sobic001G395200 Sobic008G052300 Sobic008G052300 Sobic003G104100--Sobic008G052300 Sobic003G104100--Sobic005G163400 Sobic001G425700 Sobic001G425700 Sobic003G104100--Sobic001G425700 Sobic006G067700 Sobic006G067700 Sobic003G104100--Sobic006G067700 Sobic010G024500 Sobic010G024500 Sobic003G104100--Sobic010G024500 Sobic004G179800 Sobic004G179800 Sobic003G104100--Sobic004G179800 Sobic006G084300 Sobic006G084300 Sobic003G104100--Sobic006G084300 Sobic003G104100--Sobic009G259900 Sobic003G129500--Sobic005G153000 Sobic002G112000 Sobic002G112000 Sobic003G129500--Sobic002G112000 Sobic002G168000 Sobic002G168000 Sobic003G129500--Sobic002G168000 Sobic009G012400 Sobic009G012400 Sobic003G129500--Sobic009G012400 Sobic010G250400 Sobic010G250400 Sobic003G129500--Sobic010G250400 Sobic003G423800 Sobic003G423800 Sobic003G129500--Sobic003G423800 Sobic003G370300 Sobic003G370300 Sobic003G129500--Sobic003G370300 Sobic010G222800 Sobic010G222800 Sobic003G129500--Sobic010G222800 Sobic003G183466 Sobic003G183466 Sobic003G129500--Sobic003G183466 Sobic007G161600 Sobic007G161600 Sobic008G045000--Sobic007G161600 Sobic009G216500 Sobic009G216500 Sobic008G045000--Sobic009G216500 Sobic008G045000--Sobic009G259900 Sobic006G179300 Sobic006G179300 Sobic008G045000--Sobic006G179300 Sobic003G177000 Sobic003G177000 Sobic008G045000--Sobic003G177000 Sobic009G177200 Sobic009G177200 Sobic008G045000--Sobic009G177200 Sobic003G072500 Sobic003G072500 Sobic008G045000--Sobic003G072500 Sobic001G300000 Sobic001G300000 Sobic008G045000--Sobic001G300000 Sobic006G112700 Sobic006G112700 Sobic008G045000--Sobic006G112700 Sobic009G077300 Sobic009G077300 Sobic005G153000--Sobic009G077300 Sobic005G153000--Sobic002G168000 Sobic004G282601 Sobic004G282601 Sobic005G153000--Sobic004G282601 Sobic010G037901 Sobic010G037901 Sobic005G153000--Sobic010G037901 Sobic003G290400 Sobic003G290400 Sobic005G153000--Sobic003G290400 Sobic007G187700 Sobic007G187700 Sobic005G153000--Sobic007G187700 Sobic006G221300 Sobic006G221300 Sobic005G153000--Sobic006G221300 Sobic005G153000--Sobic003G129500 Sobic005G196600 Sobic005G196600 Sobic005G153000--Sobic005G196600 Sobic006G008300--Sobic001G395200 Sobic010G143600 Sobic010G143600 Sobic006G008300--Sobic010G143600 Sobic006G008300--Sobic003G104100 Sobic003G153900 Sobic003G153900 Sobic006G008300--Sobic003G153900 Sobic006G008300--Sobic009G216500 Sobic003G411700 Sobic003G411700 Sobic006G008300--Sobic003G411700 Sobic009G105400 Sobic009G105400 Sobic006G008300--Sobic009G105400 Sobic006G008300--Sobic003G129500 Sobic009G207400 Sobic009G207400 Sobic006G008300--Sobic009G207400 Sobic010G149600--Sobic002G219900 Sobic010G149600--Sobic007G125700 Sobic002G430900 Sobic002G430900 Sobic010G149600--Sobic002G430900 Sobic010G149600--Sobic001G395200 Sobic009G006900 Sobic009G006900 Sobic010G149600--Sobic009G006900 Sobic010G149600--Sobic010G236200 Sobic005G032600 Sobic005G032600 Sobic010G149600--Sobic005G032600 Sobic004G207000 Sobic004G207000 Sobic010G149600--Sobic004G207000 Sobic010G149600--Sobic004G043750 Sobic005G163400--Sobic010G024500 Sobic001G390400 Sobic001G390400 Sobic005G163400--Sobic001G390400 Sobic005G163400--Sobic009G077300 Sobic005G163400--Sobic003G104100 Sobic005G163400--Sobic008G052300 Sobic008G190000 Sobic008G190000 Sobic005G163400--Sobic008G190000 Sobic001G054700 Sobic001G054700 Sobic005G163400--Sobic001G054700 Sobic005G163400--Sobic005G153000 Sobic002G050700 Sobic002G050700 Sobic005G163400--Sobic002G050700
Octagon: transcription factors


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