Gene annotation
Transcriptome id Sobic.007G161600.1
Synonym Sb07g023480, SDG31, SUVR4
Functional annotation SET domain containing protein, expressed
UniProt C5YMQ0 , C6JS47
Pfam PF05033 PF00856 PF10440
Panther DB PTHR22884 PTHR22884:SF376
NCBI CDD KOG1082; Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing
KEGG Orthology -
Gene Ontology GO:0018024; histone-lysine N-methyltransferase activity GO:0008270zinc ion binding GO:0005634nucleus GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT3G04380 : SET-domain containing protein lysine methyltransferase family protein
RAP-DB (Rice) LOC_Os02g40770.1 : SET domain containing protein, expressed
MaizeGDB (Corn) Zm00025a030486 , Zm00025a005492
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G151600 PMR5, putative, expressed -
2 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein
3 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
4 Sobic.001G043500 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
5 Sobic.003G019900 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.010G092400 glycosyl transferase 8 domain containing protein, putative, expressed -
7 Sobic.006G163300 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
8 Sobic.003G008800 expressed protein -
9 Sobic.003G046400 transcriptional corepressor LEUNIG, putative, expressed -
10 Sobic.007G121600 - -
11 Sobic.008G070700 leafbladeless1, putative, expressed -
12 Sobic.007G128100 expressed protein -
13 Sobic.008G045000 expressed protein -
14 Sobic.009G057800 kelch repeat-containing protein, putative, expressed -
15 Sobic.010G255000 uncharacterized protein At4g06744 precursor, putative, expressed -
16 Sobic.006G221800 OsFBX46 - F-box domain containing protein, expressed -
17 Sobic.007G033700 OsFBX309 - F-box domain containing protein, expressed -
18 Sobic.003G129200 argonaute, putative, expressed -
19 Sobic.002G317700 BNR/Asp-box repeat family protein, putative, expressed -
20 Sobic.003G090600 seven in absentia protein family protein, putative, expressed -


Gene co-expression network
sample Sobic007G161600 Sobic007G161600 Sobic008G151600 Sobic008G151600 Sobic007G161600--Sobic008G151600 Sobic005G062600 Sobic005G062600 Sobic007G161600--Sobic005G062600 Sobic007G147200 Sobic007G147200 Sobic007G161600--Sobic007G147200 Sobic001G043500 Sobic001G043500 Sobic007G161600--Sobic001G043500 Sobic003G019900 Sobic003G019900 Sobic007G161600--Sobic003G019900 Sobic010G092400 Sobic010G092400 Sobic007G161600--Sobic010G092400 Sobic006G163300 Sobic006G163300 Sobic007G161600--Sobic006G163300 Sobic003G008800 Sobic003G008800 Sobic007G161600--Sobic003G008800 Sobic003G046400 Sobic003G046400 Sobic007G161600--Sobic003G046400 Sobic008G151600--Sobic003G019900 Sobic006G221800 Sobic006G221800 Sobic008G151600--Sobic006G221800 Sobic006G274200 Sobic006G274200 Sobic008G151600--Sobic006G274200 Sobic001G493900 Sobic001G493900 Sobic008G151600--Sobic001G493900 Sobic001G101700 Sobic001G101700 Sobic008G151600--Sobic001G101700 Sobic010G077000 Sobic010G077000 Sobic008G151600--Sobic010G077000 Sobic008G151600--Sobic007G161600 Sobic005G032600 Sobic005G032600 Sobic008G151600--Sobic005G032600 Sobic008G151600--Sobic007G147200 Sobic004G267600 Sobic004G267600 Sobic005G062600--Sobic004G267600 Sobic005G062600--Sobic010G092400 Sobic007G121600 Sobic007G121600 Sobic005G062600--Sobic007G121600 Sobic001G079900 Sobic001G079900 Sobic005G062600--Sobic001G079900 Sobic010G129700 Sobic010G129700 Sobic005G062600--Sobic010G129700 Sobic005G062600--Sobic007G161600 Sobic005G062600--Sobic001G493900 Sobic008G070700 Sobic008G070700 Sobic005G062600--Sobic008G070700 Sobic005G062600--Sobic003G019900 Sobic010G070900 Sobic010G070900 Sobic007G147200--Sobic010G070900 Sobic010G255000 Sobic010G255000 Sobic007G147200--Sobic010G255000 Sobic004G003700 Sobic004G003700 Sobic007G147200--Sobic004G003700 Sobic007G147200--Sobic003G046400 Sobic007G147200--Sobic006G163300 Sobic001G143400 Sobic001G143400 Sobic007G147200--Sobic001G143400 Sobic007G147200--Sobic003G019900 Sobic006G107500 Sobic006G107500 Sobic007G147200--Sobic006G107500 Sobic007G147200--Sobic001G101700 Sobic001G043500--Sobic007G161600 Sobic005G162900 Sobic005G162900 Sobic001G043500--Sobic005G162900 Sobic002G078900 Sobic002G078900 Sobic001G043500--Sobic002G078900 Sobic002G205000 Sobic002G205000 Sobic001G043500--Sobic002G205000 Sobic007G121700 Sobic007G121700 Sobic001G043500--Sobic007G121700 Sobic007G033700 Sobic007G033700 Sobic001G043500--Sobic007G033700 Sobic001G463301 Sobic001G463301 Sobic001G043500--Sobic001G463301 Sobic003G091200 Sobic003G091200 Sobic001G043500--Sobic003G091200 Sobic002G178700 Sobic002G178700 Sobic001G043500--Sobic002G178700 Sobic003G019900--Sobic006G274200 Sobic003G019900--Sobic001G493900 Sobic003G338700 Sobic003G338700 Sobic003G019900--Sobic003G338700 Sobic003G019900--Sobic008G151600 Sobic003G019900--Sobic007G147200 Sobic010G014500 Sobic010G014500 Sobic003G019900--Sobic010G014500 Sobic003G019900--Sobic006G163300 Sobic001G074000 Sobic001G074000 Sobic003G019900--Sobic001G074000 Sobic003G019900--Sobic004G267600 Sobic007G116800 Sobic007G116800 Sobic010G092400--Sobic007G116800 Sobic010G092400--Sobic005G062600 Sobic003G085900 Sobic003G085900 Sobic010G092400--Sobic003G085900 Sobic007G007800 Sobic007G007800 Sobic010G092400--Sobic007G007800 Sobic009G184200 Sobic009G184200 Sobic010G092400--Sobic009G184200 Sobic010G269700 Sobic010G269700 Sobic010G092400--Sobic010G269700 Sobic007G087800 Sobic007G087800 Sobic010G092400--Sobic007G087800 Sobic003G387700 Sobic003G387700 Sobic010G092400--Sobic003G387700 Sobic010G092400--Sobic008G070700 Sobic002G360600 Sobic002G360600 Sobic006G163300--Sobic002G360600 Sobic001G455900 Sobic001G455900 Sobic006G163300--Sobic001G455900 Sobic006G163300--Sobic003G046400 Sobic003G010700 Sobic003G010700 Sobic006G163300--Sobic003G010700 Sobic006G163300--Sobic010G070900 Sobic006G163300--Sobic007G147200 Sobic006G163300--Sobic007G033700 Sobic006G163300--Sobic006G107500 Sobic001G101900 Sobic001G101900 Sobic006G163300--Sobic001G101900 Sobic003G008800--Sobic005G062600 Sobic005G020100 Sobic005G020100 Sobic003G008800--Sobic005G020100 Sobic003G090600 Sobic003G090600 Sobic003G008800--Sobic003G090600 Sobic007G023100 Sobic007G023100 Sobic003G008800--Sobic007G023100 Sobic003G008800--Sobic007G161600 Sobic003G008800--Sobic010G092400 Sobic003G008800--Sobic003G085900 Sobic002G430700 Sobic002G430700 Sobic003G008800--Sobic002G430700 Sobic003G129200 Sobic003G129200 Sobic003G008800--Sobic003G129200 Sobic003G046400--Sobic001G455900 Sobic001G071600 Sobic001G071600 Sobic003G046400--Sobic001G071600 Sobic003G046400--Sobic007G033700 Sobic001G106500 Sobic001G106500 Sobic003G046400--Sobic001G106500 Sobic006G271600 Sobic006G271600 Sobic003G046400--Sobic006G271600 Sobic010G183800 Sobic010G183800 Sobic003G046400--Sobic010G183800 Sobic003G046400--Sobic006G163300 Sobic003G046400--Sobic010G070900 Sobic009G048300 Sobic009G048300 Sobic003G046400--Sobic009G048300
Octagon: transcription factors


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