Gene annotation
Transcriptome id Sobic.003G008800.2
Synonym Sb03g000940
Functional annotation expressed protein
UniProt A0A1B6Q0Q1
Pfam PF14383
Panther DB PTHR34282 PTHR34282:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G42710 : -
RAP-DB (Rice) LOC_Os01g12840.1 : expressed protein
MaizeGDB (Corn) Zm00025a039668 , Zm00025a035982
Brachypodium KQK03405 , PNT70204 , PNT70203
Barley HORVU3Hr1G031220.9 , HORVU3Hr1G031220.8 , HORVU3Hr1G031220.5 , HORVU3Hr1G031220.4 , HORVU3Hr1G031220.7 , HORVU3Hr1G031220.6 , HORVU3Hr1G031220.1 , HORVU3Hr1G031220.3 , HORVU3Hr1G031220.2 , HORVU3Hr1G031220.11 , HORVU3Hr1G031220.10
Wheat TraesCS3D02G161000 , TraesCS3B02G180200 , TraesCS3A02G153600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein
2 Sobic.005G020100 CDC45B - Putative DNA replication initiation protein, expressed K06628: cell division control protein 45
3 Sobic.003G090600 seven in absentia protein family protein, putative, expressed -
4 Sobic.007G023100 CCT motif family protein, expressed -
5 Sobic.007G161600 SET domain containing protein, expressed -
6 Sobic.010G092400 glycosyl transferase 8 domain containing protein, putative, expressed -
7 Sobic.003G085900 Glycosyl hydrolase. predicted target of sbi-miR-5568 and sbi-miR-6220 expressed in the stems of sweet sorghum(PubMedID : 26117170)@glycosyl hydrolase, family 31, putative, expressed K15925: alpha-D-xyloside xylohydrolase
8 Sobic.002G430700 glycosyltransferase family 43 protein, putative, expressed -
9 Sobic.003G129200 argonaute, putative, expressed -
10 Sobic.003G295100 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.003G046400 transcriptional corepressor LEUNIG, putative, expressed -
12 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
13 Sobic.003G374100 beta-galactosidase precursor, putative, expressed -
14 Sobic.001G271600 transferase family protein, putative, expressed -
15 Sobic.001G463301 - -
16 Sobic.006G163300 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
17 Sobic.006G228000 glycine-rich protein 2, putative -
18 Sobic.007G128100 expressed protein -
19 Sobic.003G117200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed -
20 Sobic.001G106500 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -


Gene co-expression network
sample Sobic003G008800 Sobic003G008800 Sobic005G062600 Sobic005G062600 Sobic003G008800--Sobic005G062600 Sobic005G020100 Sobic005G020100 Sobic003G008800--Sobic005G020100 Sobic003G090600 Sobic003G090600 Sobic003G008800--Sobic003G090600 Sobic007G023100 Sobic007G023100 Sobic003G008800--Sobic007G023100 Sobic007G161600 Sobic007G161600 Sobic003G008800--Sobic007G161600 Sobic010G092400 Sobic010G092400 Sobic003G008800--Sobic010G092400 Sobic003G085900 Sobic003G085900 Sobic003G008800--Sobic003G085900 Sobic002G430700 Sobic002G430700 Sobic003G008800--Sobic002G430700 Sobic003G129200 Sobic003G129200 Sobic003G008800--Sobic003G129200 Sobic004G267600 Sobic004G267600 Sobic005G062600--Sobic004G267600 Sobic005G062600--Sobic010G092400 Sobic007G121600 Sobic007G121600 Sobic005G062600--Sobic007G121600 Sobic001G079900 Sobic001G079900 Sobic005G062600--Sobic001G079900 Sobic010G129700 Sobic010G129700 Sobic005G062600--Sobic010G129700 Sobic005G062600--Sobic007G161600 Sobic001G493900 Sobic001G493900 Sobic005G062600--Sobic001G493900 Sobic008G070700 Sobic008G070700 Sobic005G062600--Sobic008G070700 Sobic003G019900 Sobic003G019900 Sobic005G062600--Sobic003G019900 Sobic007G007800 Sobic007G007800 Sobic005G020100--Sobic007G007800 Sobic001G271600 Sobic001G271600 Sobic005G020100--Sobic001G271600 Sobic007G000500 Sobic007G000500 Sobic005G020100--Sobic007G000500 Sobic005G020100--Sobic003G085900 Sobic010G204700 Sobic010G204700 Sobic005G020100--Sobic010G204700 Sobic003G374100 Sobic003G374100 Sobic005G020100--Sobic003G374100 Sobic010G269700 Sobic010G269700 Sobic005G020100--Sobic010G269700 Sobic002G272300 Sobic002G272300 Sobic005G020100--Sobic002G272300 Sobic006G228000 Sobic006G228000 Sobic005G020100--Sobic006G228000 Sobic003G090600--Sobic002G430700 Sobic003G090600--Sobic003G085900 Sobic003G090600--Sobic007G023100 Sobic006G107500 Sobic006G107500 Sobic003G090600--Sobic006G107500 Sobic003G090600--Sobic001G271600 Sobic006G163300 Sobic006G163300 Sobic003G090600--Sobic006G163300 Sobic006G271600 Sobic006G271600 Sobic003G090600--Sobic006G271600 Sobic002G360600 Sobic002G360600 Sobic003G090600--Sobic002G360600 Sobic003G046400 Sobic003G046400 Sobic003G090600--Sobic003G046400 Sobic007G023100--Sobic003G090600 Sobic007G147200 Sobic007G147200 Sobic007G023100--Sobic007G147200 Sobic007G023100--Sobic002G430700 Sobic007G023100--Sobic006G107500 Sobic007G023100--Sobic005G062600 Sobic007G033700 Sobic007G033700 Sobic007G023100--Sobic007G033700 Sobic007G023100--Sobic003G019900 Sobic007G128100 Sobic007G128100 Sobic007G023100--Sobic007G128100 Sobic007G023100--Sobic006G163300 Sobic008G151600 Sobic008G151600 Sobic007G161600--Sobic008G151600 Sobic007G161600--Sobic005G062600 Sobic007G161600--Sobic007G147200 Sobic001G043500 Sobic001G043500 Sobic007G161600--Sobic001G043500 Sobic007G161600--Sobic003G019900 Sobic007G161600--Sobic010G092400 Sobic007G161600--Sobic006G163300 Sobic007G161600--Sobic003G008800 Sobic007G161600--Sobic003G046400 Sobic007G116800 Sobic007G116800 Sobic010G092400--Sobic007G116800 Sobic010G092400--Sobic005G062600 Sobic010G092400--Sobic003G085900 Sobic010G092400--Sobic007G007800 Sobic009G184200 Sobic009G184200 Sobic010G092400--Sobic009G184200 Sobic010G092400--Sobic010G269700 Sobic007G087800 Sobic007G087800 Sobic010G092400--Sobic007G087800 Sobic003G387700 Sobic003G387700 Sobic010G092400--Sobic003G387700 Sobic010G092400--Sobic008G070700 Sobic003G085900--Sobic006G107500 Sobic003G085900--Sobic002G360600 Sobic004G237000 Sobic004G237000 Sobic003G085900--Sobic004G237000 Sobic003G085900--Sobic010G092400 Sobic003G085900--Sobic002G430700 Sobic003G085900--Sobic007G147200 Sobic003G085900--Sobic006G163300 Sobic003G085900--Sobic003G046400 Sobic003G316601 Sobic003G316601 Sobic003G085900--Sobic003G316601 Sobic002G430700--Sobic006G107500 Sobic002G430700--Sobic003G085900 Sobic002G430700--Sobic006G163300 Sobic002G430700--Sobic002G360600 Sobic010G070900 Sobic010G070900 Sobic002G430700--Sobic010G070900 Sobic002G430700--Sobic003G090600 Sobic002G430700--Sobic003G046400 Sobic002G430700--Sobic007G147200 Sobic010G014500 Sobic010G014500 Sobic002G430700--Sobic010G014500 Sobic003G129200--Sobic003G374100 Sobic004G234600 Sobic004G234600 Sobic003G129200--Sobic004G234600 Sobic008G137700 Sobic008G137700 Sobic003G129200--Sobic008G137700 Sobic001G137800 Sobic001G137800 Sobic003G129200--Sobic001G137800 Sobic003G088600 Sobic003G088600 Sobic003G129200--Sobic003G088600 Sobic002G053350 Sobic002G053350 Sobic003G129200--Sobic002G053350 Sobic002G239101 Sobic002G239101 Sobic003G129200--Sobic002G239101 Sobic003G295100 Sobic003G295100 Sobic003G129200--Sobic003G295100 Sobic001G235200 Sobic001G235200 Sobic003G129200--Sobic001G235200
Octagon: transcription factors


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