Gene annotation
Transcriptome id Sobic.003G289700.1,Sobic.003G289700.2
Synonym OTS1, ULP1D, Sb03g034030
Functional annotation ulp1 protease family protein, putative, expressed
UniProt C5XJ69 , C5XJ71
Pfam PF02902
Panther DB PTHR12606 PTHR12606:SF28
NCBI CDD KOG3246; Sentrin-specific cysteine protease (Ulp1 family)
KEGG Orthology K16287; ubiquitin-like-specific protease 1C/D
Gene Ontology GO:0008234; cysteine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT1G60220 : UB-like protease 1D
RAP-DB (Rice) LOC_Os12g41380.1 : ulp1 protease family protein, putative, expressed
MaizeGDB (Corn) Zm00025a027672
Brachypodium -
Barley HORVU3Hr1G070080.10 , HORVU3Hr1G070080.11 , HORVU3Hr1G070080.12 , HORVU3Hr1G070080.13 , HORVU3Hr1G070080.14 , HORVU3Hr1G070080.15 , HORVU3Hr1G070080.16 , HORVU3Hr1G070080.17 , HORVU3Hr1G070080.18 , HORVU3Hr1G070080.19 , HORVU3Hr1G070080.25 , HORVU3Hr1G070080.26 , HORVU3Hr1G070080.21 , HORVU3Hr1G070080.20 , HORVU3Hr1G070080.23 , HORVU3Hr1G070080.22 , HORVU3Hr1G070080.29 , HORVU3Hr1G070080.28 , HORVU3Hr1G070080.3 , HORVU3Hr1G070080.1 , HORVU3Hr1G070080.6 , HORVU3Hr1G070080.7 , HORVU3Hr1G070080.4 , HORVU3Hr1G070080.8 , HORVU3Hr1G070080.9
Wheat TraesCS3D02G278500 , TraesCS3B02G312400 , TraesCS3B02G312400 , TraesCS3A02G278200
Populus -


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cDNA sequences
Sobic.003G289700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G172700 expressed protein -
2 Sobic.003G343200 outer membrane protein, OMP85 family protein, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
3 Sobic.010G222800 expressed protein -
4 Sobic.010G237800 ZOS1-21 - C2H2 zinc finger protein, expressed -
5 Sobic.003G320100 pentatricopeptide containing protein, putative, expressed -
6 Sobic.006G106200 NAP domain containing protein, putative, expressed K11290: SET, TAF1, template-activating factor I
7 Sobic.009G138300 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
8 Sobic.010G243100 RPA2C - Putative single-stranded DNA binding complex subunit 2, expressed K10739: RFA2, replication factor A2
9 Sobic.005G160200 sialyltransferase family domain containing protein, expressed -
10 Sobic.003G013800 expressed protein -
11 Sobic.001G500500 expressed protein -
12 Sobic.008G180400 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
13 Sobic.010G257500 expressed protein -
14 Sobic.008G070700 leafbladeless1, putative, expressed -
15 Sobic.004G014100 sialyltransferase family domain containing protein, expressed -
16 Sobic.003G423800 endonuclease, putative, expressed K08991: crossover junction endonuclease MUS81
17 Sobic.001G496600 expressed protein -
18 Sobic.002G112000 protein binding protein, putative, expressed -
19 Sobic.002G238800 mago nashi, putative, expressed K12877: protein mago nashi
20 Sobic.010G030000 leucine rich repeat protein, putative, expressed -


Gene co-expression network
sample Sobic003G289700 Sobic003G289700 Sobic005G172700 Sobic005G172700 Sobic003G289700--Sobic005G172700 Sobic003G343200 Sobic003G343200 Sobic003G289700--Sobic003G343200 Sobic010G222800 Sobic010G222800 Sobic003G289700--Sobic010G222800 Sobic010G237800 Sobic010G237800 Sobic003G289700--Sobic010G237800 Sobic003G320100 Sobic003G320100 Sobic003G289700--Sobic003G320100 Sobic006G106200 Sobic006G106200 Sobic003G289700--Sobic006G106200 Sobic009G138300 Sobic009G138300 Sobic003G289700--Sobic009G138300 Sobic010G243100 Sobic010G243100 Sobic003G289700--Sobic010G243100 Sobic005G160200 Sobic005G160200 Sobic003G289700--Sobic005G160200 Sobic002G238800 Sobic002G238800 Sobic005G172700--Sobic002G238800 Sobic005G172700--Sobic003G289700 Sobic008G180400 Sobic008G180400 Sobic005G172700--Sobic008G180400 Sobic001G081800 Sobic001G081800 Sobic005G172700--Sobic001G081800 Sobic005G164800 Sobic005G164800 Sobic005G172700--Sobic005G164800 Sobic004G218000 Sobic004G218000 Sobic005G172700--Sobic004G218000 Sobic005G172700--Sobic003G343200 Sobic001G137400 Sobic001G137400 Sobic005G172700--Sobic001G137400 Sobic007G056900 Sobic007G056900 Sobic005G172700--Sobic007G056900 Sobic003G343200--Sobic010G222800 Sobic010G257500 Sobic010G257500 Sobic003G343200--Sobic010G257500 Sobic002G271400 Sobic002G271400 Sobic003G343200--Sobic002G271400 Sobic001G534400 Sobic001G534400 Sobic003G343200--Sobic001G534400 Sobic003G411700 Sobic003G411700 Sobic003G343200--Sobic003G411700 Sobic004G014100 Sobic004G014100 Sobic003G343200--Sobic004G014100 Sobic003G343200--Sobic003G289700 Sobic004G306100 Sobic004G306100 Sobic003G343200--Sobic004G306100 Sobic010G024000 Sobic010G024000 Sobic003G343200--Sobic010G024000 Sobic010G222800--Sobic003G343200 Sobic010G222800--Sobic010G024000 Sobic010G222800--Sobic003G411700 Sobic002G112000 Sobic002G112000 Sobic010G222800--Sobic002G112000 Sobic008G070700 Sobic008G070700 Sobic010G222800--Sobic008G070700 Sobic010G222800--Sobic002G271400 Sobic007G076200 Sobic007G076200 Sobic010G222800--Sobic007G076200 Sobic003G423800 Sobic003G423800 Sobic010G222800--Sobic003G423800 Sobic008G131900 Sobic008G131900 Sobic010G222800--Sobic008G131900 Sobic010G237800--Sobic003G289700 Sobic010G237800--Sobic008G070700 Sobic001G158300 Sobic001G158300 Sobic010G237800--Sobic001G158300 Sobic010G237800--Sobic006G106200 Sobic003G013800 Sobic003G013800 Sobic010G237800--Sobic003G013800 Sobic002G374200 Sobic002G374200 Sobic010G237800--Sobic002G374200 Sobic010G212700 Sobic010G212700 Sobic010G237800--Sobic010G212700 Sobic007G153700 Sobic007G153700 Sobic010G237800--Sobic007G153700 Sobic002G196500 Sobic002G196500 Sobic010G237800--Sobic002G196500 Sobic003G320100--Sobic003G289700 Sobic010G030000 Sobic010G030000 Sobic003G320100--Sobic010G030000 Sobic003G320100--Sobic009G138300 Sobic003G320100--Sobic010G257500 Sobic003G216600 Sobic003G216600 Sobic003G320100--Sobic003G216600 Sobic006G106600 Sobic006G106600 Sobic003G320100--Sobic006G106600 Sobic003G320100--Sobic003G343200 Sobic003G320100--Sobic010G222800 Sobic001G486600 Sobic001G486600 Sobic003G320100--Sobic001G486600 Sobic001G211500 Sobic001G211500 Sobic006G106200--Sobic001G211500 Sobic006G106200--Sobic008G070700 Sobic006G106200--Sobic010G222800 Sobic003G072500 Sobic003G072500 Sobic006G106200--Sobic003G072500 Sobic006G106200--Sobic003G289700 Sobic004G149400 Sobic004G149400 Sobic006G106200--Sobic004G149400 Sobic001G005800 Sobic001G005800 Sobic006G106200--Sobic001G005800 Sobic009G216500 Sobic009G216500 Sobic006G106200--Sobic009G216500 Sobic006G106200--Sobic002G112000 Sobic009G138300--Sobic010G243100 Sobic004G328300 Sobic004G328300 Sobic009G138300--Sobic004G328300 Sobic010G009700 Sobic010G009700 Sobic009G138300--Sobic010G009700 Sobic009G138300--Sobic003G289700 Sobic006G236800 Sobic006G236800 Sobic009G138300--Sobic006G236800 Sobic009G136000 Sobic009G136000 Sobic009G138300--Sobic009G136000 Sobic009G138300--Sobic003G320100 Sobic001G248400 Sobic001G248400 Sobic009G138300--Sobic001G248400 Sobic009G138300--Sobic010G030000 Sobic010G243100--Sobic009G138300 Sobic010G243100--Sobic010G030000 Sobic010G243100--Sobic010G009700 Sobic001G500500 Sobic001G500500 Sobic010G243100--Sobic001G500500 Sobic010G243100--Sobic003G289700 Sobic010G243100--Sobic008G180400 Sobic010G243100--Sobic009G136000 Sobic001G288000 Sobic001G288000 Sobic010G243100--Sobic001G288000 Sobic010G243100--Sobic010G222800 Sobic005G160200--Sobic004G014100 Sobic005G160200--Sobic003G411700 Sobic005G160200--Sobic003G343200 Sobic006G091850 Sobic006G091850 Sobic005G160200--Sobic006G091850 Sobic002G315100 Sobic002G315100 Sobic005G160200--Sobic002G315100 Sobic010G038900 Sobic010G038900 Sobic005G160200--Sobic010G038900 Sobic005G160200--Sobic010G257500 Sobic005G160200--Sobic001G534400 Sobic004G350200 Sobic004G350200 Sobic005G160200--Sobic004G350200
Octagon: transcription factors


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