Gene annotation
Transcriptome id Sobic.001G496600.3,Sobic.001G496600.5,Sobic.001G496600.2,Sobic.001G496600.4,Sobic.001G496600.1
Synonym SHA, ATSHA, STATLA
Functional annotation expressed protein
UniProt A0A1Z5SB99 , A0A1B6QQG0 , A0A1B6QQD7 , A0A1Z5SB91 , A0A1Z5SBF4
Pfam -
Panther DB PTHR11801
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007165; signal transduction GO:0006355regulation of transcription, DNA-templated GO:0005634nucleus GO:0004871obsolete signal transducer activity GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G17040 : SH2 domain protein A,SH2 domain protein B
RAP-DB (Rice) LOC_Os10g41770.1 : expressed protein
MaizeGDB (Corn) Zm00025a000759
Brachypodium -
Barley HORVU1Hr1G054620.2 , HORVU1Hr1G054620.3 , HORVU1Hr1G054620.1 , HORVU1Hr1G054620.6 , HORVU1Hr1G054620.7 , HORVU1Hr1G054620.4 , HORVU1Hr1G054620.5 , HORVU1Hr1G054620.8 , HORVU1Hr1G054620.9 , HORVU1Hr1G054620.25 , HORVU1Hr1G054620.24 , HORVU1Hr1G054620.27 , HORVU1Hr1G054620.26 , HORVU1Hr1G054620.21 , HORVU1Hr1G054620.20 , HORVU1Hr1G054620.23 , HORVU1Hr1G054620.22 , HORVU1Hr1G054620.10 , HORVU1Hr1G054620.11 , HORVU1Hr1G054620.12 , HORVU1Hr1G054620.13 , HORVU1Hr1G054620.14 , HORVU1Hr1G054620.15 , HORVU1Hr1G054620.16 , HORVU1Hr1G054620.17 , HORVU1Hr1G054620.18 , HORVU1Hr1G054620.19
Wheat -
Populus -


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cDNA sequences
Sobic.001G496600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G289700 ulp1 protease family protein, putative, expressed K16287: ubiquitin-like-specific protease 1C/D
2 Sobic.003G343200 outer membrane protein, OMP85 family protein, expressed K07277: SAM50, TOB55, outer membrane protein insertion porin family
3 Sobic.003G320100 pentatricopeptide containing protein, putative, expressed -
4 Sobic.010G257500 expressed protein -
5 Sobic.010G222800 expressed protein -
6 Sobic.002G377200 expressed protein -
7 Sobic.002G123600 expressed protein -
8 Sobic.008G180200 expressed protein -
9 Sobic.008G078000 EDM2, putative, expressed -
10 Sobic.002G286632 - -
11 Sobic.003G423800 endonuclease, putative, expressed K08991: crossover junction endonuclease MUS81
12 Sobic.010G038900 expressed protein -
13 Sobic.005G034200 OsFBX114 - F-box domain containing protein, expressed -
14 Sobic.008G087200 argonaute, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
15 Sobic.002G274700 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
16 Sobic.006G127200 kelch repeat protein, putative, expressed -
17 Sobic.004G000400 OsPDIL1-4 protein disulfide isomerase PDIL1-4, expressed K09580: PDIA1, protein disulfide-isomerase A1
18 Sobic.005G160200 sialyltransferase family domain containing protein, expressed -
19 Sobic.003G119900 inositol-1-monophosphatase, putative, expressed K18649: inositol-phosphate phosphatase / L-galactose 1-phosphate phosphatase / histidinol-phosphatase
20 Sobic.008G175400 U-box domain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G496600 Sobic001G496600 Sobic003G289700 Sobic003G289700 Sobic001G496600--Sobic003G289700 Sobic003G343200 Sobic003G343200 Sobic001G496600--Sobic003G343200 Sobic003G320100 Sobic003G320100 Sobic001G496600--Sobic003G320100 Sobic010G257500 Sobic010G257500 Sobic001G496600--Sobic010G257500 Sobic010G222800 Sobic010G222800 Sobic001G496600--Sobic010G222800 Sobic002G377200 Sobic002G377200 Sobic001G496600--Sobic002G377200 Sobic002G123600 Sobic002G123600 Sobic001G496600--Sobic002G123600 Sobic008G180200 Sobic008G180200 Sobic001G496600--Sobic008G180200 Sobic008G078000 Sobic008G078000 Sobic001G496600--Sobic008G078000 Sobic005G172700 Sobic005G172700 Sobic003G289700--Sobic005G172700 Sobic003G289700--Sobic003G343200 Sobic003G289700--Sobic010G222800 Sobic010G237800 Sobic010G237800 Sobic003G289700--Sobic010G237800 Sobic003G289700--Sobic003G320100 Sobic006G106200 Sobic006G106200 Sobic003G289700--Sobic006G106200 Sobic009G138300 Sobic009G138300 Sobic003G289700--Sobic009G138300 Sobic010G243100 Sobic010G243100 Sobic003G289700--Sobic010G243100 Sobic005G160200 Sobic005G160200 Sobic003G289700--Sobic005G160200 Sobic003G343200--Sobic010G222800 Sobic003G343200--Sobic010G257500 Sobic002G271400 Sobic002G271400 Sobic003G343200--Sobic002G271400 Sobic001G534400 Sobic001G534400 Sobic003G343200--Sobic001G534400 Sobic003G411700 Sobic003G411700 Sobic003G343200--Sobic003G411700 Sobic004G014100 Sobic004G014100 Sobic003G343200--Sobic004G014100 Sobic003G343200--Sobic003G289700 Sobic004G306100 Sobic004G306100 Sobic003G343200--Sobic004G306100 Sobic010G024000 Sobic010G024000 Sobic003G343200--Sobic010G024000 Sobic003G320100--Sobic003G289700 Sobic010G030000 Sobic010G030000 Sobic003G320100--Sobic010G030000 Sobic003G320100--Sobic009G138300 Sobic003G320100--Sobic010G257500 Sobic003G216600 Sobic003G216600 Sobic003G320100--Sobic003G216600 Sobic006G106600 Sobic006G106600 Sobic003G320100--Sobic006G106600 Sobic003G320100--Sobic003G343200 Sobic003G320100--Sobic010G222800 Sobic001G486600 Sobic001G486600 Sobic003G320100--Sobic001G486600 Sobic010G009600 Sobic010G009600 Sobic010G257500--Sobic010G009600 Sobic010G257500--Sobic003G343200 Sobic010G257500--Sobic001G534400 Sobic006G127200 Sobic006G127200 Sobic010G257500--Sobic006G127200 Sobic010G013400 Sobic010G013400 Sobic010G257500--Sobic010G013400 Sobic010G018900 Sobic010G018900 Sobic010G257500--Sobic010G018900 Sobic010G257500--Sobic002G271400 Sobic010G257500--Sobic004G014100 Sobic010G038900 Sobic010G038900 Sobic010G257500--Sobic010G038900 Sobic010G222800--Sobic003G343200 Sobic010G222800--Sobic010G024000 Sobic010G222800--Sobic003G411700 Sobic002G112000 Sobic002G112000 Sobic010G222800--Sobic002G112000 Sobic008G070700 Sobic008G070700 Sobic010G222800--Sobic008G070700 Sobic010G222800--Sobic002G271400 Sobic007G076200 Sobic007G076200 Sobic010G222800--Sobic007G076200 Sobic003G423800 Sobic003G423800 Sobic010G222800--Sobic003G423800 Sobic008G131900 Sobic008G131900 Sobic010G222800--Sobic008G131900 Sobic010G153400 Sobic010G153400 Sobic002G377200--Sobic010G153400 Sobic002G392400 Sobic002G392400 Sobic002G377200--Sobic002G392400 Sobic002G193500 Sobic002G193500 Sobic002G377200--Sobic002G193500 Sobic001G440000 Sobic001G440000 Sobic002G377200--Sobic001G440000 Sobic008G050700 Sobic008G050700 Sobic002G377200--Sobic008G050700 Sobic002G274700 Sobic002G274700 Sobic002G377200--Sobic002G274700 Sobic002G239400 Sobic002G239400 Sobic002G377200--Sobic002G239400 Sobic003G293400 Sobic003G293400 Sobic002G377200--Sobic003G293400 Sobic001G143900 Sobic001G143900 Sobic002G377200--Sobic001G143900 Sobic002G123600--Sobic006G127200 Sobic008G090400 Sobic008G090400 Sobic002G123600--Sobic008G090400 Sobic002G123600--Sobic004G306100 Sobic002G095300 Sobic002G095300 Sobic002G123600--Sobic002G095300 Sobic002G123600--Sobic002G271400 Sobic003G397100 Sobic003G397100 Sobic002G123600--Sobic003G397100 Sobic001G242300 Sobic001G242300 Sobic002G123600--Sobic001G242300 Sobic002G123600--Sobic003G411700 Sobic004G129500 Sobic004G129500 Sobic002G123600--Sobic004G129500 Sobic008G180200--Sobic003G423800 Sobic008G180400 Sobic008G180400 Sobic008G180200--Sobic008G180400 Sobic003G005500 Sobic003G005500 Sobic008G180200--Sobic003G005500 Sobic002G286632 Sobic002G286632 Sobic008G180200--Sobic002G286632 Sobic008G180200--Sobic003G216600 Sobic010G009700 Sobic010G009700 Sobic008G180200--Sobic010G009700 Sobic008G180200--Sobic010G030000 Sobic006G081700 Sobic006G081700 Sobic008G180200--Sobic006G081700 Sobic007G014100 Sobic007G014100 Sobic008G180200--Sobic007G014100 Sobic001G465500 Sobic001G465500 Sobic008G078000--Sobic001G465500 Sobic005G017000 Sobic005G017000 Sobic008G078000--Sobic005G017000 Sobic003G331000 Sobic003G331000 Sobic008G078000--Sobic003G331000 Sobic008G078000--Sobic003G343200 Sobic008G078000--Sobic005G160200 Sobic008G078000--Sobic002G123600 Sobic004G118800 Sobic004G118800 Sobic008G078000--Sobic004G118800 Sobic008G078000--Sobic010G222800 Sobic002G239601 Sobic002G239601 Sobic008G078000--Sobic002G239601
Octagon: transcription factors


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